Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:30:15 (848163): wrapper (7.7.26015): starting
13:30:15 (848163): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 13:30:15] Arguments: --nthreads 8
[2025-12-16 13:30:15] Threads: 8
[2025-12-16 13:30:15] Checking for CVMFS
[2025-12-16 13:30:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 13:30:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 13:30:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 13:30:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 13:30:17] 2.13.3.0 11830 59077 386036 154082 1 692 32327166 32935937 24558 16776704 0 316539392 99.497 398029895 32223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 13:30:17] CVMFS is ok
[2025-12-16 13:30:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 13:30:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 13:30:17] Further information can be found at the LHC@home message board.
[2025-12-16 13:30:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 13:30:17] Checking for apptainer binary...
[2025-12-16 13:30:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 13:30:17] Running /usr/bin/apptainer --version
[2025-12-16 13:30:17] apptainer version 1.4.5-2.el9
[2025-12-16 13:30:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 13:30:18] c6-8-25-1.aglt2.org
[2025-12-16 13:30:18] apptainer works
[2025-12-16 13:30:18] Set ATHENA_PROC_NUMBER=8
[2025-12-16 13:30:18] Set ATHENA_CORE_NUMBER=8
[2025-12-16 13:30:18] Starting ATLAS job with PandaID=6930760770
[2025-12-16 13:30:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 17:27:48]  *** The last 200 lines of the pilot log: ***
[2025-12-16 17:27:48] 2025-12-16 22:26:37,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 17:27:48] 2025-12-16 22:26:37,302 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 17:27:48] 2025-12-16 22:26:38,822 | INFO     | time since job start (14120s) is within the limit (174528.0s)
[2025-12-16 17:27:48] 2025-12-16 22:26:39,748 | INFO     | monitor loop #874: job 0:6930760770 is in state 'finished'
[2025-12-16 17:27:48] 2025-12-16 22:26:39,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 17:27:48] 2025-12-16 22:26:40,829 | INFO     | time since job start (14122s) is within the limit (174528.0s)
[2025-12-16 17:27:48] 2025-12-16 22:26:42,253 | INFO     | monitor loop #875: job 0:6930760770 is in state 'finished'
[2025-12-16 17:27:48] 2025-12-16 22:26:42,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 17:27:48] 2025-12-16 22:26:42,836 | INFO     | time since job start (14124s) is within the limit (174528.0s)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,301 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 17:27:48] 2025-12-16 22:26:43,307 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2601.8931354166666
[2025-12-16 17:27:48] 2025-12-16 22:26:43,324 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6930760770/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,325 | INFO     | extracted standard info from prmon json
[2025-12-16 17:27:48] 2025-12-16 22:26:43,326 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 17:27:48] 2025-12-16 22:26:43,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 17:27:48] 2025-12-16 22:26:43,326 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 17:27:48] 2025-12-16 22:26:43,326 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:27:48] 2025-12-16 22:26:43,331 | INFO     | fitting pss+swap vs Time
[2025-12-16 17:27:48] 2025-12-16 22:26:43,332 | INFO     | sum of square deviations: 3772510878.9608574
[2025-12-16 17:27:48] 2025-12-16 22:26:43,333 | INFO     | sum of deviations: 58561365566.09996
[2025-12-16 17:27:48] 2025-12-16 22:26:43,333 | INFO     | mean x: 1765916990.8130436
[2025-12-16 17:27:48] 2025-12-16 22:26:43,333 | INFO     | mean y: 2442676.7
[2025-12-16 17:27:48] 2025-12-16 22:26:43,333 | INFO     | intersect: -27410204702.298542
[2025-12-16 17:27:48] 2025-12-16 22:26:43,334 | INFO     | chi2: 3.3701493253674135
[2025-12-16 17:27:48] 2025-12-16 22:26:43,334 | INFO     | sum of square deviations: 3531793440.96001
[2025-12-16 17:27:48] 2025-12-16 22:26:43,336 | INFO     | sum of deviations: 72130360595.64003
[2025-12-16 17:27:48] 2025-12-16 22:26:43,336 | INFO     | mean x: 1765916838.32
[2025-12-16 17:27:48] 2025-12-16 22:26:43,336 | INFO     | mean y: 2451100.657777778
[2025-12-16 17:27:48] 2025-12-16 22:26:43,336 | INFO     | intersect: -36063140066.90236
[2025-12-16 17:27:48] 2025-12-16 22:26:43,336 | INFO     | chi2: 2.591905983986839
[2025-12-16 17:27:48] 2025-12-16 22:26:43,337 | INFO     | current chi2=2.591905983986839 (change=23.09225100272762 %)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,337 | INFO     | right removable region: 224
[2025-12-16 17:27:48] 2025-12-16 22:26:43,337 | INFO     | sum of square deviations: 3531749520.96001
[2025-12-16 17:27:48] 2025-12-16 22:26:43,338 | INFO     | sum of deviations: 4906305006.480013
[2025-12-16 17:27:48] 2025-12-16 22:26:43,339 | INFO     | mean x: 1765917143.32
[2025-12-16 17:27:48] 2025-12-16 22:26:43,339 | INFO     | mean y: 2476494.6044444446
[2025-12-16 17:27:48] 2025-12-16 22:26:43,339 | INFO     | intersect: -2450734886.8597455
[2025-12-16 17:27:48] 2025-12-16 22:26:43,339 | INFO     | chi2: 1.0193028315891923
[2025-12-16 17:27:48] 2025-12-16 22:26:43,339 | INFO     | current chi2=1.0193028315891923 (change=69.7549653388706 %)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,340 | INFO     | sum of square deviations: 3301467444.086367
[2025-12-16 17:27:48] 2025-12-16 22:26:43,341 | INFO     | sum of deviations: -8836895022.49091
[2025-12-16 17:27:48] 2025-12-16 22:26:43,341 | INFO     | mean x: 1765917295.8227272
[2025-12-16 17:27:48] 2025-12-16 22:26:43,341 | INFO     | mean y: 2485556.2181818183
[2025-12-16 17:27:48] 2025-12-16 22:26:43,341 | INFO     | intersect: 4729239954.338555
[2025-12-16 17:27:48] 2025-12-16 22:26:43,342 | INFO     | chi2: 0.875126644478557
[2025-12-16 17:27:48] 2025-12-16 22:26:43,342 | INFO     | current chi2=0.875126644478557 (change=14.144588108898958 %)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,342 | INFO     | left removable region: 20
[2025-12-16 17:27:48] 2025-12-16 22:26:43,342 | INFO     | sum of square deviations: 2632230524.3333464
[2025-12-16 17:27:48] 2025-12-16 22:26:43,344 | INFO     | sum of deviations: -3004317990.666667
[2025-12-16 17:27:48] 2025-12-16 22:26:43,344 | INFO     | mean x: 1765917417.8333333
[2025-12-16 17:27:48] 2025-12-16 22:26:43,344 | INFO     | mean y: 2501612.362745098
[2025-12-16 17:27:48] 2025-12-16 22:26:43,344 | INFO     | intersect: 2018046003.0927243
[2025-12-16 17:27:48] 2025-12-16 22:26:43,344 | INFO     | chi2: 0.03090749100715196
[2025-12-16 17:27:48] 2025-12-16 22:26:43,345 | INFO     | current memory leak: -1.14 B/s (using 204 data points, chi2=0.03)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,345 | INFO     | could have reported an average CPU frequency of 2612 MHz (11 samples)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | ..............................
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . Timing measurements:
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . get job = 0 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . initial setup = 6 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . payload setup = 35 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . stage-in = 0 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . payload execution = 14008 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . stage-out = 2 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | . log creation = 0 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,346 | INFO     | ..............................
[2025-12-16 17:27:48] 2025-12-16 22:26:43,446 | INFO     | 
[2025-12-16 17:27:48] 2025-12-16 22:26:43,446 | INFO     | job summary report
[2025-12-16 17:27:48] 2025-12-16 22:26:43,446 | INFO     | --------------------------------------------------
[2025-12-16 17:27:48] 2025-12-16 22:26:43,446 | INFO     | PanDA job id: 6930760770
[2025-12-16 17:27:48] 2025-12-16 22:26:43,446 | INFO     | task id: 47898782
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | errors: (none)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | pilot state: finished 
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | transexitcode: 0
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | exeerrorcode: 0
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | exeerrordiag: 
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | exitcode: 0
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | exitmsg: OK
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | cpuconsumptiontime: 56957 s
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | nevents: 400
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | neventsw: 0
[2025-12-16 17:27:48] 2025-12-16 22:26:43,447 | INFO     | pid: 861898
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | pgrp: 861898
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | corecount: 8
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | event service: False
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | sizes: {0: 2283809, 1: 2284008, 12: 2284008, 24: 2284036, 28: 2284326, 35: 2284354, 14048: 2314791, 14052: 2323789, 14053: 2323845, 14061: 2324039}
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | --------------------------------------------------
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | 
[2025-12-16 17:27:48] 2025-12-16 22:26:43,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 17:27:48] 2025-12-16 22:26:43,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 17:27:48] 2025-12-16 22:26:43,470 | INFO     | job 6930760770 has completed (purged errors)
[2025-12-16 17:27:48] 2025-12-16 22:26:43,470 | INFO     | overall cleanup function is called
[2025-12-16 17:27:48] 2025-12-16 22:26:44,481 | INFO     | --- collectZombieJob: --- 10, [861898]
[2025-12-16 17:27:48] 2025-12-16 22:26:44,482 | INFO     | zombie collector waiting for pid 861898
[2025-12-16 17:27:48] 2025-12-16 22:26:44,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 17:27:48] 2025-12-16 22:26:44,482 | INFO     | collected zombie processes
[2025-12-16 17:27:48] 2025-12-16 22:26:44,482 | INFO     | will attempt to kill all subprocesses of pid=861898
[2025-12-16 17:27:48] 2025-12-16 22:26:44,916 | INFO     | process IDs to be killed: [861898] (in reverse order)
[2025-12-16 17:27:48] 2025-12-16 22:26:45,093 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 17:27:48] 2025-12-16 22:26:45,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 17:27:48] 2025-12-16 22:26:45,114 | INFO     | did not find any defunct processes belonging to 861898
[2025-12-16 17:27:48] 2025-12-16 22:26:45,133 | INFO     | did not find any defunct processes belonging to 861898
[2025-12-16 17:27:48] 2025-12-16 22:26:45,133 | INFO     | ready for new job
[2025-12-16 17:27:48] 2025-12-16 22:26:45,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 17:27:48] 2025-12-16 22:26:45,136 | INFO     | ***************************************
[2025-12-16 17:27:48] 2025-12-16 22:26:45,136 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 17:27:48] 2025-12-16 22:26:45,136 | INFO     | ***************************************
[2025-12-16 17:27:48] 2025-12-16 22:26:45,136 | INFO     | 
[2025-12-16 17:27:48] 2025-12-16 22:26:45,142 | INFO     | architecture information:
[2025-12-16 17:27:48] 2025-12-16 22:26:45,142 | INFO     | executing command: cat /etc/os-release
[2025-12-16 17:27:48] 2025-12-16 22:26:45,201 | INFO     | cat /etc/os-release:
[2025-12-16 17:27:48] NAME="CentOS Linux"
[2025-12-16 17:27:48] VERSION="7 (Core)"
[2025-12-16 17:27:48] ID="centos"
[2025-12-16 17:27:48] ID_LIKE="rhel fedora"
[2025-12-16 17:27:48] VERSION_ID="7"
[2025-12-16 17:27:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 17:27:48] ANSI_COLOR="0;31"
[2025-12-16 17:27:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 17:27:48] HOME_URL="https://www.centos.org/"
[2025-12-16 17:27:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 17:27:48] 
[2025-12-16 17:27:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 17:27:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 17:27:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 17:27:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 17:27:48] 
[2025-12-16 17:27:48] 2025-12-16 22:26:45,201 | INFO     | ***************************************
[2025-12-16 17:27:48] 2025-12-16 22:26:45,704 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 17:27:48] 2025-12-16 22:26:45,735 | INFO     | sufficient remaining disk space (74010591232 B)
[2025-12-16 17:27:48] 2025-12-16 22:26:45,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 17:27:48] 2025-12-16 22:26:45,735 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 17:27:48] 2025-12-16 22:26:45,735 | INFO     | update_server=False
[2025-12-16 17:27:48] 2025-12-16 22:26:45,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 17:27:48] 2025-12-16 22:26:45,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:27:48] 2025-12-16 22:26:45,765 | INFO     | aborting loop
[2025-12-16 17:27:48] 2025-12-16 22:26:45,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 17:27:48] 2025-12-16 22:26:46,650 | INFO     | all data control threads have been joined
[2025-12-16 17:27:48] 2025-12-16 22:26:46,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 17:27:48] 2025-12-16 22:26:46,740 | INFO     | [job] retrieve thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:46,771 | INFO     | [job] job monitor thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:46,866 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:46,940 | INFO     | [payload] validate_post thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:47,065 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:47,092 | INFO     | [job] validate thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:47,114 | INFO     | all payload control threads have been joined
[2025-12-16 17:27:48] 2025-12-16 22:26:47,176 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:47,447 | INFO     | all job control threads have been joined
[2025-12-16 17:27:48] 2025-12-16 22:26:47,654 | INFO     | [data] control thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:47,691 | INFO     | [payload] failed_post thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:47,692 | INFO     | [data] copytool_in thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:48,120 | INFO     | [payload] control thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:48,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:48,453 | INFO     | [job] control thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:48,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:27:48] 2025-12-16 22:26:48,713 | INFO     | [data] copytool_out thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:49,464 | INFO     | [job] queue monitor thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:26:49,774 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 17:27:48] 2025-12-16 22:27:16,527 | INFO     | PID=852747 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 17:27:48] 2025-12-16 22:27:16,527 | INFO     | .. there are 25 such processes running
[2025-12-16 17:27:48] 2025-12-16 22:27:16,528 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 17:27:48] 2025-12-16 22:27:16,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 17:27:48] 2025-12-16 22:27:16,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 17:27:48] 2025-12-16 22:27:42,441 | INFO     | [monitor] cgroup control has ended
[2025-12-16 17:27:48] 2025-12-16 22:27:43,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141157246784)>', '<ExcThread(monitor, started 140140068460288)>']
[2025-12-16 17:27:48] 2025-12-16 22:27:43,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 17:27:48] 2025-12-16 22:27:43,690 | INFO     | [monitor] control thread has ended
[2025-12-16 17:27:48] 2025-12-16 22:27:48,207 | INFO     | all workflow threads have been joined
[2025-12-16 17:27:48] 2025-12-16 22:27:48,207 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 17:27:48] 2025-12-16 22:27:48,207 | INFO     | traces error code: 0
[2025-12-16 17:27:48] 2025-12-16 22:27:48,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 17:27:48] 2025-12-16 22:27:48,501 [wrapper] ==== pilot stdout END ====
[2025-12-16 17:27:48] 2025-12-16 22:27:48,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 17:27:48] 2025-12-16 22:27:48,532 [wrapper] pilotpid: 852747
[2025-12-16 17:27:48] 2025-12-16 22:27:48,535 [wrapper] Pilot exit status: 0
[2025-12-16 17:27:48] 2025-12-16 22:27:48,575 [wrapper] pandaids: 6930760770
[2025-12-16 17:27:48] 2025-12-16 22:27:48,675 [wrapper] cleanup supervisor_pilot 1629966 852748
[2025-12-16 17:27:48] 2025-12-16 22:27:48,682 [wrapper] Test setup, not cleaning
[2025-12-16 17:27:48] 2025-12-16 22:27:48,685 [wrapper] apfmon messages muted
[2025-12-16 17:27:48] 2025-12-16 22:27:48,688 [wrapper] ==== wrapper stdout END ====
[2025-12-16 17:27:48] 2025-12-16 22:27:48,692 [wrapper] ==== wrapper stderr END ====
[2025-12-16 17:27:48]  *** Error codes and diagnostics ***
[2025-12-16 17:27:48]     "exeErrorCode": 0,
[2025-12-16 17:27:48]     "exeErrorDiag": "",
[2025-12-16 17:27:48]     "pilotErrorCode": 0,
[2025-12-16 17:27:48]     "pilotErrorDiag": "",
[2025-12-16 17:27:48]  *** Listing of results directory ***
[2025-12-16 17:27:48] total 405452
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 01:04 pilot3.tar.gz
[2025-12-16 17:27:48] -rwx------. 1 boincer umatlas     36322 Dec 16 01:05 runpilot2-wrapper.sh
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 01:07 queuedata.json
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas       100 Dec 16 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 17:27:48] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 13:30 run_atlas
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas       105 Dec 16 13:30 job.xml
[2025-12-16 17:27:48] -rw-r--r--. 2 boincer umatlas 216488329 Dec 16 13:30 EVNT.47898779._000204.pool.root.1
[2025-12-16 17:27:48] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 13:30 start_atlas.sh
[2025-12-16 17:27:48] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 13:30 shared
[2025-12-16 17:27:48] -rw-r--r--. 2 boincer umatlas    592392 Dec 16 13:30 input.tar.gz
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas         0 Dec 16 13:30 boinc_lockfile
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas      2522 Dec 16 13:30 pandaJob.out
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas        57 Dec 16 13:30 setup.sh.local
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas    987409 Dec 16 13:31 agis_schedconf.cvmfs.json
[2025-12-16 17:27:48] drwx------. 5 boincer umatlas      4096 Dec 16 13:31 pilot3
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas      6877 Dec 16 17:19 init_data.xml
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas 190267113 Dec 16 17:25 HITS.47898782._005018.pool.root.1
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas       531 Dec 16 17:25 boinc_task_state.xml
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas      1044 Dec 16 17:26 memory_monitor_summary.json
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas   1516240 Dec 16 17:26 agis_ddmendpoints.agis.ALL.json
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas    453159 Dec 16 17:26 log.47898782._005018.job.log.tgz.1
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas      7822 Dec 16 17:26 heartbeat.json
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas        95 Dec 16 17:27 pilot_heartbeat.json
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 17:27 boinc_mmap_file
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas        28 Dec 16 17:27 wrapper_checkpoint.txt
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas      4823 Dec 16 17:27 pilotlog.txt
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas   1802754 Dec 16 17:27 log.47898782._005018.job.log.1
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas       357 Dec 16 17:27 output.list
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas       620 Dec 16 17:27 runtime_log
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas   2273280 Dec 16 17:27 result.tar.gz
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 17:27 runtime_log.err
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas       657 Dec 16 17:27 CwiNDmFNdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1aZKDm3UWfKo.diag
[2025-12-16 17:27:48] -rw-r--r--. 1 boincer umatlas     21512 Dec 16 17:27 stderr.txt
[2025-12-16 17:27:48] HITS file was successfully produced:
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas 190267113 Dec 16 17:25 shared/HITS.pool.root.1
[2025-12-16 17:27:48]  *** Contents of shared directory: ***
[2025-12-16 17:27:48] total 400048
[2025-12-16 17:27:48] -rw-r--r--. 2 boincer umatlas 216488329 Dec 16 13:30 ATLAS.root_0
[2025-12-16 17:27:48] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 13:30 start_atlas.sh
[2025-12-16 17:27:48] -rw-r--r--. 2 boincer umatlas    592392 Dec 16 13:30 input.tar.gz
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas 190267113 Dec 16 17:25 HITS.pool.root.1
[2025-12-16 17:27:48] -rw-------. 1 boincer umatlas   2273280 Dec 16 17:27 result.tar.gz
17:27:50 (848163): run_atlas exited; CPU time 57620.585193
17:27:50 (848163): called boinc_finish(0)

</stderr_txt>
]]>

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