Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:09:22 (297612): wrapper (7.7.26015): starting
07:09:22 (297612): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 07:09:22] Arguments: --nthreads 3
[2025-12-17 07:09:22] Threads: 3
[2025-12-17 07:09:22] Checking for CVMFS
[2025-12-17 07:09:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 07:09:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 07:09:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 07:09:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 07:09:22] 2.9.2.0 3010767 5686 88804 154101 0 57 23442533 36864001 0 130560 0 3906031 99.990 205414 14109 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 07:09:22] CVMFS is ok
[2025-12-17 07:09:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 07:09:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 07:09:22] Further information can be found at the LHC@home message board.
[2025-12-17 07:09:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 07:09:22] Checking for apptainer binary...
[2025-12-17 07:09:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 07:09:22] Running /usr/bin/apptainer --version
[2025-12-17 07:09:22] apptainer version 1.4.1-1.1
[2025-12-17 07:09:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 07:09:22] thA367a
[2025-12-17 07:09:22] apptainer works
[2025-12-17 07:09:22] Set ATHENA_PROC_NUMBER=3
[2025-12-17 07:09:22] Set ATHENA_CORE_NUMBER=3
[2025-12-17 07:09:22] Starting ATLAS job with PandaID=6930761555
[2025-12-17 07:09:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 08:38:51]  *** The last 200 lines of the pilot log: ***
[2025-12-17 08:38:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-17 08:38:51]  replicas=None
[2025-12-17 08:38:51]  scope=mc23_13p6TeV
[2025-12-17 08:38:51]  status=None
[2025-12-17 08:38:51]  status_code=0
[2025-12-17 08:38:51]  storage_token=
[2025-12-17 08:38:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6930761555/log.47886831._012562.job.log.tgz.1
[2025-12-17 08:38:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/0c/log.47886831._012562.job.log.tgz.1
[2025-12-17 08:38:51]  workdir=None
[2025-12-17 08:38:51] ]
[2025-12-17 08:38:51] 2025-12-17 07:38:22,482 | INFO     | transferring file log.47886831._012562.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6930761555/log.47886831._012562.job.log.tgz.1 to /local/data/boinc/
[2025-12-17 08:38:51] 2025-12-17 07:38:22,482 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6930761555/log.47886831._012562.job.log.tgz.1 /local/data/boinc/slots/0/log.47886831._0125
[2025-12-17 08:38:51] 2025-12-17 07:38:22,494 | INFO     | adding to output.list: log.47886831._012562.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/0c/log.47886831._012562.job.log.tg
[2025-12-17 08:38:51] 2025-12-17 07:38:22,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 08:38:51] 2025-12-17 07:38:22,494 | INFO     | summary of transferred files:
[2025-12-17 08:38:51] 2025-12-17 07:38:22,494 | INFO     |  -- lfn=log.47886831._012562.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 08:38:51] 2025-12-17 07:38:22,494 | INFO     | stage-out finished correctly
[2025-12-17 08:38:51] 2025-12-17 07:38:22,993 | INFO     | time since job start (5334s) is within the limit (174528.0s)
[2025-12-17 08:38:51] 2025-12-17 07:38:24,999 | INFO     | time since job start (5336s) is within the limit (174528.0s)
[2025-12-17 08:38:51] 2025-12-17 07:38:25,967 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 08:38:51] 2025-12-17 07:38:25,995 | INFO     | job 6930761555 has state=finished
[2025-12-17 08:38:51] 2025-12-17 07:38:25,995 | INFO     | preparing for final server update for job 6930761555 in state='finished'
[2025-12-17 08:38:51] 2025-12-17 07:38:25,995 | INFO     | this job has now completed (state=finished)
[2025-12-17 08:38:51] 2025-12-17 07:38:25,995 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 08:38:51] 2025-12-17 07:38:25,995 | INFO     | log transfer has been attempted: DONE
[2025-12-17 08:38:51] 2025-12-17 07:38:25,996 | INFO     | job 6930761555 has finished - writing final server update
[2025-12-17 08:38:51] 2025-12-17 07:38:25,996 | INFO     | total number of processed events: 400 (read)
[2025-12-17 08:38:51] 2025-12-17 07:38:25,996 | INFO     | executing command: lscpu
[2025-12-17 08:38:51] 2025-12-17 07:38:26,009 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 08:38:51] 2025-12-17 07:38:26,023 | WARNING  | process 307779 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 08:38:51] 2025-12-17 07:38:26,024 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6930761555/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 08:38:51] 2025-12-17 07:38:26,076 | INFO     | number of running child processes to parent process 307779: 1
[2025-12-17 08:38:51] 2025-12-17 07:38:26,076 | INFO     | maximum number of monitored processes: 6
[2025-12-17 08:38:51] 2025-12-17 07:38:27,004 | INFO     | time since job start (5339s) is within the limit (174528.0s)
[2025-12-17 08:38:51] 2025-12-17 07:38:28,579 | INFO     | monitor loop #410: job 0:6930761555 is in state 'finished'
[2025-12-17 08:38:51] 2025-12-17 07:38:28,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 08:38:51] 2025-12-17 07:38:29,009 | INFO     | time since job start (5341s) is within the limit (174528.0s)
[2025-12-17 08:38:51] 2025-12-17 07:38:30,837 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 08:38:51] 2025-12-17 07:38:30,838 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3901.9339999999997
[2025-12-17 08:38:51] 2025-12-17 07:38:30,839 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6930761555/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 08:38:51] 2025-12-17 07:38:30,839 | INFO     | extracted standard info from prmon json
[2025-12-17 08:38:51] 2025-12-17 07:38:30,839 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 08:38:51] 2025-12-17 07:38:30,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 08:38:51] 2025-12-17 07:38:30,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 08:38:51] 2025-12-17 07:38:30,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 08:38:51] 2025-12-17 07:38:30,840 | INFO     | fitting pss+swap vs Time
[2025-12-17 08:38:51] 2025-12-17 07:38:30,840 | INFO     | sum of square deviations: 164765880.0
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | sum of deviations: 591994752.0
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | mean x: 1765954532.0
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | mean y: 2338528.8024691357
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | intersect: -6342639055.237479
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | chi2: 0.0007366723765470496
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | current memory leak: 3.59 B/s (using 81 data points, chi2=0.00)
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | could have reported an average CPU frequency of 3853 MHz (6 samples)
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | ..............................
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . Timing measurements:
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . get job = 0 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . initial setup = 1 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . payload setup = 2 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . stage-in = 0 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . payload execution = 5314 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . stage-out = 0 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | . log creation = 0 s
[2025-12-17 08:38:51] 2025-12-17 07:38:30,841 | INFO     | ..............................
[2025-12-17 08:38:51] 2025-12-17 07:38:31,015 | INFO     | time since job start (5343s) is within the limit (174528.0s)
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | 
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | job summary report
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | --------------------------------------------------
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | PanDA job id: 6930761555
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | task id: 47886831
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | errors: (none)
[2025-12-17 08:38:51] 2025-12-17 07:38:31,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | pilot state: finished 
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | transexitcode: 0
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | exeerrorcode: 0
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | exeerrordiag: 
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | exitcode: 0
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | exitmsg: OK
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | cpuconsumptiontime: 15265 s
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | nevents: 400
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | neventsw: 0
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | pid: 307779
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | pgrp: 307779
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | corecount: 3
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | event service: False
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | sizes: {0: 2283996, 2: 2284258, 10: 2284286, 5320: 2310954, 5321: 2319958, 5325: 2320014, 5329: 2320336}
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | --------------------------------------------------
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | 
[2025-12-17 08:38:51] 2025-12-17 07:38:31,285 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-17 08:38:51] 2025-12-17 07:38:31,299 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | job 6930761555 has completed (purged errors)
[2025-12-17 08:38:51] 2025-12-17 07:38:31,300 | INFO     | overall cleanup function is called
[2025-12-17 08:38:51] 2025-12-17 07:38:32,307 | INFO     | --- collectZombieJob: --- 10, [307779]
[2025-12-17 08:38:51] 2025-12-17 07:38:32,307 | INFO     | zombie collector waiting for pid 307779
[2025-12-17 08:38:51] 2025-12-17 07:38:32,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 08:38:51] 2025-12-17 07:38:32,307 | INFO     | collected zombie processes
[2025-12-17 08:38:51] 2025-12-17 07:38:32,307 | INFO     | will attempt to kill all subprocesses of pid=307779
[2025-12-17 08:38:51] 2025-12-17 07:38:32,350 | INFO     | process IDs to be killed: [307779] (in reverse order)
[2025-12-17 08:38:51] 2025-12-17 07:38:32,373 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 08:38:51] 2025-12-17 07:38:32,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 08:38:51] 2025-12-17 07:38:32,374 | INFO     | did not find any defunct processes belonging to 307779
[2025-12-17 08:38:51] 2025-12-17 07:38:32,375 | INFO     | did not find any defunct processes belonging to 307779
[2025-12-17 08:38:51] 2025-12-17 07:38:32,376 | INFO     | ready for new job
[2025-12-17 08:38:51] 2025-12-17 07:38:32,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 08:38:51] 2025-12-17 07:38:32,376 | INFO     | ***************************************
[2025-12-17 08:38:51] 2025-12-17 07:38:32,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 08:38:51] 2025-12-17 07:38:32,377 | INFO     | ***************************************
[2025-12-17 08:38:51] 2025-12-17 07:38:32,377 | INFO     | 
[2025-12-17 08:38:51] 2025-12-17 07:38:32,377 | INFO     | architecture information:
[2025-12-17 08:38:51] 2025-12-17 07:38:32,377 | INFO     | executing command: cat /etc/os-release
[2025-12-17 08:38:51] 2025-12-17 07:38:32,385 | INFO     | cat /etc/os-release:
[2025-12-17 08:38:51] NAME="CentOS Linux"
[2025-12-17 08:38:51] VERSION="7 (Core)"
[2025-12-17 08:38:51] ID="centos"
[2025-12-17 08:38:51] ID_LIKE="rhel fedora"
[2025-12-17 08:38:51] VERSION_ID="7"
[2025-12-17 08:38:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 08:38:51] ANSI_COLOR="0;31"
[2025-12-17 08:38:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 08:38:51] HOME_URL="https://www.centos.org/"
[2025-12-17 08:38:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 08:38:51] 
[2025-12-17 08:38:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 08:38:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 08:38:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 08:38:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 08:38:51] 
[2025-12-17 08:38:51] 2025-12-17 07:38:32,385 | INFO     | ***************************************
[2025-12-17 08:38:51] 2025-12-17 07:38:32,889 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 08:38:51] 2025-12-17 07:38:32,901 | INFO     | sufficient remaining disk space (236695060480 B)
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | INFO     | update_server=False
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 08:38:51] 2025-12-17 07:38:32,902 | INFO     | aborting loop
[2025-12-17 08:38:51] 2025-12-17 07:38:32,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 08:38:51] 2025-12-17 07:38:32,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 08:38:51] 2025-12-17 07:38:33,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 08:38:51] 2025-12-17 07:38:33,164 | INFO     | [monitor] cgroup control has ended
[2025-12-17 08:38:51] 2025-12-17 07:38:33,664 | INFO     | all data control threads have been joined
[2025-12-17 08:38:51] 2025-12-17 07:38:33,907 | INFO     | [job] retrieve thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:33,908 | INFO     | [job] job monitor thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:33,920 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:34,016 | INFO     | all payload control threads have been joined
[2025-12-17 08:38:51] 2025-12-17 07:38:34,200 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:34,567 | INFO     | all job control threads have been joined
[2025-12-17 08:38:51] 2025-12-17 07:38:34,670 | INFO     | [data] control thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:34,776 | INFO     | [data] copytool_in thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:34,851 | INFO     | [payload] failed_post thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,022 | INFO     | [payload] control thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,044 | INFO     | [data] copytool_out thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,276 | INFO     | [job] validate thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,357 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,365 | INFO     | [payload] validate_post thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,573 | INFO     | [job] control thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:35,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 08:38:51] 2025-12-17 07:38:36,888 | INFO     | [job] queue monitor thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:36,909 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:43,600 | INFO     | job.realtimelogging is not enabled
[2025-12-17 08:38:51] 2025-12-17 07:38:44,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 08:38:51] 2025-12-17 07:38:46,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482450052928)>', '<ExcThread(monitor, started 140482097161984)>']
[2025-12-17 08:38:51] 2025-12-17 07:38:46,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 08:38:51] 2025-12-17 07:38:46,971 | INFO     | [monitor] control thread has ended
[2025-12-17 08:38:51] 2025-12-17 07:38:51,169 | INFO     | all workflow threads have been joined
[2025-12-17 08:38:51] 2025-12-17 07:38:51,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 08:38:51] 2025-12-17 07:38:51,169 | INFO     | traces error code: 0
[2025-12-17 08:38:51] 2025-12-17 07:38:51,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 08:38:51] 2025-12-17 07:38:51,221 [wrapper] ==== pilot stdout END ====
[2025-12-17 08:38:51] 2025-12-17 07:38:51,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 08:38:51] 2025-12-17 07:38:51,226 [wrapper] pilotpid: 301340
[2025-12-17 08:38:51] 2025-12-17 07:38:51,228 [wrapper] Pilot exit status: 0
[2025-12-17 08:38:51] 2025-12-17 07:38:51,236 [wrapper] pandaids: 6930761555
[2025-12-17 08:38:51] 2025-12-17 07:38:51,252 [wrapper] cleanup supervisor_pilot  319623 301341
[2025-12-17 08:38:51] 2025-12-17 07:38:51,254 [wrapper] Test setup, not cleaning
[2025-12-17 08:38:51] 2025-12-17 07:38:51,256 [wrapper] apfmon messages muted
[2025-12-17 08:38:51] 2025-12-17 07:38:51,259 [wrapper] ==== wrapper stdout END ====
[2025-12-17 08:38:51] 2025-12-17 07:38:51,261 [wrapper] ==== wrapper stderr END ====
[2025-12-17 08:38:51]  *** Error codes and diagnostics ***
[2025-12-17 08:38:51]     "exeErrorCode": 0,
[2025-12-17 08:38:51]     "exeErrorDiag": "",
[2025-12-17 08:38:51]     "pilotErrorCode": 0,
[2025-12-17 08:38:51]     "pilotErrorDiag": "",
[2025-12-17 08:38:51]  *** Listing of results directory ***
[2025-12-17 08:38:51] total 336624
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc    579449 Dec 16 07:04 pilot3.tar.gz
[2025-12-17 08:38:51] -rwx------ 1 boinc boinc     36322 Dec 16 07:08 runpilot2-wrapper.sh
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc      5112 Dec 16 07:11 queuedata.json
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc       100 Dec 17 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 08:38:51] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 07:09 run_atlas
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc       105 Dec 17 07:09 job.xml
[2025-12-17 08:38:51] -rw-r--r-- 2 boinc boinc 192794268 Dec 17 07:09 EVNT.47886829._000515.pool.root.1
[2025-12-17 08:38:51] -rw-r--r-- 2 boinc boinc    592415 Dec 17 07:09 input.tar.gz
[2025-12-17 08:38:51] -rw-r--r-- 2 boinc boinc     15847 Dec 17 07:09 start_atlas.sh
[2025-12-17 08:38:51] drwxrwx--x 2 boinc boinc      4096 Dec 17 07:09 shared
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc         0 Dec 17 07:09 boinc_setup_complete
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc      6441 Dec 17 07:09 init_data.xml
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc         0 Dec 17 07:09 boinc_lockfile
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc      2539 Dec 17 07:09 pandaJob.out
[2025-12-17 08:38:51] -rw------- 1 boinc boinc    987409 Dec 17 07:09 agis_schedconf.cvmfs.json
[2025-12-17 08:38:51] -rw------- 1 boinc boinc   1516240 Dec 17 07:09 agis_ddmendpoints.agis.ALL.json
[2025-12-17 08:38:51] drwx------ 5 boinc boinc      4096 Dec 17 07:09 pilot3
[2025-12-17 08:38:51] -rw------- 1 boinc boinc        95 Dec 17 08:37 pilot_heartbeat.json
[2025-12-17 08:38:51] -rw------- 1 boinc boinc 145903315 Dec 17 08:38 HITS.47886831._012562.pool.root.1
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc       529 Dec 17 08:38 boinc_task_state.xml
[2025-12-17 08:38:51] -rw------- 1 boinc boinc      1022 Dec 17 08:38 memory_monitor_summary.json
[2025-12-17 08:38:51] -rw------- 1 boinc boinc    266871 Dec 17 08:38 log.47886831._012562.job.log.tgz.1
[2025-12-17 08:38:51] -rw------- 1 boinc boinc      7757 Dec 17 08:38 heartbeat.json
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc      8192 Dec 17 08:38 boinc_mmap_file
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc        27 Dec 17 08:38 wrapper_checkpoint.txt
[2025-12-17 08:38:51] -rw------- 1 boinc boinc      4628 Dec 17 08:38 pilotlog.txt
[2025-12-17 08:38:51] -rw------- 1 boinc boinc    778259 Dec 17 08:38 log.47886831._012562.job.log.1
[2025-12-17 08:38:51] -rw------- 1 boinc boinc       357 Dec 17 08:38 output.list
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc       620 Dec 17 08:38 runtime_log
[2025-12-17 08:38:51] -rw------- 1 boinc boinc   1064960 Dec 17 08:38 result.tar.gz
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc      8902 Dec 17 08:38 runtime_log.err
[2025-12-17 08:38:51] -rw------- 1 boinc boinc       659 Dec 17 08:38 BYMKDmTPdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnGVKDmOLVofm.diag
[2025-12-17 08:38:51] -rw-r--r-- 1 boinc boinc     21831 Dec 17 08:38 stderr.txt
[2025-12-17 08:38:51] HITS file was successfully produced:
[2025-12-17 08:38:51] -rw------- 1 boinc boinc 145903315 Dec 17 08:38 shared/HITS.pool.root.1
[2025-12-17 08:38:51]  *** Contents of shared directory: ***
[2025-12-17 08:38:51] total 332404
[2025-12-17 08:38:51] -rw-r--r-- 2 boinc boinc 192794268 Dec 17 07:09 ATLAS.root_0
[2025-12-17 08:38:51] -rw-r--r-- 2 boinc boinc    592415 Dec 17 07:09 input.tar.gz
[2025-12-17 08:38:51] -rw-r--r-- 2 boinc boinc     15847 Dec 17 07:09 start_atlas.sh
[2025-12-17 08:38:51] -rw------- 1 boinc boinc 145903315 Dec 17 08:38 HITS.pool.root.1
[2025-12-17 08:38:51] -rw------- 1 boinc boinc   1064960 Dec 17 08:38 result.tar.gz
08:38:52 (297612): run_atlas exited; CPU time 15285.475904
08:38:52 (297612): called boinc_finish(0)

</stderr_txt>
]]>

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