Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:57:46 (322164): wrapper (7.7.26015): starting
21:57:46 (322164): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 21:57:46] Arguments: --nthreads 8
[2025-12-16 21:57:46] Threads: 8
[2025-12-16 21:57:46] Checking for CVMFS
[2025-12-16 21:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:57:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:57:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:57:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:57:46] 2.13.2.0 6987 921 58936 154087 0 57 2286058 4097024 0 130560 0 849867 99.993 35653 26138 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-16 21:57:46] CVMFS is ok
[2025-12-16 21:57:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:57:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:57:46] Further information can be found at the LHC@home message board.
[2025-12-16 21:57:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:57:46] Checking for apptainer binary...
[2025-12-16 21:57:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-16 21:57:46] apptainer is not installed, using version from CVMFS
[2025-12-16 21:57:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:57:46] pckeatlas02
[2025-12-16 21:57:46] apptainer works
[2025-12-16 21:57:46] Set ATHENA_PROC_NUMBER=8
[2025-12-16 21:57:46] Set ATHENA_CORE_NUMBER=8
[2025-12-16 21:57:46] Starting ATLAS job with PandaID=6931014429
[2025-12-16 21:57:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:24:03]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:24:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 23:24:03]  replicas=None
[2025-12-16 23:24:03]  scope=mc23_13p6TeV
[2025-12-16 23:24:03]  status=None
[2025-12-16 23:24:03]  status_code=0
[2025-12-16 23:24:03]  storage_token=
[2025-12-16 23:24:03]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6931014429/log.47886831._013976.job.log.tgz.1
[2025-12-16 23:24:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/a5/log.47886831._013976.job.log.tgz.1
[2025-12-16 23:24:03]  workdir=None
[2025-12-16 23:24:03] ]
[2025-12-16 23:24:03] 2025-12-16 22:22:58,988 | INFO     | transferring file log.47886831._013976.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6931014429/log.47886831._013976.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-16 23:24:03] 2025-12-16 22:22:58,988 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6931014429/log.47886831._013976.job.log.tgz.1 /var/lib/boinc/slots/19/log.47886831._013976.j
[2025-12-16 23:24:03] 2025-12-16 22:22:58,996 | INFO     | adding to output.list: log.47886831._013976.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/a5/log.47886831._013976.job.log.tg
[2025-12-16 23:24:03] 2025-12-16 22:22:58,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 23:24:03] 2025-12-16 22:22:58,996 | INFO     | summary of transferred files:
[2025-12-16 23:24:03] 2025-12-16 22:22:58,996 | INFO     |  -- lfn=log.47886831._013976.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 23:24:03] 2025-12-16 22:22:58,996 | INFO     | stage-out finished correctly
[2025-12-16 23:24:03] 2025-12-16 22:22:59,121 | INFO     | time since job start (5109s) is within the limit (174528.0s)
[2025-12-16 23:24:03] 2025-12-16 22:23:00,049 | INFO     | monitor loop #389: job 0:6931014429 is in state 'finished'
[2025-12-16 23:24:03] 2025-12-16 22:23:00,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:24:03] 2025-12-16 22:23:01,126 | INFO     | time since job start (5111s) is within the limit (174528.0s)
[2025-12-16 23:24:03] 2025-12-16 22:23:02,168 | INFO     | PID=325918 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 23:24:03] 2025-12-16 22:23:02,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 23:24:03] 2025-12-16 22:23:02,554 | INFO     | monitor loop #390: job 0:6931014429 is in state 'finished'
[2025-12-16 23:24:03] 2025-12-16 22:23:02,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:24:03] 2025-12-16 22:23:03,168 | INFO     | time since job start (5113s) is within the limit (174528.0s)
[2025-12-16 23:24:03] 2025-12-16 22:23:03,239 | INFO     | job 6931014429 has state=finished
[2025-12-16 23:24:03] 2025-12-16 22:23:03,239 | INFO     | preparing for final server update for job 6931014429 in state='finished'
[2025-12-16 23:24:03] 2025-12-16 22:23:03,239 | INFO     | this job has now completed (state=finished)
[2025-12-16 23:24:03] 2025-12-16 22:23:03,239 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 23:24:03] 2025-12-16 22:23:03,239 | INFO     | log transfer has been attempted: DONE
[2025-12-16 23:24:03] 2025-12-16 22:23:03,239 | INFO     | job 6931014429 has finished - writing final server update
[2025-12-16 23:24:03] 2025-12-16 22:23:03,240 | INFO     | total number of processed events: 400 (read)
[2025-12-16 23:24:03] 2025-12-16 22:23:03,240 | INFO     | executing command: lscpu
[2025-12-16 23:24:03] 2025-12-16 22:23:03,248 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 23:24:03] 2025-12-16 22:23:05,057 | INFO     | monitor loop #391: job 0:6931014429 is in state 'finished'
[2025-12-16 23:24:03] 2025-12-16 22:23:05,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:24:03] 2025-12-16 22:23:05,173 | INFO     | time since job start (5115s) is within the limit (174528.0s)
[2025-12-16 23:24:03] 2025-12-16 22:23:05,955 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 23:24:03] 2025-12-16 22:23:05,956 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3862.981625
[2025-12-16 23:24:03] 2025-12-16 22:23:05,956 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6931014429/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 23:24:03] 2025-12-16 22:23:05,957 | INFO     | extracted standard info from prmon json
[2025-12-16 23:24:03] 2025-12-16 22:23:05,957 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 23:24:03] 2025-12-16 22:23:05,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 23:24:03] 2025-12-16 22:23:05,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 23:24:03] 2025-12-16 22:23:05,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | fitting pss+swap vs Time
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | sum of square deviations: 141539398.0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | sum of deviations: -8622377572.0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | mean x: 1765921311.0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | mean y: 2625464.1948051946
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | intersect: 107580024556.1652
[2025-12-16 23:24:03] 2025-12-16 22:23:05,958 | INFO     | chi2: 0.1344434730826819
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | current memory leak: -60.92 B/s (using 77 data points, chi2=0.13)
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | could have reported an average CPU frequency of 3766 MHz (6 samples)
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | ..............................
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . Timing measurements:
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . get job = 0 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . initial setup = 0 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . payload setup = 3 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . stage-in = 0 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . payload execution = 5088 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . stage-out = 0 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | . log creation = 0 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,959 | INFO     | ..............................
[2025-12-16 23:24:03] 2025-12-16 22:23:05,994 | INFO     | 
[2025-12-16 23:24:03] 2025-12-16 22:23:05,994 | INFO     | job summary report
[2025-12-16 23:24:03] 2025-12-16 22:23:05,994 | INFO     | --------------------------------------------------
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | PanDA job id: 6931014429
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | task id: 47886831
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | errors: (none)
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | pilot state: finished 
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | transexitcode: 0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | exeerrorcode: 0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | exeerrordiag: 
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | exitcode: 0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | exitmsg: OK
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | cpuconsumptiontime: 38016 s
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | nevents: 400
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | neventsw: 0
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | pid: 333230
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | pgrp: 333230
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | corecount: 8
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | event service: False
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | sizes: {0: 2283994, 2: 2284256, 11: 2284284, 5095: 2310701, 5096: 2319701, 5100: 2319757, 5103: 2320079}
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | --------------------------------------------------
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | 
[2025-12-16 23:24:03] 2025-12-16 22:23:05,995 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,004 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:24:03] 2025-12-16 22:23:06,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:24:03] 2025-12-16 22:23:06,005 | INFO     | job 6931014429 has completed (purged errors)
[2025-12-16 23:24:03] 2025-12-16 22:23:06,005 | INFO     | overall cleanup function is called
[2025-12-16 23:24:03] 2025-12-16 22:23:07,011 | INFO     | --- collectZombieJob: --- 10, [333230]
[2025-12-16 23:24:03] 2025-12-16 22:23:07,011 | INFO     | zombie collector waiting for pid 333230
[2025-12-16 23:24:03] 2025-12-16 22:23:07,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:24:03] 2025-12-16 22:23:07,011 | INFO     | collected zombie processes
[2025-12-16 23:24:03] 2025-12-16 22:23:07,011 | INFO     | will attempt to kill all subprocesses of pid=333230
[2025-12-16 23:24:03] 2025-12-16 22:23:07,041 | INFO     | process IDs to be killed: [333230] (in reverse order)
[2025-12-16 23:24:03] 2025-12-16 22:23:07,057 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:24:03] 2025-12-16 22:23:07,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:24:03] 2025-12-16 22:23:07,058 | INFO     | did not find any defunct processes belonging to 333230
[2025-12-16 23:24:03] 2025-12-16 22:23:07,059 | INFO     | did not find any defunct processes belonging to 333230
[2025-12-16 23:24:03] 2025-12-16 22:23:07,059 | INFO     | ready for new job
[2025-12-16 23:24:03] 2025-12-16 22:23:07,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:24:03] 2025-12-16 22:23:07,060 | INFO     | ***************************************
[2025-12-16 23:24:03] 2025-12-16 22:23:07,060 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:24:03] 2025-12-16 22:23:07,060 | INFO     | ***************************************
[2025-12-16 23:24:03] 2025-12-16 22:23:07,060 | INFO     | 
[2025-12-16 23:24:03] 2025-12-16 22:23:07,060 | INFO     | architecture information:
[2025-12-16 23:24:03] 2025-12-16 22:23:07,060 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:24:03] 2025-12-16 22:23:07,065 | INFO     | cat /etc/os-release:
[2025-12-16 23:24:03] NAME="CentOS Linux"
[2025-12-16 23:24:03] VERSION="7 (Core)"
[2025-12-16 23:24:03] ID="centos"
[2025-12-16 23:24:03] ID_LIKE="rhel fedora"
[2025-12-16 23:24:03] VERSION_ID="7"
[2025-12-16 23:24:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:24:03] ANSI_COLOR="0;31"
[2025-12-16 23:24:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:24:03] HOME_URL="https://www.centos.org/"
[2025-12-16 23:24:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:24:03] 
[2025-12-16 23:24:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:24:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:24:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:24:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:24:03] 
[2025-12-16 23:24:03] 2025-12-16 22:23:07,066 | INFO     | ***************************************
[2025-12-16 23:24:03] 2025-12-16 22:23:07,568 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-12-16 23:24:03] 2025-12-16 22:23:07,575 | INFO     | sufficient remaining disk space (116133986304 B)
[2025-12-16 23:24:03] 2025-12-16 22:23:07,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:24:03] 2025-12-16 22:23:07,575 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:24:03] 2025-12-16 22:23:07,575 | INFO     | update_server=False
[2025-12-16 23:24:03] 2025-12-16 22:23:07,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:24:03] 2025-12-16 22:23:07,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:24:03] 2025-12-16 22:23:07,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:24:03] 2025-12-16 22:23:07,947 | INFO     | all payload control threads have been joined
[2025-12-16 23:24:03] 2025-12-16 22:23:08,034 | INFO     | all data control threads have been joined
[2025-12-16 23:24:03] 2025-12-16 22:23:08,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:24:03] 2025-12-16 22:23:08,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:24:03] 2025-12-16 22:23:08,566 | INFO     | aborting loop
[2025-12-16 23:24:03] 2025-12-16 22:23:08,581 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:08,581 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:08,664 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:08,953 | INFO     | [payload] control thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,039 | INFO     | [data] control thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,139 | INFO     | all job control threads have been joined
[2025-12-16 23:24:03] 2025-12-16 22:23:09,299 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,299 | INFO     | [job] validate thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,389 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,531 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,565 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,571 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,581 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:09,742 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:10,144 | INFO     | [job] control thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:12,566 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:17,927 | INFO     | job.realtimelogging is not enabled
[2025-12-16 23:24:03] 2025-12-16 22:23:18,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:24:03] 2025-12-16 22:23:38,302 | INFO     | PID=325918 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 23:24:03] 2025-12-16 22:23:38,303 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:24:03] 2025-12-16 22:23:38,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:24:03] 2025-12-16 22:23:38,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:24:03] 2025-12-16 22:23:58,378 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:24:03] 2025-12-16 22:23:58,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236214323008)>', '<ExcThread(monitor, started 140235807631104)>']
[2025-12-16 23:24:03] 2025-12-16 22:23:59,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:24:03] 2025-12-16 22:23:59,410 | INFO     | [monitor] control thread has ended
[2025-12-16 23:24:03] 2025-12-16 22:24:03,544 | INFO     | all workflow threads have been joined
[2025-12-16 23:24:03] 2025-12-16 22:24:03,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:24:03] 2025-12-16 22:24:03,544 | INFO     | traces error code: 0
[2025-12-16 23:24:03] 2025-12-16 22:24:03,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:24:03] 2025-12-16 22:24:03,601 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:24:03] 2025-12-16 22:24:03,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:24:03] 2025-12-16 22:24:03,603 [wrapper] pilotpid: 325918
[2025-12-16 23:24:03] 2025-12-16 22:24:03,604 [wrapper] Pilot exit status: 0
[2025-12-16 23:24:03] 2025-12-16 22:24:03,608 [wrapper] pandaids: 6931014429
[2025-12-16 23:24:03] 2025-12-16 22:24:03,618 [wrapper] cleanup supervisor_pilot  349172 325919
[2025-12-16 23:24:03] 2025-12-16 22:24:03,620 [wrapper] Test setup, not cleaning
[2025-12-16 23:24:03] 2025-12-16 22:24:03,621 [wrapper] apfmon messages muted
[2025-12-16 23:24:03] 2025-12-16 22:24:03,622 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:24:03] 2025-12-16 22:24:03,623 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:24:03]  *** Error codes and diagnostics ***
[2025-12-16 23:24:03]     "exeErrorCode": 0,
[2025-12-16 23:24:03]     "exeErrorDiag": "",
[2025-12-16 23:24:03]     "pilotErrorCode": 0,
[2025-12-16 23:24:03]     "pilotErrorDiag": "",
[2025-12-16 23:24:03]  *** Listing of results directory ***
[2025-12-16 23:24:03] total 336628
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc    579449 Dec 16 13:06 pilot3.tar.gz
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc      5112 Dec 16 13:07 queuedata.json
[2025-12-16 23:24:03] -rwx------. 1 boinc boinc     36322 Dec 16 13:08 runpilot2-wrapper.sh
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc       100 Dec 16 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:24:03] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 21:57 run_atlas
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc       105 Dec 16 21:57 job.xml
[2025-12-16 23:24:03] -rw-r--r--. 2 boinc boinc     15847 Dec 16 21:57 start_atlas.sh
[2025-12-16 23:24:03] drwxrwx--x. 2 boinc boinc        68 Dec 16 21:57 shared
[2025-12-16 23:24:03] -rw-r--r--. 2 boinc boinc    592412 Dec 16 21:57 input.tar.gz
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc      6275 Dec 16 21:57 init_data.xml
[2025-12-16 23:24:03] -rw-r--r--. 2 boinc boinc 191895556 Dec 16 21:57 EVNT.47886829._000494.pool.root.1
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc         0 Dec 16 21:57 boinc_lockfile
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc      2539 Dec 16 21:57 pandaJob.out
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc    987409 Dec 16 21:57 agis_schedconf.cvmfs.json
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc   1516240 Dec 16 21:57 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:24:03] drwx------. 5 boinc boinc      4096 Dec 16 21:57 pilot3
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc 146738072 Dec 16 23:22 HITS.47886831._013976.pool.root.1
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc      1014 Dec 16 23:22 memory_monitor_summary.json
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc    341413 Dec 16 23:22 log.47886831._013976.job.log.tgz.1
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc       529 Dec 16 23:23 boinc_task_state.xml
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc      7769 Dec 16 23:23 heartbeat.json
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc        95 Dec 16 23:23 pilot_heartbeat.json
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc      8192 Dec 16 23:24 boinc_mmap_file
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc        27 Dec 16 23:24 wrapper_checkpoint.txt
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc      4821 Dec 16 23:24 pilotlog.txt
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc    746542 Dec 16 23:24 log.47886831._013976.job.log.1
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc       357 Dec 16 23:24 output.list
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc       620 Dec 16 23:24 runtime_log
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc   1105920 Dec 16 23:24 result.tar.gz
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc      8846 Dec 16 23:24 runtime_log.err
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc       650 Dec 16 23:24 kOJODmh1ip8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4WVKDmQYIUIm.diag
[2025-12-16 23:24:03] -rw-r--r--. 1 boinc boinc     22098 Dec 16 23:24 stderr.txt
[2025-12-16 23:24:03] HITS file was successfully produced:
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc 146738072 Dec 16 23:22 shared/HITS.pool.root.1
[2025-12-16 23:24:03]  *** Contents of shared directory: ***
[2025-12-16 23:24:03] total 332376
[2025-12-16 23:24:03] -rw-r--r--. 2 boinc boinc     15847 Dec 16 21:57 start_atlas.sh
[2025-12-16 23:24:03] -rw-r--r--. 2 boinc boinc    592412 Dec 16 21:57 input.tar.gz
[2025-12-16 23:24:03] -rw-r--r--. 2 boinc boinc 191895556 Dec 16 21:57 ATLAS.root_0
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc 146738072 Dec 16 23:22 HITS.pool.root.1
[2025-12-16 23:24:03] -rw-------. 1 boinc boinc   1105920 Dec 16 23:24 result.tar.gz
23:24:05 (322164): run_atlas exited; CPU time 38056.824778
23:24:05 (322164): called boinc_finish(0)

</stderr_txt>
]]>

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