Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:21:25 (477906): wrapper (7.7.26015): starting
17:21:25 (477906): wrapper: running run_atlas (--nthreads 10)
[2025-12-16 17:21:25] Arguments: --nthreads 10
[2025-12-16 17:21:25] Threads: 10
[2025-12-16 17:21:25] Checking for CVMFS
[2025-12-16 17:21:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 17:21:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 17:21:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 17:21:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 17:21:26] 2.13.3.0 5308 37828 341516 154090 3 143 23613158 32935937 15884 16776704 0 104621363 99.340 203170779 40294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 17:21:26] CVMFS is ok
[2025-12-16 17:21:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 17:21:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 17:21:26] Further information can be found at the LHC@home message board.
[2025-12-16 17:21:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 17:21:26] Checking for apptainer binary...
[2025-12-16 17:21:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 17:21:26] Running /usr/bin/apptainer --version
[2025-12-16 17:21:26] apptainer version 1.4.5-2.el9
[2025-12-16 17:21:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 17:21:27] c6-1-24-1.aglt2.org
[2025-12-16 17:21:27] apptainer works
[2025-12-16 17:21:27] Set ATHENA_PROC_NUMBER=10
[2025-12-16 17:21:27] Set ATHENA_CORE_NUMBER=10
[2025-12-16 17:21:27] Starting ATLAS job with PandaID=6930761329
[2025-12-16 17:21:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 19:49:33]  *** The last 200 lines of the pilot log: ***
[2025-12-16 19:49:33] 2025-12-17 00:48:26,543 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930761329/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,544 | INFO     | extracted standard info from prmon json
[2025-12-16 19:49:33] 2025-12-17 00:48:26,544 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 19:49:33] 2025-12-17 00:48:26,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 19:49:33] 2025-12-17 00:48:26,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 19:49:33] 2025-12-17 00:48:26,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 19:49:33] 2025-12-17 00:48:26,547 | INFO     | fitting pss+swap vs Time
[2025-12-16 19:49:33] 2025-12-17 00:48:26,547 | INFO     | sum of square deviations: 888037713.077467
[2025-12-16 19:49:33] 2025-12-17 00:48:26,548 | INFO     | sum of deviations: -27755927028.00704
[2025-12-16 19:49:33] 2025-12-17 00:48:26,548 | INFO     | mean x: 1765928115.2042253
[2025-12-16 19:49:33] 2025-12-17 00:48:26,548 | INFO     | mean y: 2648146.3450704226
[2025-12-16 19:49:33] 2025-12-17 00:48:26,548 | INFO     | intersect: 55197344475.68747
[2025-12-16 19:49:33] 2025-12-17 00:48:26,549 | INFO     | chi2: 3.106438469677873
[2025-12-16 19:49:33] 2025-12-17 00:48:26,549 | INFO     | sum of square deviations: 797476882.218978
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | sum of deviations: -15786968862.35767
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | mean x: 1765927962.6715329
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | mean y: 2667819.0364963505
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | intersect: 34961235749.29413
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | chi2: 2.2516356166790006
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | current chi2=2.2516356166790006 (change=27.517134536629417 %)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,550 | INFO     | sum of square deviations: 713279792.810607
[2025-12-16 19:49:33] 2025-12-17 00:48:26,551 | INFO     | sum of deviations: -14305172754.712128
[2025-12-16 19:49:33] 2025-12-17 00:48:26,551 | INFO     | mean x: 1765927810.128788
[2025-12-16 19:49:33] 2025-12-17 00:48:26,551 | INFO     | mean y: 2670504.9242424243
[2025-12-16 19:49:33] 2025-12-17 00:48:26,551 | INFO     | intersect: 35419210621.25197
[2025-12-16 19:49:33] 2025-12-17 00:48:26,551 | INFO     | chi2: 2.25055207964012
[2025-12-16 19:49:33] 2025-12-17 00:48:26,552 | INFO     | current chi2=2.25055207964012 (change=0.04812221972570148 %)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,552 | INFO     | right removable region: 131
[2025-12-16 19:49:33] 2025-12-17 00:48:26,552 | INFO     | sum of square deviations: 797484583.0072998
[2025-12-16 19:49:33] 2025-12-17 00:48:26,552 | INFO     | sum of deviations: -55773629088.32118
[2025-12-16 19:49:33] 2025-12-17 00:48:26,553 | INFO     | mean x: 1765928267.729927
[2025-12-16 19:49:33] 2025-12-17 00:48:26,553 | INFO     | mean y: 2694734.883211679
[2025-12-16 19:49:33] 2025-12-17 00:48:26,553 | INFO     | intersect: 123506308848.07158
[2025-12-16 19:49:33] 2025-12-17 00:48:26,553 | INFO     | chi2: 1.1821421033137027
[2025-12-16 19:49:33] 2025-12-17 00:48:26,553 | INFO     | current chi2=1.1821421033137027 (change=61.94542029875496 %)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,553 | INFO     | sum of square deviations: 713311900.75
[2025-12-16 19:49:33] 2025-12-17 00:48:26,554 | INFO     | sum of deviations: -53762756429.500015
[2025-12-16 19:49:33] 2025-12-17 00:48:26,554 | INFO     | mean x: 1765928420.25
[2025-12-16 19:49:33] 2025-12-17 00:48:26,554 | INFO     | mean y: 2690966.712121212
[2025-12-16 19:49:33] 2025-12-17 00:48:26,554 | INFO     | intersect: 133101801510.09175
[2025-12-16 19:49:33] 2025-12-17 00:48:26,555 | INFO     | chi2: 1.153124336796811
[2025-12-16 19:49:33] 2025-12-17 00:48:26,555 | INFO     | current chi2=1.153124336796811 (change=2.454676678510233 %)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,555 | INFO     | left removable region: 20
[2025-12-16 19:49:33] 2025-12-17 00:48:26,555 | INFO     | sum of square deviations: 424126975.9639641
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | sum of deviations: -29260876679.666687
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | mean x: 1765928389.6846848
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | mean y: 2695774.6666666665
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | intersect: 121835580179.72816
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | chi2: 0.21699979111498535
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | current memory leak: -68.99 B/s (using 111 data points, chi2=0.22)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,556 | INFO     | could have reported an average CPU frequency of 3072 MHz (8 samples)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | ..............................
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . Timing measurements:
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . get job = 0 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . initial setup = 5 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . payload setup = 24 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . stage-in = 0 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . payload execution = 8665 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . stage-out = 1 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | . log creation = 0 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,557 | INFO     | ..............................
[2025-12-16 19:49:33] 2025-12-17 00:48:26,691 | INFO     | 
[2025-12-16 19:49:33] 2025-12-17 00:48:26,691 | INFO     | job summary report
[2025-12-16 19:49:33] 2025-12-17 00:48:26,691 | INFO     | --------------------------------------------------
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | PanDA job id: 6930761329
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | task id: 47886831
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | errors: (none)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | pilot state: finished 
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | transexitcode: 0
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | exeerrorcode: 0
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | exeerrordiag: 
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | exitcode: 0
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | exitmsg: OK
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | cpuconsumptiontime: 40380 s
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | nevents: 400
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | neventsw: 0
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | pid: 489389
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | pgrp: 489389
[2025-12-16 19:49:33] 2025-12-17 00:48:26,692 | INFO     | corecount: 10
[2025-12-16 19:49:33] 2025-12-17 00:48:26,693 | INFO     | event service: False
[2025-12-16 19:49:33] 2025-12-17 00:48:26,693 | INFO     | sizes: {0: 2283760, 1: 2283816, 2: 2284043, 3: 2284043, 14: 2284071, 21: 2284361, 24: 2284517, 8693: 2312655, 8694: 2312654, 8697: 2321708, 8700: 2321764, 8737: 23
[2025-12-16 19:49:33] 2025-12-17 00:48:26,693 | INFO     | --------------------------------------------------
[2025-12-16 19:49:33] 2025-12-17 00:48:26,693 | INFO     | 
[2025-12-16 19:49:33] 2025-12-17 00:48:26,693 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 19:49:33] 2025-12-17 00:48:26,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | job 6930761329 has completed (purged errors)
[2025-12-16 19:49:33] 2025-12-17 00:48:26,740 | INFO     | overall cleanup function is called
[2025-12-16 19:49:33] 2025-12-17 00:48:27,190 | INFO     | PID=482087 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 19:49:33] 2025-12-17 00:48:27,190 | INFO     | .. there are 17 such processes running
[2025-12-16 19:49:33] 2025-12-17 00:48:27,796 | INFO     | --- collectZombieJob: --- 10, [489389]
[2025-12-16 19:49:33] 2025-12-17 00:48:27,797 | INFO     | zombie collector waiting for pid 489389
[2025-12-16 19:49:33] 2025-12-17 00:48:27,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 19:49:33] 2025-12-17 00:48:27,797 | INFO     | collected zombie processes
[2025-12-16 19:49:33] 2025-12-17 00:48:27,797 | INFO     | will attempt to kill all subprocesses of pid=489389
[2025-12-16 19:49:33] 2025-12-17 00:48:29,213 | INFO     | process IDs to be killed: [489389] (in reverse order)
[2025-12-16 19:49:33] 2025-12-17 00:48:29,364 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 19:49:33] 2025-12-17 00:48:29,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 19:49:33] 2025-12-17 00:48:29,392 | INFO     | did not find any defunct processes belonging to 489389
[2025-12-16 19:49:33] 2025-12-17 00:48:29,411 | INFO     | did not find any defunct processes belonging to 489389
[2025-12-16 19:49:33] 2025-12-17 00:48:29,411 | INFO     | ready for new job
[2025-12-16 19:49:33] 2025-12-17 00:48:29,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 19:49:33] 2025-12-17 00:48:29,413 | INFO     | ***************************************
[2025-12-16 19:49:33] 2025-12-17 00:48:29,413 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 19:49:33] 2025-12-17 00:48:29,413 | INFO     | ***************************************
[2025-12-16 19:49:33] 2025-12-17 00:48:29,414 | INFO     | 
[2025-12-16 19:49:33] 2025-12-17 00:48:29,421 | INFO     | architecture information:
[2025-12-16 19:49:33] 2025-12-17 00:48:29,426 | INFO     | executing command: cat /etc/os-release
[2025-12-16 19:49:33] 2025-12-17 00:48:29,563 | INFO     | cat /etc/os-release:
[2025-12-16 19:49:33] NAME="CentOS Linux"
[2025-12-16 19:49:33] VERSION="7 (Core)"
[2025-12-16 19:49:33] ID="centos"
[2025-12-16 19:49:33] ID_LIKE="rhel fedora"
[2025-12-16 19:49:33] VERSION_ID="7"
[2025-12-16 19:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 19:49:33] ANSI_COLOR="0;31"
[2025-12-16 19:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 19:49:33] HOME_URL="https://www.centos.org/"
[2025-12-16 19:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 19:49:33] 
[2025-12-16 19:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 19:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 19:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 19:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 19:49:33] 
[2025-12-16 19:49:33] 2025-12-17 00:48:29,564 | INFO     | ***************************************
[2025-12-16 19:49:33] 2025-12-17 00:48:30,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 19:49:33] 2025-12-17 00:48:30,230 | INFO     | sufficient remaining disk space (75578212352 B)
[2025-12-16 19:49:33] 2025-12-17 00:48:30,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 19:49:33] 2025-12-17 00:48:30,231 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 19:49:33] 2025-12-17 00:48:30,231 | INFO     | update_server=False
[2025-12-16 19:49:33] 2025-12-17 00:48:30,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 19:49:33] 2025-12-17 00:48:30,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 19:49:33] 2025-12-17 00:48:30,237 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 19:49:33] 2025-12-17 00:48:30,238 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 19:49:33] 2025-12-17 00:48:30,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 19:49:33] 2025-12-17 00:48:30,238 | INFO     | will abort loop
[2025-12-16 19:49:33] 2025-12-17 00:48:30,520 | INFO     | all job control threads have been joined
[2025-12-16 19:49:33] 2025-12-17 00:48:31,228 | INFO     | all data control threads have been joined
[2025-12-16 19:49:33] 2025-12-17 00:48:31,246 | INFO     | [job] retrieve thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,253 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,255 | INFO     | all payload control threads have been joined
[2025-12-16 19:49:33] 2025-12-17 00:48:31,258 | INFO     | [job] job monitor thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,511 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,520 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,526 | INFO     | [job] control thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,527 | INFO     | [job] validate thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,612 | INFO     | [payload] validate_post thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:31,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 19:49:33] 2025-12-17 00:48:31,924 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 19:49:33] 2025-12-17 00:48:32,235 | INFO     | [data] control thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:32,247 | INFO     | [data] copytool_in thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:32,257 | INFO     | [data] copytool_out thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:32,261 | INFO     | [payload] control thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:32,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:32,454 | INFO     | [payload] failed_post thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:32,755 | INFO     | [job] queue monitor thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:48:35,936 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 19:49:33] 2025-12-17 00:49:00,666 | INFO     | PID=482087 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 19:49:33] 2025-12-17 00:49:00,666 | INFO     | .. there are 16 such processes running
[2025-12-16 19:49:33] 2025-12-17 00:49:00,695 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 19:49:33] 2025-12-17 00:49:00,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 19:49:33] 2025-12-17 00:49:00,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 19:49:33] 2025-12-17 00:49:24,618 | INFO     | [monitor] cgroup control has ended
[2025-12-16 19:49:33] 2025-12-17 00:49:25,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076941055808)>', '<ExcThread(monitor, started 140076449257216)>']
[2025-12-16 19:49:33] 2025-12-17 00:49:25,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 19:49:33] 2025-12-17 00:49:25,866 | INFO     | [monitor] control thread has ended
[2025-12-16 19:49:33] 2025-12-17 00:49:30,758 | INFO     | all workflow threads have been joined
[2025-12-16 19:49:33] 2025-12-17 00:49:30,758 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 19:49:33] 2025-12-17 00:49:30,758 | INFO     | traces error code: 0
[2025-12-16 19:49:33] 2025-12-17 00:49:30,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 19:49:33] 2025-12-17 00:49:31,904 [wrapper] ==== pilot stdout END ====
[2025-12-16 19:49:33] 2025-12-17 00:49:31,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 19:49:33] 2025-12-17 00:49:31,993 [wrapper] pilotpid: 482087
[2025-12-16 19:49:33] 2025-12-17 00:49:32,018 [wrapper] Pilot exit status: 0
[2025-12-16 19:49:33] 2025-12-17 00:49:32,146 [wrapper] pandaids: 6930761329
[2025-12-16 19:49:33] 2025-12-17 00:49:32,446 [wrapper] cleanup supervisor_pilot  869421 482088
[2025-12-16 19:49:33] 2025-12-17 00:49:32,511 [wrapper] Test setup, not cleaning
[2025-12-16 19:49:33] 2025-12-17 00:49:32,546 [wrapper] apfmon messages muted
[2025-12-16 19:49:33] 2025-12-17 00:49:32,578 [wrapper] ==== wrapper stdout END ====
[2025-12-16 19:49:33] 2025-12-17 00:49:32,608 [wrapper] ==== wrapper stderr END ====
[2025-12-16 19:49:33]  *** Error codes and diagnostics ***
[2025-12-16 19:49:33]     "exeErrorCode": 0,
[2025-12-16 19:49:33]     "exeErrorDiag": "",
[2025-12-16 19:49:33]     "pilotErrorCode": 0,
[2025-12-16 19:49:33]     "pilotErrorDiag": "",
[2025-12-16 19:49:33]  *** Listing of results directory ***
[2025-12-16 19:49:33] total 343004
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 01:04 pilot3.tar.gz
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 01:05 queuedata.json
[2025-12-16 19:49:33] -rwx------. 1 boincer umatlas     36322 Dec 16 01:05 runpilot2-wrapper.sh
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas       100 Dec 16 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 19:49:33] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 17:21 run_atlas
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas       105 Dec 16 17:21 job.xml
[2025-12-16 19:49:33] -rw-r--r--. 2 boincer umatlas 192073019 Dec 16 17:21 EVNT.47886829._000423.pool.root.1
[2025-12-16 19:49:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 17:21 start_atlas.sh
[2025-12-16 19:49:33] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 17:21 shared
[2025-12-16 19:49:33] -rw-r--r--. 2 boincer umatlas    592409 Dec 16 17:21 input.tar.gz
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas         0 Dec 16 17:21 boinc_lockfile
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas      2536 Dec 16 17:21 pandaJob.out
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas        57 Dec 16 17:21 setup.sh.local
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas    987393 Dec 16 17:22 agis_schedconf.cvmfs.json
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas   1516240 Dec 16 17:22 agis_ddmendpoints.agis.ALL.json
[2025-12-16 19:49:33] drwx------. 5 boincer umatlas      4096 Dec 16 17:22 pilot3
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas 152109109 Dec 16 19:46 HITS.47886831._012393.pool.root.1
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas       529 Dec 16 19:46 boinc_task_state.xml
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas      1042 Dec 16 19:47 memory_monitor_summary.json
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas    397179 Dec 16 19:47 log.47886831._012393.job.log.tgz.1
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas      6842 Dec 16 19:48 init_data.xml
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas      7826 Dec 16 19:48 heartbeat.json
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas        95 Dec 16 19:49 pilot_heartbeat.json
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas      5009 Dec 16 19:49 pilotlog.txt
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas   1168377 Dec 16 19:49 log.47886831._012393.job.log.1
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas       357 Dec 16 19:49 output.list
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 19:49 boinc_mmap_file
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas       620 Dec 16 19:49 runtime_log
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas   1587200 Dec 16 19:49 result.tar.gz
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas       653 Dec 16 19:49 VlcLDmmMdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBWZKDmrjJbKn.diag
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas      9349 Dec 16 19:49 runtime_log.err
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas        27 Dec 16 19:49 wrapper_checkpoint.txt
[2025-12-16 19:49:33] -rw-r--r--. 1 boincer umatlas     21282 Dec 16 19:49 stderr.txt
[2025-12-16 19:49:33] HITS file was successfully produced:
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas 152109109 Dec 16 19:46 shared/HITS.pool.root.1
[2025-12-16 19:49:33]  *** Contents of shared directory: ***
[2025-12-16 19:49:33] total 338276
[2025-12-16 19:49:33] -rw-r--r--. 2 boincer umatlas 192073019 Dec 16 17:21 ATLAS.root_0
[2025-12-16 19:49:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 17:21 start_atlas.sh
[2025-12-16 19:49:33] -rw-r--r--. 2 boincer umatlas    592409 Dec 16 17:21 input.tar.gz
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas 152109109 Dec 16 19:46 HITS.pool.root.1
[2025-12-16 19:49:33] -rw-------. 1 boincer umatlas   1587200 Dec 16 19:49 result.tar.gz
19:49:35 (477906): run_atlas exited; CPU time 40623.229018
19:49:35 (477906): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN