Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-17 15:52:32 (5560): vboxwrapper version 26210
2025-12-17 15:52:32 (5560): BOINC client version: 8.2.8
2025-12-17 15:52:33 (5560): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-12-17 15:52:33 (5560): Successfully copied 'init_data.xml' to the shared directory.
2025-12-17 15:52:33 (5560): Create VM. (boinc_98552cae49420a4e, slot#0)
2025-12-17 15:52:34 (5560): Setting Memory Size for VM. (4600MB)
2025-12-17 15:52:34 (5560): Setting CPU Count for VM. (6)
2025-12-17 15:52:34 (5560): Setting Chipset Options for VM.
2025-12-17 15:52:35 (5560): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-17 15:52:35 (5560): Setting Boot Options for VM.
2025-12-17 15:52:35 (5560): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-17 15:52:36 (5560): Enabling VM Network Access.
2025-12-17 15:52:36 (5560): Disabling USB Support for VM.
2025-12-17 15:52:36 (5560): Disabling COM Port Support for VM.
2025-12-17 15:52:36 (5560): Disabling LPT Port Support for VM.
2025-12-17 15:52:37 (5560): Disabling Audio Support for VM.
2025-12-17 15:52:37 (5560): Disabling Clipboard Support for VM.
2025-12-17 15:52:37 (5560): Disabling Drag and Drop Support for VM.
2025-12-17 15:52:37 (5560): Adding storage controller(s) to VM.
2025-12-17 15:52:38 (5560): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-17 15:52:40 (5560): Adding VirtualBox Guest Additions to VM.
2025-12-17 15:52:40 (5560): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-17 15:52:40 (5560): forwarding host port 52511 to guest port 80
2025-12-17 15:52:41 (5560): Enabling remote desktop for VM.
2025-12-17 15:52:41 (5560): Enabling shared directory for VM.
2025-12-17 15:52:42 (5560): Starting VM using VBoxManage interface. (boinc_98552cae49420a4e, slot#0)
2025-12-17 15:52:47 (5560): Successfully started VM. (PID = '19380')
2025-12-17 15:52:47 (5560): Reporting VM Process ID to BOINC.
2025-12-17 15:52:47 (5560): Guest Log: BIOS: VirtualBox 7.2.2
2025-12-17 15:52:47 (5560): Guest Log: CPUID EDX: 0x178bfbff
2025-12-17 15:52:47 (5560): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-17 15:52:47 (5560): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-17 15:52:47 (5560): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-17 15:52:47 (5560): Detected: Web Application Enabled (http://localhost:52511)
2025-12-17 15:52:47 (5560): Detected: Remote Desktop Enabled (localhost:52512)
2025-12-17 15:52:47 (5560): Preference change detected
2025-12-17 15:52:47 (5560): Setting CPU throttle for VM. (50%)
2025-12-17 15:52:47 (5560): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-17 15:52:49 (5560): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-17 15:52:49 (5560): Guest Log: BIOS: Booting from Hard Disk...
2025-12-17 15:52:53 (5560): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-17 15:52:53 (5560): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-17 15:52:53 (5560): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-17 15:53:01 (5560): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-17 15:53:01 (5560): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-17 15:53:18 (5560): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000103 main     Log opened 2025-12-17T15:53:16.305615000Z
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000202 main     OS Product: Linux
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000224 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000241 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000258 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000258 main     Process ID: 1340
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000259 main     Package type: LINUX_64BITS_GENERIC
2025-12-17 15:53:18 (5560): Guest Log: 00:00:00.000750 main     5.2.32 r132073 started. Verbose level = 0
2025-12-17 15:53:18 (5560): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-17 15:53:18 (5560): Guest Log: [INFO] Mounting shared directory
2025-12-17 15:53:18 (5560): Guest Log: [INFO] Checking for init_data.xml
2025-12-17 15:53:23 (5560): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-17 15:53:23 (5560): Guest Log: [INFO] Detected branch: prod
2025-12-17 15:53:23 (5560): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-17 15:53:23 (5560): Guest Log: Copying input files
2025-12-17 15:53:24 (5560): Guest Log: Copied input files into RunAtlas.
2025-12-17 15:53:24 (5560): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-17 15:53:24 (5560): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-17 15:53:24 (5560): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-17 15:53:24 (5560): Guest Log: Further information can be found at the LHC@home message board.
2025-12-17 15:53:37 (5560): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-17 15:53:38 (5560): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-17 15:53:38 (5560): Guest Log: 2.6.3.0 1617 0 32200 154112 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-17 15:53:41 (5560): Guest Log: copied the webapp to /var/www
2025-12-17 15:53:41 (5560): Guest Log: ATHENA_PROC_NUMBER=6
2025-12-17 15:53:41 (5560): Guest Log: ATHENA_CORE_NUMBER=6
2025-12-17 15:53:41 (5560): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-17 15:53:41 (5560): Guest Log:  *** Starting ATLAS job. (PandaID=6930760395 taskID=47898763) ***
2025-12-17 17:32:49 (5560): Status Report: Elapsed Time: '6000.000000'
2025-12-17 17:32:49 (5560): Status Report: CPU Time: '20201.875000'
2025-12-17 18:11:37 (5560): Guest Log:  *** Job finished ***
2025-12-17 18:11:37 (5560): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:02,800 | INFO     | [job] control thread has finished
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:04,334 | INFO     | [data] queue_monitor thread has finished
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:28,604 | INFO     | [monitor] cgroup control has ended
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:30,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637434500928)>', '<ExcThread(monitor, started 140636489512704)>']
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:31,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:31,677 | INFO     | [monitor] control thread has ended
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,805 | INFO     | all workflow threads have been joined
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,805 | INFO     | end of generic workflow (traces error code: 0)
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,805 | INFO     | traces error code: 0
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,910 [wrapper] ==== pilot stdout END ====
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,913 [wrapper] ==== wrapper stdout RESUME ====
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,916 [wrapper] pilotpid: 6036
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:35,919 [wrapper] Pilot exit status: 0
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:36,268 [wrapper] pandaids: 6930760395
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:36,290 [wrapper] cleanup supervisor_pilot  5365 6037
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:36,293 [wrapper] Test setup, not cleaning
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:36,296 [wrapper] apfmon messages muted
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:36,299 [wrapper] ==== wrapper stdout END ====
2025-12-17 18:11:37 (5560): Guest Log: 2025-12-17 18:11:36,302 [wrapper] ==== wrapper stderr END ====
2025-12-17 18:11:37 (5560): Guest Log:  *** Error codes and diagnostics ***
2025-12-17 18:11:37 (5560): Guest Log:     "exeErrorCode": 0,
2025-12-17 18:11:37 (5560): Guest Log:     "exeErrorDiag": "",
2025-12-17 18:11:37 (5560): Guest Log:     "pilotErrorCode": 0,
2025-12-17 18:11:37 (5560): Guest Log:     "pilotErrorDiag": "",
2025-12-17 18:11:37 (5560): Guest Log:  *** Listing of results directory ***
2025-12-17 18:11:37 (5560): Guest Log: total 218904
2025-12-17 18:11:37 (5560): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 16 06:04 pilot3.tar.gz
2025-12-17 18:11:37 (5560): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 16 06:05 queuedata.json
2025-12-17 18:11:37 (5560): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 16 06:05 runpilot2-wrapper.sh
2025-12-17 18:11:37 (5560): Guest Log: -rwxr-xr-x. 1 atlas atlas    592397 Dec 17 15:53 input.tar.gz
2025-12-17 18:11:37 (5560): Guest Log: -rwxr-xr-x. 1 atlas atlas      8727 Dec 17 15:53 init_data.xml
2025-12-17 18:11:37 (5560): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 17 15:53 start_atlas.sh
2025-12-17 18:11:37 (5560): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 17 15:53 EVNT.47898761._000749.pool.root.1 -> /data/./ATLAS.root_0
2025-12-17 18:11:37 (5560): Guest Log: -rw-r--r--. 1 atlas atlas      2508 Dec 17 15:53 pandaJob.out
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas    987423 Dec 17 15:54 agis_schedconf.cvmfs.json
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 17 15:54 agis_ddmendpoints.agis.ALL.json
2025-12-17 18:11:37 (5560): Guest Log: drwx------. 5 atlas atlas      4096 Dec 17 15:54 pilot3
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas 217587862 Dec 17 18:10 HITS.47898763._019232.pool.root.1
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas      1026 Dec 17 18:10 memory_monitor_summary.json
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas        95 Dec 17 18:10 pilot_heartbeat.json
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas    346078 Dec 17 18:10 log.47898763._019232.job.log.tgz.1
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas      7793 Dec 17 18:10 heartbeat.json
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas      4612 Dec 17 18:11 pilotlog.txt
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas   1013990 Dec 17 18:11 log.47898763._019232.job.log.1
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas       357 Dec 17 18:11 output.list
2025-12-17 18:11:37 (5560): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 17 18:11 runtime_log
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas   1382400 Dec 17 18:11 result.tar.gz
2025-12-17 18:11:37 (5560): Guest Log: -rw-r--r--. 1 atlas atlas      8767 Dec 17 18:11 runtime_log.err
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas       661 Dec 17 18:11 1LhKDmwMdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsXZKDmRYRQVm.diag
2025-12-17 18:11:37 (5560): Guest Log: Looking for outputfile HITS.47898763._019232.pool.root.1
2025-12-17 18:11:37 (5560): Guest Log: HITS file was successfully produced
2025-12-17 18:11:37 (5560): Guest Log: -rw-------. 1 atlas atlas 217587862 Dec 17 18:10 /home/atlas/RunAtlas/HITS.47898763._019232.pool.root.1
2025-12-17 18:11:38 (5560): Guest Log: Successfully finished the ATLAS job!
2025-12-17 18:11:38 (5560): Guest Log: Copying the results back to the shared directory!
2025-12-17 18:11:38 (5560): Guest Log:  *** Contents of shared directory: ***
2025-12-17 18:11:38 (5560): Guest Log: total 432564
2025-12-17 18:11:38 (5560): Guest Log: -rwxrwxrwx. 1 root root 223344242 Dec 17 15:52 ATLAS.root_0
2025-12-17 18:11:38 (5560): Guest Log: -rwxrwxrwx. 1 root root 217587862 Dec 17  2025 HITS.pool.root.1
2025-12-17 18:11:38 (5560): Guest Log: -rwxrwxrwx. 1 root root      8727 Dec 17 15:52 init_data.xml
2025-12-17 18:11:38 (5560): Guest Log: -rwxrwxrwx. 1 root root    592397 Dec 16 18:25 input.tar.gz
2025-12-17 18:11:38 (5560): Guest Log: -rwxrwxrwx. 1 root root   1382400 Dec 17  2025 result.tar.gz
2025-12-17 18:11:38 (5560): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 16 18:25 start_atlas.sh
2025-12-17 18:11:38 (5560): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-17 18:11:38 (5560): VM Completion File Detected.
2025-12-17 18:11:38 (5560): Powering off VM.
2025-12-17 18:11:39 (5560): Successfully stopped VM.
2025-12-17 18:11:39 (5560): Deregistering VM. (boinc_98552cae49420a4e, slot#0)
2025-12-17 18:11:39 (5560): Removing network bandwidth throttle group from VM.
2025-12-17 18:11:39 (5560): Removing VM from VirtualBox.
2025-12-17 18:11:44 (5560): called boinc_finish(0)

</stderr_txt>
]]>

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