Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:42:30 (3872390): wrapper (7.7.26015): starting
19:42:30 (3872390): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 19:42:30] Arguments: --nthreads 4
[2025-12-16 19:42:30] Threads: 4
[2025-12-16 19:42:30] Checking for CVMFS
[2025-12-16 19:42:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 19:42:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 19:42:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 19:42:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 19:42:30] 2.13.3.0 7395 7808 63676 154093 0 57 4402232 102400000 1832 130560 0 9195649 99.877 1144107 1169 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-16 19:42:30] CVMFS is ok
[2025-12-16 19:42:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 19:42:30] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-16 19:42:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-16 19:42:30] Further information can be found at the LHC@home message board.
[2025-12-16 19:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 19:42:30] Checking for apptainer binary...
[2025-12-16 19:42:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 19:42:30] Running /usr/bin/apptainer --version
[2025-12-16 19:42:30] apptainer version 1.4.4
[2025-12-16 19:42:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 19:42:31] T7810-Ubuntu
[2025-12-16 19:42:31] apptainer works
[2025-12-16 19:42:31] Set ATHENA_PROC_NUMBER=4
[2025-12-16 19:42:31] Set ATHENA_CORE_NUMBER=4
[2025-12-16 19:42:31] Starting ATLAS job with PandaID=6930224498
[2025-12-16 19:42:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 22:58:20]  *** The last 200 lines of the pilot log: ***
[2025-12-16 22:58:20] 2025-12-17 03:57:46,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:58:20] 2025-12-17 03:57:47,074 | INFO     | time since job start (11703s) is within the limit (174528.0s)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,096 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 22:58:20] 2025-12-17 03:57:48,109 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2750.5840375000002
[2025-12-16 22:58:20] 2025-12-17 03:57:48,123 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/14/PanDA_Pilot-6930224498/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,124 | INFO     | extracted standard info from prmon json
[2025-12-16 22:58:20] 2025-12-17 03:57:48,124 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:58:20] 2025-12-17 03:57:48,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:58:20] 2025-12-17 03:57:48,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:58:20] 2025-12-17 03:57:48,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:58:20] 2025-12-17 03:57:48,129 | INFO     | fitting pss+swap vs Time
[2025-12-16 22:58:20] 2025-12-17 03:57:48,129 | INFO     | sum of square deviations: 2194675568.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,130 | INFO     | sum of deviations: -38667184195.50001
[2025-12-16 22:58:20] 2025-12-17 03:57:48,131 | INFO     | mean x: 1765938017.5
[2025-12-16 22:58:20] 2025-12-17 03:57:48,131 | INFO     | mean y: 2341060.0677083335
[2025-12-16 22:58:20] 2025-12-17 03:57:48,131 | INFO     | intersect: 31115755541.97924
[2025-12-16 22:58:20] 2025-12-17 03:57:48,131 | INFO     | chi2: 2.4070067530450645
[2025-12-16 22:58:20] 2025-12-17 03:57:48,132 | INFO     | sum of square deviations: 2027639878.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,133 | INFO     | sum of deviations: -26678033226.999996
[2025-12-16 22:58:20] 2025-12-17 03:57:48,133 | INFO     | mean x: 1765937865.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,133 | INFO     | mean y: 2351795.422459893
[2025-12-16 22:58:20] 2025-12-17 03:57:48,133 | INFO     | intersect: 23237123191.690804
[2025-12-16 22:58:20] 2025-12-17 03:57:48,133 | INFO     | chi2: 1.7456450889689439
[2025-12-16 22:58:20] 2025-12-17 03:57:48,134 | INFO     | current chi2=1.7456450889689439 (change=27.47651884397262 %)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,134 | INFO     | sum of square deviations: 1869302025.5
[2025-12-16 22:58:20] 2025-12-17 03:57:48,135 | INFO     | sum of deviations: -25823556725.5
[2025-12-16 22:58:20] 2025-12-17 03:57:48,135 | INFO     | mean x: 1765937712.5
[2025-12-16 22:58:20] 2025-12-17 03:57:48,135 | INFO     | mean y: 2352618.576923077
[2025-12-16 22:58:20] 2025-12-17 03:57:48,135 | INFO     | intersect: 24397978403.150524
[2025-12-16 22:58:20] 2025-12-17 03:57:48,136 | INFO     | chi2: 1.7406816776956553
[2025-12-16 22:58:20] 2025-12-17 03:57:48,136 | INFO     | current chi2=1.7406816776956553 (change=0.28433106504027117 %)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,136 | INFO     | right removable region: 181
[2025-12-16 22:58:20] 2025-12-17 03:57:48,136 | INFO     | sum of square deviations: 2027639878.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,137 | INFO     | sum of deviations: -59446293034.00001
[2025-12-16 22:58:20] 2025-12-17 03:57:48,137 | INFO     | mean x: 1765938170.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,138 | INFO     | mean y: 2359691.3903743317
[2025-12-16 22:58:20] 2025-12-17 03:57:48,138 | INFO     | intersect: 51776088879.086754
[2025-12-16 22:58:20] 2025-12-17 03:57:48,138 | INFO     | chi2: 1.0947385097148543
[2025-12-16 22:58:20] 2025-12-17 03:57:48,138 | INFO     | current chi2=1.0947385097148543 (change=54.51867726046391 %)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,139 | INFO     | sum of square deviations: 1869302025.5
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | sum of deviations: -50759338055.999985
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | mean x: 1765938322.5
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | mean y: 2351303.5384615385
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | intersect: 47954934179.40986
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | chi2: 1.0706890038244947
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | current chi2=1.0706890038244947 (change=2.1968265185650355 %)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,140 | INFO     | left removable region: 20
[2025-12-16 22:58:20] 2025-12-17 03:57:48,141 | INFO     | sum of square deviations: 1294014960.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,142 | INFO     | sum of deviations: -19687179223.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,142 | INFO     | mean x: 1765938292.0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,142 | INFO     | mean y: 2342835.217391304
[2025-12-16 22:58:20] 2025-12-17 03:57:48,142 | INFO     | intersect: 26869376622.340305
[2025-12-16 22:58:20] 2025-12-17 03:57:48,142 | INFO     | chi2: 0.2784736645208959
[2025-12-16 22:58:20] 2025-12-17 03:57:48,143 | INFO     | current memory leak: -15.21 B/s (using 161 data points, chi2=0.28)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,143 | INFO     | could have reported an average CPU frequency of 2737 MHz (10 samples)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,143 | INFO     | ..............................
[2025-12-16 22:58:20] 2025-12-17 03:57:48,143 | INFO     | . Timing measurements:
[2025-12-16 22:58:20] 2025-12-17 03:57:48,143 | INFO     | . get job = 0 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | . initial setup = 3 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | . payload setup = 6 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | . stage-in = 0 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | . payload execution = 11662 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | . stage-out = 3 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | . log creation = 0 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,144 | INFO     | ..............................
[2025-12-16 22:58:20] 2025-12-17 03:57:48,240 | INFO     | 
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | job summary report
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | --------------------------------------------------
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | PanDA job id: 6930224498
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | task id: 47886831
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | errors: (none)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | pilot state: finished 
[2025-12-16 22:58:20] 2025-12-17 03:57:48,241 | INFO     | transexitcode: 0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | exeerrorcode: 0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | exeerrordiag: 
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | exitcode: 0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | exitmsg: OK
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | cpuconsumptiontime: 45444 s
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | nevents: 400
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | neventsw: 0
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | pid: 3883377
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | pgrp: 3883377
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | corecount: 4
[2025-12-16 22:58:20] 2025-12-17 03:57:48,242 | INFO     | event service: False
[2025-12-16 22:58:20] 2025-12-17 03:57:48,243 | INFO     | sizes: {0: 2284005, 5: 2284267, 11: 2284323, 11672: 2313595, 11673: 2313594, 11676: 2322678, 11679: 2322862, 11688: 2323056}
[2025-12-16 22:58:20] 2025-12-17 03:57:48,243 | INFO     | --------------------------------------------------
[2025-12-16 22:58:20] 2025-12-17 03:57:48,243 | INFO     | 
[2025-12-16 22:58:20] 2025-12-17 03:57:48,243 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/14
[2025-12-16 22:58:20] 2025-12-17 03:57:48,265 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 22:58:20] 2025-12-17 03:57:48,268 | INFO     | job 6930224498 has completed (purged errors)
[2025-12-16 22:58:20] 2025-12-17 03:57:48,268 | INFO     | overall cleanup function is called
[2025-12-16 22:58:20] 2025-12-17 03:57:49,276 | INFO     | --- collectZombieJob: --- 10, [3883377]
[2025-12-16 22:58:20] 2025-12-17 03:57:49,276 | INFO     | zombie collector waiting for pid 3883377
[2025-12-16 22:58:20] 2025-12-17 03:57:49,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 22:58:20] 2025-12-17 03:57:49,277 | INFO     | collected zombie processes
[2025-12-16 22:58:20] 2025-12-17 03:57:49,277 | INFO     | will attempt to kill all subprocesses of pid=3883377
[2025-12-16 22:58:20] 2025-12-17 03:57:49,651 | INFO     | process IDs to be killed: [3883377] (in reverse order)
[2025-12-16 22:58:20] 2025-12-17 03:57:49,736 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 22:58:20] 2025-12-17 03:57:49,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 22:58:20] 2025-12-17 03:57:49,746 | INFO     | did not find any defunct processes belonging to 3883377
[2025-12-16 22:58:20] 2025-12-17 03:57:49,754 | INFO     | did not find any defunct processes belonging to 3883377
[2025-12-16 22:58:20] 2025-12-17 03:57:49,754 | INFO     | ready for new job
[2025-12-16 22:58:20] 2025-12-17 03:57:49,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 22:58:20] 2025-12-17 03:57:49,757 | INFO     | ***************************************
[2025-12-16 22:58:20] 2025-12-17 03:57:49,757 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 22:58:20] 2025-12-17 03:57:49,757 | INFO     | ***************************************
[2025-12-16 22:58:20] 2025-12-17 03:57:49,757 | INFO     | 
[2025-12-16 22:58:20] 2025-12-17 03:57:49,762 | INFO     | architecture information:
[2025-12-16 22:58:20] 2025-12-17 03:57:49,762 | INFO     | executing command: cat /etc/os-release
[2025-12-16 22:58:20] 2025-12-17 03:57:49,784 | INFO     | cat /etc/os-release:
[2025-12-16 22:58:20] NAME="CentOS Linux"
[2025-12-16 22:58:20] VERSION="7 (Core)"
[2025-12-16 22:58:20] ID="centos"
[2025-12-16 22:58:20] ID_LIKE="rhel fedora"
[2025-12-16 22:58:20] VERSION_ID="7"
[2025-12-16 22:58:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 22:58:20] ANSI_COLOR="0;31"
[2025-12-16 22:58:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 22:58:20] HOME_URL="https://www.centos.org/"
[2025-12-16 22:58:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 22:58:20] 
[2025-12-16 22:58:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 22:58:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 22:58:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 22:58:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 22:58:20] 
[2025-12-16 22:58:20] 2025-12-17 03:57:49,784 | INFO     | ***************************************
[2025-12-16 22:58:20] 2025-12-17 03:57:50,288 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/14
[2025-12-16 22:58:20] 2025-12-17 03:57:50,307 | INFO     | sufficient remaining disk space (405366898688 B)
[2025-12-16 22:58:20] 2025-12-17 03:57:50,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 22:58:20] 2025-12-17 03:57:50,308 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 22:58:20] 2025-12-17 03:57:50,308 | INFO     | update_server=False
[2025-12-16 22:58:20] 2025-12-17 03:57:50,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 22:58:20] 2025-12-17 03:57:50,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 22:58:20] 2025-12-17 03:57:50,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:58:20] 2025-12-17 03:57:50,310 | INFO     | aborting loop
[2025-12-16 22:58:20] 2025-12-17 03:57:50,598 | INFO     | all payload control threads have been joined
[2025-12-16 22:58:20] 2025-12-17 03:57:50,625 | INFO     | all job control threads have been joined
[2025-12-16 22:58:20] 2025-12-17 03:57:51,274 | INFO     | all data control threads have been joined
[2025-12-16 22:58:20] 2025-12-17 03:57:51,313 | INFO     | [job] retrieve thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,316 | INFO     | [job] job monitor thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,355 | INFO     | [job] validate thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 22:58:20] 2025-12-17 03:57:51,484 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,603 | INFO     | [payload] control thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,630 | INFO     | [job] control thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,841 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:51,911 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:52,113 | INFO     | [payload] failed_post thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:52,279 | INFO     | [data] control thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:52,544 | INFO     | [data] copytool_in thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:52,875 | INFO     | [payload] validate_post thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:53,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:58:20] 2025-12-17 03:57:53,462 | INFO     | [data] copytool_out thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:54,258 | INFO     | [job] queue monitor thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:57:54,316 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 22:58:20] 2025-12-17 03:58:02,704 | INFO     | [monitor] cgroup control has ended
[2025-12-16 22:58:20] 2025-12-17 03:58:03,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127312900536128)>', '<ExcThread(monitor, started 127312276215552)>']
[2025-12-16 22:58:20] 2025-12-17 03:58:08,375 | INFO     | all workflow threads have been joined
[2025-12-16 22:58:20] 2025-12-17 03:58:08,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 22:58:20] 2025-12-17 03:58:08,376 | INFO     | traces error code: 0
[2025-12-16 22:58:20] 2025-12-17 03:58:08,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 22:58:20] 2025-12-17 03:58:20,550 | INFO     | PID=3876420 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:58:20] 2025-12-17 03:58:20,551 | INFO     | .. there are 3 such processes running
[2025-12-16 22:58:20] 2025-12-17 03:58:20,551 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 22:58:20] 2025-12-17 03:58:20,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 22:58:20] 2025-12-17 03:58:20,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 22:58:20] 2025-12-17 03:58:20,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 22:58:20] 2025-12-17 03:58:20,552 | INFO     | [monitor] control thread has ended
[2025-12-16 22:58:20] 2025-12-17 03:58:20,685 [wrapper] ==== pilot stdout END ====
[2025-12-16 22:58:20] 2025-12-17 03:58:20,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 22:58:20] 2025-12-17 03:58:20,691 [wrapper] pilotpid: 3876420
[2025-12-16 22:58:20] 2025-12-17 03:58:20,694 [wrapper] Pilot exit status: 0
[2025-12-16 22:58:20] 2025-12-17 03:58:20,712 [wrapper] pandaids: 6930224498
[2025-12-16 22:58:20] 2025-12-17 03:58:20,766 [wrapper] cleanup supervisor_pilot 3979768 3876421
[2025-12-16 22:58:20] 2025-12-17 03:58:20,768 [wrapper] Test setup, not cleaning
[2025-12-16 22:58:20] 2025-12-17 03:58:20,771 [wrapper] apfmon messages muted
[2025-12-16 22:58:20] 2025-12-17 03:58:20,773 [wrapper] ==== wrapper stdout END ====
[2025-12-16 22:58:20] 2025-12-17 03:58:20,776 [wrapper] ==== wrapper stderr END ====
[2025-12-16 22:58:20]  *** Error codes and diagnostics ***
[2025-12-16 22:58:20]     "exeErrorCode": 0,
[2025-12-16 22:58:20]     "exeErrorDiag": "",
[2025-12-16 22:58:20]     "pilotErrorCode": 0,
[2025-12-16 22:58:20]     "pilotErrorDiag": "",
[2025-12-16 22:58:20]  *** Listing of results directory ***
[2025-12-16 22:58:20] total 336360
[2025-12-16 22:58:20] -rw-r--r-- 1 whitlerd whitlerd    579449 Dec 15 15:57 pilot3.tar.gz
[2025-12-16 22:58:20] -rw-r--r-- 1 whitlerd whitlerd      5112 Dec 15 15:57 queuedata.json
[2025-12-16 22:58:20] -rwx------ 1 whitlerd whitlerd     36322 Dec 15 15:57 runpilot2-wrapper.sh
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd       100 Dec 16 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 22:58:20] -rwxr-xr-x 1 whitlerd whitlerd      7986 Dec 16 19:42 run_atlas
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd       105 Dec 16 19:42 job.xml
[2025-12-16 22:58:20] -rw-r--r-- 2 whitlerd whitlerd 189777805 Dec 16 19:42 EVNT.47886829._000381.pool.root.1
[2025-12-16 22:58:20] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 16 19:42 start_atlas.sh
[2025-12-16 22:58:20] drwxrwx--x 2 whitlerd whitlerd      4096 Dec 16 19:42 shared
[2025-12-16 22:58:20] -rw-r--r-- 2 whitlerd whitlerd    592408 Dec 16 19:42 input.tar.gz
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 16 19:42 boinc_setup_complete
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd      9078 Dec 16 19:42 init_data.xml
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 16 19:42 boinc_lockfile
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd      2538 Dec 16 19:42 pandaJob.out
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd    987401 Dec 16 19:42 agis_schedconf.cvmfs.json
[2025-12-16 22:58:20] drwx------ 5 whitlerd whitlerd      4096 Dec 16 19:42 pilot3
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd 146662959 Dec 16 22:57 HITS.47886831._009662.pool.root.1
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd       530 Dec 16 22:57 boinc_task_state.xml
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd      1028 Dec 16 22:57 memory_monitor_summary.json
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd   1516240 Dec 16 22:57 agis_ddmendpoints.agis.ALL.json
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd    363756 Dec 16 22:57 log.47886831._009662.job.log.tgz.1
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd      7782 Dec 16 22:57 heartbeat.json
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd      8192 Dec 16 22:58 boinc_mmap_file
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd        28 Dec 16 22:58 wrapper_checkpoint.txt
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd        95 Dec 16 22:58 pilot_heartbeat.json
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd       822 Dec 16 22:58 pilotlog.txt
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd   1671849 Dec 16 22:58 log.47886831._009662.job.log.1
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd       357 Dec 16 22:58 output.list
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd       620 Dec 16 22:58 runtime_log
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd   2058240 Dec 16 22:58 result.tar.gz
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd      9037 Dec 16 22:58 runtime_log.err
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd       650 Dec 16 22:58 AimLDmtoUp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmShYKDm3nNGvm.diag
[2025-12-16 22:58:20] -rw-rw-r-- 1 whitlerd whitlerd     21243 Dec 16 22:58 stderr.txt
[2025-12-16 22:58:20] HITS file was successfully produced:
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd 146662959 Dec 16 22:57 shared/HITS.pool.root.1
[2025-12-16 22:58:20]  *** Contents of shared directory: ***
[2025-12-16 22:58:20] total 331176
[2025-12-16 22:58:20] -rw-r--r-- 2 whitlerd whitlerd 189777805 Dec 16 19:42 ATLAS.root_0
[2025-12-16 22:58:20] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 16 19:42 start_atlas.sh
[2025-12-16 22:58:20] -rw-r--r-- 2 whitlerd whitlerd    592408 Dec 16 19:42 input.tar.gz
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd 146662959 Dec 16 22:57 HITS.pool.root.1
[2025-12-16 22:58:20] -rw------- 1 whitlerd whitlerd   2058240 Dec 16 22:58 result.tar.gz
22:58:22 (3872390): run_atlas exited; CPU time 45885.909690
22:58:22 (3872390): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN