Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:38:14 (23711): wrapper (7.7.26015): starting
12:38:14 (23711): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 12:38:14] Arguments: --nthreads 8
[2025-12-16 12:38:14] Threads: 8
[2025-12-16 12:38:14] Checking for CVMFS
[2025-12-16 12:38:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 12:38:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 12:38:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 12:38:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 12:38:15] 2.11.2.0 3733 146810 148412 154081 2 188 13428028 18432001 1789 130560 0 109010760 99.978 5978549 32305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 12:38:15] CVMFS is ok
[2025-12-16 12:38:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 12:38:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 12:38:15] Further information can be found at the LHC@home message board.
[2025-12-16 12:38:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 12:38:15] Checking for apptainer binary...
[2025-12-16 12:38:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 12:38:15] Running /usr/bin/apptainer --version
[2025-12-16 12:38:15] apptainer version 1.3.2-1.el7
[2025-12-16 12:38:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 12:38:16] c-206-23.aglt2.org
[2025-12-16 12:38:16] apptainer works
[2025-12-16 12:38:16] Set ATHENA_PROC_NUMBER=8
[2025-12-16 12:38:16] Set ATHENA_CORE_NUMBER=8
[2025-12-16 12:38:16] Starting ATLAS job with PandaID=6931013889
[2025-12-16 12:38:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 15:59:58]  *** The last 200 lines of the pilot log: ***
[2025-12-16 15:59:58] 2025-12-16 20:59:25,809 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2405.75
[2025-12-16 15:59:58] 2025-12-16 20:59:25,813 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931013889/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,814 | INFO     | extracted standard info from prmon json
[2025-12-16 15:59:58] 2025-12-16 20:59:25,814 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 15:59:58] 2025-12-16 20:59:25,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 15:59:58] 2025-12-16 20:59:25,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 15:59:58] 2025-12-16 20:59:25,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 15:59:58] 2025-12-16 20:59:25,821 | INFO     | fitting pss+swap vs Time
[2025-12-16 15:59:58] 2025-12-16 20:59:25,822 | INFO     | sum of square deviations: 2406926989.5
[2025-12-16 15:59:58] 2025-12-16 20:59:25,823 | INFO     | sum of deviations: -481093885.0000076
[2025-12-16 15:59:58] 2025-12-16 20:59:25,824 | INFO     | mean x: 1765912735.5
[2025-12-16 15:59:58] 2025-12-16 20:59:25,824 | INFO     | mean y: 2460258.1818181816
[2025-12-16 15:59:58] 2025-12-16 20:59:25,824 | INFO     | intersect: 355428928.27395517
[2025-12-16 15:59:58] 2025-12-16 20:59:25,824 | INFO     | chi2: 2.053856247975591
[2025-12-16 15:59:58] 2025-12-16 20:59:25,825 | INFO     | sum of square deviations: 2229146912.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,827 | INFO     | sum of deviations: 12412040758.000006
[2025-12-16 15:59:58] 2025-12-16 20:59:25,827 | INFO     | mean x: 1765912583.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,827 | INFO     | mean y: 2471090.834196891
[2025-12-16 15:59:58] 2025-12-16 20:59:25,827 | INFO     | intersect: -9830249595.84124
[2025-12-16 15:59:58] 2025-12-16 20:59:25,828 | INFO     | chi2: 1.2815086089074004
[2025-12-16 15:59:58] 2025-12-16 20:59:25,828 | INFO     | current chi2=1.2815086089074004 (change=37.604756410263114 %)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,828 | INFO     | sum of square deviations: 2060343747.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,830 | INFO     | sum of deviations: 12137178174.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,830 | INFO     | mean x: 1765912430.5
[2025-12-16 15:59:58] 2025-12-16 20:59:25,830 | INFO     | mean y: 2470842.4680851065
[2025-12-16 15:59:58] 2025-12-16 20:59:25,830 | INFO     | intersect: -10400256294.626429
[2025-12-16 15:59:58] 2025-12-16 20:59:25,831 | INFO     | chi2: 1.2822731479542209
[2025-12-16 15:59:58] 2025-12-16 20:59:25,831 | INFO     | current chi2=1.2822731479542209 (change=-0.05965929854129796 %)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,831 | INFO     | right removable region: 187
[2025-12-16 15:59:58] 2025-12-16 20:59:25,832 | INFO     | sum of square deviations: 2229146912.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,833 | INFO     | sum of deviations: -26200118784.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,834 | INFO     | mean x: 1765912888.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,834 | INFO     | mean y: 2482055.1191709843
[2025-12-16 15:59:58] 2025-12-16 20:59:25,834 | INFO     | intersect: 20758012872.190994
[2025-12-16 15:59:58] 2025-12-16 20:59:25,834 | INFO     | chi2: 0.8436804967827775
[2025-12-16 15:59:58] 2025-12-16 20:59:25,835 | INFO     | current chi2=0.8436804967827775 (change=58.922125264883476 %)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,835 | INFO     | sum of square deviations: 2060343747.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,837 | INFO     | sum of deviations: -26823106873.5
[2025-12-16 15:59:58] 2025-12-16 20:59:25,837 | INFO     | mean x: 1765913040.5
[2025-12-16 15:59:58] 2025-12-16 20:59:25,837 | INFO     | mean y: 2482579.090425532
[2025-12-16 15:59:58] 2025-12-16 20:59:25,837 | INFO     | intersect: 22992468732.42469
[2025-12-16 15:59:58] 2025-12-16 20:59:25,838 | INFO     | chi2: 0.8304008929015814
[2025-12-16 15:59:58] 2025-12-16 20:59:25,838 | INFO     | current chi2=0.8304008929015814 (change=1.5740086361881602 %)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,838 | INFO     | left removable region: 20
[2025-12-16 15:59:58] 2025-12-16 20:59:25,838 | INFO     | sum of square deviations: 1444149868.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,840 | INFO     | sum of deviations: -8986223844.999998
[2025-12-16 15:59:58] 2025-12-16 20:59:25,840 | INFO     | mean x: 1765913010.0
[2025-12-16 15:59:58] 2025-12-16 20:59:25,840 | INFO     | mean y: 2490122.4431137727
[2025-12-16 15:59:58] 2025-12-16 20:59:25,840 | INFO     | intersect: 10990885406.261206
[2025-12-16 15:59:58] 2025-12-16 20:59:25,841 | INFO     | chi2: 0.03410360132216345
[2025-12-16 15:59:58] 2025-12-16 20:59:25,841 | INFO     | current memory leak: -6.22 B/s (using 167 data points, chi2=0.03)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,841 | INFO     | could have reported an average CPU frequency of 2472 MHz (10 samples)
[2025-12-16 15:59:58] 2025-12-16 20:59:25,842 | INFO     | ..............................
[2025-12-16 15:59:58] 2025-12-16 20:59:25,842 | INFO     | . Timing measurements:
[2025-12-16 15:59:58] 2025-12-16 20:59:25,842 | INFO     | . get job = 0 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,842 | INFO     | . initial setup = 2 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,842 | INFO     | . payload setup = 4 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,842 | INFO     | . stage-in = 0 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,843 | INFO     | . payload execution = 12031 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,843 | INFO     | . stage-out = 2 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,843 | INFO     | . log creation = 0 s
[2025-12-16 15:59:58] 2025-12-16 20:59:25,843 | INFO     | ..............................
[2025-12-16 15:59:58] 2025-12-16 20:59:26,004 | INFO     | 
[2025-12-16 15:59:58] 2025-12-16 20:59:26,005 | INFO     | job summary report
[2025-12-16 15:59:58] 2025-12-16 20:59:26,005 | INFO     | --------------------------------------------------
[2025-12-16 15:59:58] 2025-12-16 20:59:26,005 | INFO     | PanDA job id: 6931013889
[2025-12-16 15:59:58] 2025-12-16 20:59:26,005 | INFO     | task id: 47886831
[2025-12-16 15:59:58] 2025-12-16 20:59:26,005 | INFO     | errors: (none)
[2025-12-16 15:59:58] 2025-12-16 20:59:26,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 15:59:58] 2025-12-16 20:59:26,006 | INFO     | pilot state: finished 
[2025-12-16 15:59:58] 2025-12-16 20:59:26,006 | INFO     | transexitcode: 0
[2025-12-16 15:59:58] 2025-12-16 20:59:26,006 | INFO     | exeerrorcode: 0
[2025-12-16 15:59:58] 2025-12-16 20:59:26,006 | INFO     | exeerrordiag: 
[2025-12-16 15:59:58] 2025-12-16 20:59:26,006 | INFO     | exitcode: 0
[2025-12-16 15:59:58] 2025-12-16 20:59:26,006 | INFO     | exitmsg: OK
[2025-12-16 15:59:58] 2025-12-16 20:59:26,007 | INFO     | cpuconsumptiontime: 91909 s
[2025-12-16 15:59:58] 2025-12-16 20:59:26,007 | INFO     | nevents: 400
[2025-12-16 15:59:58] 2025-12-16 20:59:26,007 | INFO     | neventsw: 0
[2025-12-16 15:59:58] 2025-12-16 20:59:26,007 | INFO     | pid: 1355
[2025-12-16 15:59:58] 2025-12-16 20:59:26,007 | INFO     | pgrp: 1355
[2025-12-16 15:59:58] 2025-12-16 20:59:26,008 | INFO     | corecount: 8
[2025-12-16 15:59:58] 2025-12-16 20:59:26,008 | INFO     | event service: False
[2025-12-16 15:59:58] 2025-12-16 20:59:26,008 | INFO     | sizes: {0: 2283993, 3: 2284255, 11: 2284283, 12039: 2313821, 12040: 2313820, 12042: 2323058, 12047: 2323196}
[2025-12-16 15:59:58] 2025-12-16 20:59:26,008 | INFO     | --------------------------------------------------
[2025-12-16 15:59:58] 2025-12-16 20:59:26,008 | INFO     | 
[2025-12-16 15:59:58] 2025-12-16 20:59:26,008 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 15:59:58] 2025-12-16 20:59:26,033 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,034 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 15:59:58] 2025-12-16 20:59:26,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 15:59:58] 2025-12-16 20:59:26,037 | INFO     | job 6931013889 has completed (purged errors)
[2025-12-16 15:59:58] 2025-12-16 20:59:26,037 | INFO     | overall cleanup function is called
[2025-12-16 15:59:58] 2025-12-16 20:59:26,379 | INFO     | PID=27387 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 15:59:58] 2025-12-16 20:59:26,379 | INFO     | .. there are 3 such processes running
[2025-12-16 15:59:58] 2025-12-16 20:59:27,044 | INFO     | --- collectZombieJob: --- 10, [1355]
[2025-12-16 15:59:58] 2025-12-16 20:59:27,045 | INFO     | zombie collector waiting for pid 1355
[2025-12-16 15:59:58] 2025-12-16 20:59:27,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 15:59:58] 2025-12-16 20:59:27,045 | INFO     | collected zombie processes
[2025-12-16 15:59:58] 2025-12-16 20:59:27,045 | INFO     | will attempt to kill all subprocesses of pid=1355
[2025-12-16 15:59:58] 2025-12-16 20:59:27,206 | INFO     | process IDs to be killed: [1355] (in reverse order)
[2025-12-16 15:59:58] 2025-12-16 20:59:27,262 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 15:59:58] 2025-12-16 20:59:27,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 15:59:58] 2025-12-16 20:59:27,268 | INFO     | did not find any defunct processes belonging to 1355
[2025-12-16 15:59:58] 2025-12-16 20:59:27,273 | INFO     | did not find any defunct processes belonging to 1355
[2025-12-16 15:59:58] 2025-12-16 20:59:27,273 | INFO     | ready for new job
[2025-12-16 15:59:58] 2025-12-16 20:59:27,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 15:59:58] 2025-12-16 20:59:27,275 | INFO     | ***************************************
[2025-12-16 15:59:58] 2025-12-16 20:59:27,276 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 15:59:58] 2025-12-16 20:59:27,276 | INFO     | ***************************************
[2025-12-16 15:59:58] 2025-12-16 20:59:27,276 | INFO     | 
[2025-12-16 15:59:58] 2025-12-16 20:59:27,277 | INFO     | architecture information:
[2025-12-16 15:59:58] 2025-12-16 20:59:27,279 | INFO     | executing command: cat /etc/os-release
[2025-12-16 15:59:58] 2025-12-16 20:59:27,294 | INFO     | cat /etc/os-release:
[2025-12-16 15:59:58] NAME="CentOS Linux"
[2025-12-16 15:59:58] VERSION="7 (Core)"
[2025-12-16 15:59:58] ID="centos"
[2025-12-16 15:59:58] ID_LIKE="rhel fedora"
[2025-12-16 15:59:58] VERSION_ID="7"
[2025-12-16 15:59:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 15:59:58] ANSI_COLOR="0;31"
[2025-12-16 15:59:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 15:59:58] HOME_URL="https://www.centos.org/"
[2025-12-16 15:59:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 15:59:58] 
[2025-12-16 15:59:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 15:59:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 15:59:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 15:59:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 15:59:58] 
[2025-12-16 15:59:58] 2025-12-16 20:59:27,294 | INFO     | ***************************************
[2025-12-16 15:59:58] 2025-12-16 20:59:27,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 15:59:58] 2025-12-16 20:59:27,807 | INFO     | sufficient remaining disk space (28122808320 B)
[2025-12-16 15:59:58] 2025-12-16 20:59:27,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 15:59:58] 2025-12-16 20:59:27,808 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 15:59:58] 2025-12-16 20:59:27,808 | INFO     | update_server=False
[2025-12-16 15:59:58] 2025-12-16 20:59:27,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 15:59:58] 2025-12-16 20:59:27,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 15:59:58] 2025-12-16 20:59:27,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 15:59:58] 2025-12-16 20:59:27,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 15:59:58] 2025-12-16 20:59:27,809 | INFO     | aborting loop
[2025-12-16 15:59:58] 2025-12-16 20:59:28,329 | INFO     | all data control threads have been joined
[2025-12-16 15:59:58] 2025-12-16 20:59:28,374 | INFO     | all payload control threads have been joined
[2025-12-16 15:59:58] 2025-12-16 20:59:28,814 | INFO     | [job] queue monitor thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:28,814 | INFO     | [job] job monitor thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:28,815 | INFO     | [job] retrieve thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:28,828 | INFO     | [job] validate thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 15:59:58] 2025-12-16 20:59:29,183 | INFO     | [payload] validate_post thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,334 | INFO     | [data] control thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,336 | INFO     | all job control threads have been joined
[2025-12-16 15:59:58] 2025-12-16 20:59:29,357 | INFO     | [data] copytool_in thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,358 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,377 | INFO     | [payload] failed_post thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,379 | INFO     | [payload] control thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:29,930 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:30,305 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:30,341 | INFO     | [job] control thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:31,032 | INFO     | [data] copytool_out thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:31,815 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:38,639 | INFO     | job.realtimelogging is not enabled
[2025-12-16 15:59:58] 2025-12-16 20:59:39,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 15:59:58] 2025-12-16 20:59:44,997 | INFO     | [monitor] cgroup control has ended
[2025-12-16 15:59:58] 2025-12-16 20:59:45,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289395210048)>', '<ExcThread(monitor, started 140289092069120)>']
[2025-12-16 15:59:58] 2025-12-16 20:59:50,664 | INFO     | all workflow threads have been joined
[2025-12-16 15:59:58] 2025-12-16 20:59:50,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 15:59:58] 2025-12-16 20:59:50,665 | INFO     | traces error code: 0
[2025-12-16 15:59:58] 2025-12-16 20:59:50,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 15:59:58] 2025-12-16 20:59:58,551 | INFO     | PID=27387 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 15:59:58] 2025-12-16 20:59:58,552 | INFO     | .. there are 3 such processes running
[2025-12-16 15:59:58] 2025-12-16 20:59:58,552 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 15:59:58] 2025-12-16 20:59:58,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 15:59:58] 2025-12-16 20:59:58,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 15:59:58] 2025-12-16 20:59:58,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 15:59:58] 2025-12-16 20:59:58,553 | INFO     | [monitor] control thread has ended
[2025-12-16 15:59:58] 2025-12-16 20:59:58,673 [wrapper] ==== pilot stdout END ====
[2025-12-16 15:59:58] 2025-12-16 20:59:58,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 15:59:58] 2025-12-16 20:59:58,677 [wrapper] pilotpid: 27387
[2025-12-16 15:59:58] 2025-12-16 20:59:58,679 [wrapper] Pilot exit status: 0
[2025-12-16 15:59:58] 2025-12-16 20:59:58,688 [wrapper] pandaids: 6931013889
[2025-12-16 15:59:58] 2025-12-16 20:59:58,727 [wrapper] cleanup supervisor_pilot 31137 27388
[2025-12-16 15:59:58] 2025-12-16 20:59:58,729 [wrapper] Test setup, not cleaning
[2025-12-16 15:59:58] 2025-12-16 20:59:58,732 [wrapper] apfmon messages muted
[2025-12-16 15:59:58] 2025-12-16 20:59:58,734 [wrapper] ==== wrapper stdout END ====
[2025-12-16 15:59:58] 2025-12-16 20:59:58,737 [wrapper] ==== wrapper stderr END ====
[2025-12-16 15:59:58]  *** Error codes and diagnostics ***
[2025-12-16 15:59:58]     "exeErrorCode": 0,
[2025-12-16 15:59:58]     "exeErrorDiag": "",
[2025-12-16 15:59:58]     "pilotErrorCode": 0,
[2025-12-16 15:59:58]     "pilotErrorDiag": "",
[2025-12-16 15:59:58]  *** Listing of results directory ***
[2025-12-16 15:59:58] total 343600
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 07:09 queuedata.json
[2025-12-16 15:59:58] -rwx------ 1 boincer umatlas     36322 Dec 16 07:09 runpilot2-wrapper.sh
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 07:11 pilot3.tar.gz
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas       100 Dec 16 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 15:59:58] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 12:38 run_atlas
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas       105 Dec 16 12:38 job.xml
[2025-12-16 15:59:58] -rw-r--r-- 2 boincer umatlas 194650332 Dec 16 12:38 EVNT.47886829._000555.pool.root.1
[2025-12-16 15:59:58] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 12:38 start_atlas.sh
[2025-12-16 15:59:58] drwxrwx--x 2 boincer umatlas      4096 Dec 16 12:38 shared
[2025-12-16 15:59:58] -rw-r--r-- 2 boincer umatlas    592420 Dec 16 12:38 input.tar.gz
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas         0 Dec 16 12:38 boinc_lockfile
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas      2539 Dec 16 12:38 pandaJob.out
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas        57 Dec 16 12:38 setup.sh.local
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas    987401 Dec 16 12:38 agis_schedconf.cvmfs.json
[2025-12-16 15:59:58] drwx------ 5 boincer umatlas      4096 Dec 16 12:38 pilot3
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas      5951 Dec 16 15:56 init_data.xml
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas 149058052 Dec 16 15:58 HITS.47886831._013536.pool.root.1
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas      1046 Dec 16 15:59 memory_monitor_summary.json
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas   1516240 Dec 16 15:59 agis_ddmendpoints.agis.ALL.json
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas    429275 Dec 16 15:59 log.47886831._013536.job.log.tgz.1
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas       530 Dec 16 15:59 boinc_task_state.xml
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas      7846 Dec 16 15:59 heartbeat.json
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas        28 Dec 16 15:59 wrapper_checkpoint.txt
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 15:59 boinc_mmap_file
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas        95 Dec 16 15:59 pilot_heartbeat.json
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas       820 Dec 16 15:59 pilotlog.txt
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas   1681178 Dec 16 15:59 log.47886831._013536.job.log.1
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas       357 Dec 16 15:59 output.list
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas       620 Dec 16 15:59 runtime_log
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas   2129920 Dec 16 15:59 result.tar.gz
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas       662 Dec 16 15:59 TTIODmV3ip8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzbVKDmfnMmqn.diag
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas      9343 Dec 16 15:59 runtime_log.err
[2025-12-16 15:59:58] -rw-r--r-- 1 boincer umatlas     21127 Dec 16 15:59 stderr.txt
[2025-12-16 15:59:58] HITS file was successfully produced:
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas 149058052 Dec 16 15:58 shared/HITS.pool.root.1
[2025-12-16 15:59:58]  *** Contents of shared directory: ***
[2025-12-16 15:59:58] total 338344
[2025-12-16 15:59:58] -rw-r--r-- 2 boincer umatlas 194650332 Dec 16 12:38 ATLAS.root_0
[2025-12-16 15:59:58] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 12:38 start_atlas.sh
[2025-12-16 15:59:58] -rw-r--r-- 2 boincer umatlas    592420 Dec 16 12:38 input.tar.gz
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas 149058052 Dec 16 15:58 HITS.pool.root.1
[2025-12-16 15:59:58] -rw------- 1 boincer umatlas   2129920 Dec 16 15:59 result.tar.gz
16:00:00 (23711): run_atlas exited; CPU time 92092.987839
16:00:00 (23711): called boinc_finish(0)

</stderr_txt>
]]>

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