Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:40:01 (29407): wrapper (7.7.26015): starting
20:40:01 (29407): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 20:40:01] Arguments: --nthreads 8
[2025-12-16 20:40:01] Threads: 8
[2025-12-16 20:40:01] Checking for CVMFS
[2025-12-16 20:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:40:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:40:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:40:04] 2.11.2.0 28330 1286 55992 154083 3 124 15023082 25165824 4699 130560 0 1200150 99.990 231637 2935 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 20:40:04] CVMFS is ok
[2025-12-16 20:40:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:40:04] Checking for apptainer binary...
[2025-12-16 20:40:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:40:04] Running /usr/bin/apptainer --version
[2025-12-16 20:40:04] apptainer version 1.3.2-1.el7
[2025-12-16 20:40:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:40:15] cg-vwn377.simple-grid.lan
[2025-12-16 20:40:15] apptainer works
[2025-12-16 20:40:15] Set ATHENA_PROC_NUMBER=8
[2025-12-16 20:40:15] Set ATHENA_CORE_NUMBER=8
[2025-12-16 20:40:15] Starting ATLAS job with PandaID=6930759351
[2025-12-16 20:40:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 02:59:13]  *** The last 200 lines of the pilot log: ***
[2025-12-17 02:59:13] 2025-12-17 01:58:23,342 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-17 02:59:13] 2025-12-17 01:58:23,344 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6930759351/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,345 | INFO     | extracted standard info from prmon json
[2025-12-17 02:59:13] 2025-12-17 01:58:23,345 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 02:59:13] 2025-12-17 01:58:23,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 02:59:13] 2025-12-17 01:58:23,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 02:59:13] 2025-12-17 01:58:23,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 02:59:13] 2025-12-17 01:58:23,353 | INFO     | fitting pss+swap vs Time
[2025-12-17 02:59:13] 2025-12-17 01:58:23,354 | INFO     | sum of square deviations: 14588031660.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,372 | INFO     | sum of deviations: 142434581539.99945
[2025-12-17 02:59:13] 2025-12-17 01:58:23,372 | INFO     | mean x: 1765925613.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,372 | INFO     | mean y: 2460817.8891966757
[2025-12-17 02:59:13] 2025-12-17 01:58:23,373 | INFO     | intersect: -17239678600.28245
[2025-12-17 02:59:13] 2025-12-17 01:58:23,373 | INFO     | chi2: 5.889551310162243
[2025-12-17 02:59:13] 2025-12-17 01:58:23,374 | INFO     | sum of square deviations: 13990234405.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,378 | INFO     | sum of deviations: 163830420417.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,378 | INFO     | mean x: 1765925460.5
[2025-12-17 02:59:13] 2025-12-17 01:58:23,378 | INFO     | mean y: 2466207.5786516853
[2025-12-17 02:59:13] 2025-12-17 01:58:23,378 | INFO     | intersect: -20677123729.484974
[2025-12-17 02:59:13] 2025-12-17 01:58:23,379 | INFO     | chi2: 5.146436870554371
[2025-12-17 02:59:13] 2025-12-17 01:58:23,379 | INFO     | current chi2=5.146436870554371 (change=12.617505145521877 %)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,379 | INFO     | right removable region: 355
[2025-12-17 02:59:13] 2025-12-17 01:58:23,380 | INFO     | sum of square deviations: 13990234405.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,385 | INFO     | sum of deviations: 19502812243.5
[2025-12-17 02:59:13] 2025-12-17 01:58:23,385 | INFO     | mean x: 1765925765.5
[2025-12-17 02:59:13] 2025-12-17 01:58:23,385 | INFO     | mean y: 2492155.396067416
[2025-12-17 02:59:13] 2025-12-17 01:58:23,385 | INFO     | intersect: -2459262068.5500827
[2025-12-17 02:59:13] 2025-12-17 01:58:23,393 | INFO     | chi2: 1.5091923951963766
[2025-12-17 02:59:13] 2025-12-17 01:58:23,393 | INFO     | current chi2=1.5091923951963766 (change=74.37508707000633 %)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,394 | INFO     | sum of square deviations: 13408995600.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,398 | INFO     | sum of deviations: -18948886340.999996
[2025-12-17 02:59:13] 2025-12-17 01:58:23,398 | INFO     | mean x: 1765925918.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,398 | INFO     | mean y: 2502183.9715099717
[2025-12-17 02:59:13] 2025-12-17 01:58:23,398 | INFO     | intersect: 2498015681.4036427
[2025-12-17 02:59:13] 2025-12-17 01:58:23,399 | INFO     | chi2: 0.865373700271013
[2025-12-17 02:59:13] 2025-12-17 01:58:23,399 | INFO     | current chi2=0.865373700271013 (change=42.65981573817761 %)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,400 | INFO     | sum of square deviations: 12844082682.5
[2025-12-17 02:59:13] 2025-12-17 01:58:23,404 | INFO     | sum of deviations: -17410986793.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,404 | INFO     | mean x: 1765926070.5
[2025-12-17 02:59:13] 2025-12-17 01:58:23,404 | INFO     | mean y: 2501754.924855491
[2025-12-17 02:59:13] 2025-12-17 01:58:23,404 | INFO     | intersect: 2396329033.285642
[2025-12-17 02:59:13] 2025-12-17 01:58:23,405 | INFO     | chi2: 0.8503353622407593
[2025-12-17 02:59:13] 2025-12-17 01:58:23,405 | INFO     | current chi2=0.8503353622407593 (change=1.737785424440799 %)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,405 | INFO     | left removable region: 30
[2025-12-17 02:59:13] 2025-12-17 01:58:23,415 | INFO     | sum of square deviations: 10644478650.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,419 | INFO     | sum of deviations: 17688627255.999996
[2025-12-17 02:59:13] 2025-12-17 01:58:23,419 | INFO     | mean x: 1765926345.0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,419 | INFO     | mean y: 2504375.0246153846
[2025-12-17 02:59:13] 2025-12-17 01:58:23,419 | INFO     | intersect: -2932051079.061006
[2025-12-17 02:59:13] 2025-12-17 01:58:23,420 | INFO     | chi2: 0.0013398858347956441
[2025-12-17 02:59:13] 2025-12-17 01:58:23,420 | INFO     | current memory leak: 1.66 B/s (using 325 data points, chi2=0.00)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,421 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,421 | INFO     | ..............................
[2025-12-17 02:59:13] 2025-12-17 01:58:23,421 | INFO     | . Timing measurements:
[2025-12-17 02:59:13] 2025-12-17 01:58:23,421 | INFO     | . get job = 0 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,421 | INFO     | . initial setup = 7 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,422 | INFO     | . payload setup = 119 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,422 | INFO     | . stage-in = 0 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,422 | INFO     | . payload execution = 22111 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,422 | INFO     | . stage-out = 3 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,422 | INFO     | . log creation = 1 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,422 | INFO     | ..............................
[2025-12-17 02:59:13] 2025-12-17 01:58:23,567 | INFO     | 
[2025-12-17 02:59:13] 2025-12-17 01:58:23,567 | INFO     | job summary report
[2025-12-17 02:59:13] 2025-12-17 01:58:23,567 | INFO     | --------------------------------------------------
[2025-12-17 02:59:13] 2025-12-17 01:58:23,567 | INFO     | PanDA job id: 6930759351
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | task id: 47898763
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | errors: (none)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | pilot state: finished 
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | transexitcode: 0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | exeerrorcode: 0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | exeerrordiag: 
[2025-12-17 02:59:13] 2025-12-17 01:58:23,568 | INFO     | exitcode: 0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | exitmsg: OK
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | cpuconsumptiontime: 83433 s
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | nevents: 400
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | neventsw: 0
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | pid: 7367
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | pgrp: 7367
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | corecount: 8
[2025-12-17 02:59:13] 2025-12-17 01:58:23,569 | INFO     | event service: False
[2025-12-17 02:59:13] 2025-12-17 01:58:23,570 | INFO     | sizes: {0: 2283787, 1: 2283986, 12: 2283986, 23: 2284014, 33: 2284042, 44: 2284098, 55: 2284254, 65: 2284282, 76: 2284310, 85: 2284628, 87: 2284656, 22235: 2318369
[2025-12-17 02:59:13] 2025-12-17 01:58:23,570 | INFO     | --------------------------------------------------
[2025-12-17 02:59:13] 2025-12-17 01:58:23,570 | INFO     | 
[2025-12-17 02:59:13] 2025-12-17 01:58:23,570 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-17 02:59:13] 2025-12-17 01:58:23,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 02:59:13] 2025-12-17 01:58:23,951 | INFO     | job 6930759351 has completed (purged errors)
[2025-12-17 02:59:13] 2025-12-17 01:58:23,951 | INFO     | overall cleanup function is called
[2025-12-17 02:59:13] 2025-12-17 01:58:24,960 | INFO     | --- collectZombieJob: --- 10, [7367]
[2025-12-17 02:59:13] 2025-12-17 01:58:24,960 | INFO     | zombie collector waiting for pid 7367
[2025-12-17 02:59:13] 2025-12-17 01:58:24,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 02:59:13] 2025-12-17 01:58:24,961 | INFO     | collected zombie processes
[2025-12-17 02:59:13] 2025-12-17 01:58:24,961 | INFO     | will attempt to kill all subprocesses of pid=7367
[2025-12-17 02:59:13] 2025-12-17 01:58:25,106 | INFO     | process IDs to be killed: [7367] (in reverse order)
[2025-12-17 02:59:13] 2025-12-17 01:58:25,889 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 02:59:13] 2025-12-17 01:58:25,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 02:59:13] 2025-12-17 01:58:25,892 | INFO     | did not find any defunct processes belonging to 7367
[2025-12-17 02:59:13] 2025-12-17 01:58:25,896 | INFO     | did not find any defunct processes belonging to 7367
[2025-12-17 02:59:13] 2025-12-17 01:58:25,896 | INFO     | ready for new job
[2025-12-17 02:59:13] 2025-12-17 01:58:25,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 02:59:13] 2025-12-17 01:58:25,899 | INFO     | ***************************************
[2025-12-17 02:59:13] 2025-12-17 01:58:25,899 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 02:59:13] 2025-12-17 01:58:25,899 | INFO     | ***************************************
[2025-12-17 02:59:13] 2025-12-17 01:58:25,899 | INFO     | 
[2025-12-17 02:59:13] 2025-12-17 01:58:25,900 | INFO     | pilot is running in a VM
[2025-12-17 02:59:13] 2025-12-17 01:58:25,900 | INFO     | architecture information:
[2025-12-17 02:59:13] 2025-12-17 01:58:25,904 | INFO     | executing command: cat /etc/os-release
[2025-12-17 02:59:13] 2025-12-17 01:58:26,125 | INFO     | cat /etc/os-release:
[2025-12-17 02:59:13] NAME="CentOS Linux"
[2025-12-17 02:59:13] VERSION="7 (Core)"
[2025-12-17 02:59:13] ID="centos"
[2025-12-17 02:59:13] ID_LIKE="rhel fedora"
[2025-12-17 02:59:13] VERSION_ID="7"
[2025-12-17 02:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 02:59:13] ANSI_COLOR="0;31"
[2025-12-17 02:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 02:59:13] HOME_URL="https://www.centos.org/"
[2025-12-17 02:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 02:59:13] 
[2025-12-17 02:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 02:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 02:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 02:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 02:59:13] 
[2025-12-17 02:59:13] 2025-12-17 01:58:26,126 | INFO     | ***************************************
[2025-12-17 02:59:13] 2025-12-17 01:58:26,629 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-17 02:59:13] 2025-12-17 01:58:26,807 | INFO     | sufficient remaining disk space (496081305600 B)
[2025-12-17 02:59:13] 2025-12-17 01:58:26,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 02:59:13] 2025-12-17 01:58:26,808 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 02:59:13] 2025-12-17 01:58:26,808 | INFO     | update_server=False
[2025-12-17 02:59:13] 2025-12-17 01:58:26,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 02:59:13] 2025-12-17 01:58:26,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 02:59:13] 2025-12-17 01:58:26,811 | INFO     | aborting loop
[2025-12-17 02:59:13] 2025-12-17 01:58:27,213 | INFO     | all data control threads have been joined
[2025-12-17 02:59:13] 2025-12-17 01:58:27,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 02:59:13] 2025-12-17 01:58:27,814 | INFO     | [job] retrieve thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:27,817 | INFO     | [job] job monitor thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:27,847 | INFO     | [job] validate thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:27,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 02:59:13] 2025-12-17 01:58:27,908 | INFO     | all job control threads have been joined
[2025-12-17 02:59:13] 2025-12-17 01:58:28,219 | INFO     | [data] control thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:28,233 | INFO     | all payload control threads have been joined
[2025-12-17 02:59:13] 2025-12-17 01:58:28,321 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:28,343 | INFO     | [payload] failed_post thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:28,503 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:28,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 02:59:13] 2025-12-17 01:58:28,680 | INFO     | [payload] validate_post thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:28,914 | INFO     | [job] control thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:28,953 | INFO     | [data] copytool_in thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:29,200 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:29,239 | INFO     | [payload] control thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:29,329 | INFO     | [data] copytool_out thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:29,587 | INFO     | [job] queue monitor thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:31,885 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:34,320 [wrapper] supervise_pilot (15 min periods counter: 26)
[2025-12-17 02:59:13] 2025-12-17 01:58:37,047 | INFO     | job.realtimelogging is not enabled
[2025-12-17 02:59:13] 2025-12-17 01:58:38,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 02:59:13] 2025-12-17 01:58:55,673 | INFO     | PID=779 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-17 02:59:13] 2025-12-17 01:58:55,673 | INFO     | .. there are 9 such processes running
[2025-12-17 02:59:13] 2025-12-17 01:58:55,673 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 02:59:13] 2025-12-17 01:58:55,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 02:59:13] 2025-12-17 01:58:55,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 02:59:13] 2025-12-17 01:59:02,099 | INFO     | [monitor] cgroup control has ended
[2025-12-17 02:59:13] 2025-12-17 01:59:04,175 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265848076096)>', '<ExcThread(monitor, started 140265411032832)>']
[2025-12-17 02:59:13] 2025-12-17 01:59:04,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 02:59:13] 2025-12-17 01:59:04,727 | INFO     | [monitor] control thread has ended
[2025-12-17 02:59:13] 2025-12-17 01:59:09,201 | INFO     | all workflow threads have been joined
[2025-12-17 02:59:13] 2025-12-17 01:59:09,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 02:59:13] 2025-12-17 01:59:09,202 | INFO     | traces error code: 0
[2025-12-17 02:59:13] 2025-12-17 01:59:09,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 02:59:13] 2025-12-17 01:59:09,540 [wrapper] ==== pilot stdout END ====
[2025-12-17 02:59:13] 2025-12-17 01:59:09,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 02:59:13] 2025-12-17 01:59:09,632 [wrapper] pilotpid: 779
[2025-12-17 02:59:13] 2025-12-17 01:59:09,741 [wrapper] Pilot exit status: 0
[2025-12-17 02:59:13] 2025-12-17 01:59:10,281 [wrapper] pandaids: 6930759351
[2025-12-17 02:59:13] 2025-12-17 01:59:10,819 [wrapper] cleanup supervisor_pilot 13448 780
[2025-12-17 02:59:13] 2025-12-17 01:59:10,916 [wrapper] Test setup, not cleaning
[2025-12-17 02:59:13] 2025-12-17 01:59:10,975 [wrapper] apfmon messages muted
[2025-12-17 02:59:13] 2025-12-17 01:59:11,081 [wrapper] ==== wrapper stdout END ====
[2025-12-17 02:59:13] 2025-12-17 01:59:11,188 [wrapper] ==== wrapper stderr END ====
[2025-12-17 02:59:13]  *** Error codes and diagnostics ***
[2025-12-17 02:59:13]     "exeErrorCode": 0,
[2025-12-17 02:59:13]     "exeErrorDiag": "",
[2025-12-17 02:59:13]     "pilotErrorCode": 0,
[2025-12-17 02:59:13]     "pilotErrorDiag": "",
[2025-12-17 02:59:13]  *** Listing of results directory ***
[2025-12-17 02:59:13] total 445292
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc    579449 Dec 16 05:16 pilot3.tar.gz
[2025-12-17 02:59:13] -rwx------. 1 boinc boinc     36322 Dec 16 05:20 runpilot2-wrapper.sh
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc      5112 Dec 16 05:22 queuedata.json
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc       100 Dec 16 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 02:59:13] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 20:40 run_atlas
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc       105 Dec 16 20:40 job.xml
[2025-12-17 02:59:13] -rw-r--r--. 2 boinc boinc 225306577 Dec 16 20:40 EVNT.47898761._000735.pool.root.1
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc      6392 Dec 16 20:40 init_data.xml
[2025-12-17 02:59:13] -rw-r--r--. 2 boinc boinc     15847 Dec 16 20:40 start_atlas.sh
[2025-12-17 02:59:13] drwxrwx--x. 2 boinc boinc        68 Dec 16 20:40 shared
[2025-12-17 02:59:13] -rw-r--r--. 2 boinc boinc    592401 Dec 16 20:40 input.tar.gz
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc         0 Dec 16 20:40 boinc_lockfile
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc      2508 Dec 16 20:40 pandaJob.out
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc    987409 Dec 16 20:43 agis_schedconf.cvmfs.json
[2025-12-17 02:59:13] drwx------. 5 boinc boinc      4096 Dec 16 20:43 pilot3
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc 219699274 Dec 17 02:55 HITS.47898763._018872.pool.root.1
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc       531 Dec 17 02:55 boinc_task_state.xml
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc      1017 Dec 17 02:56 memory_monitor_summary.json
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc   1516240 Dec 17 02:56 agis_ddmendpoints.agis.ALL.json
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc    559420 Dec 17 02:56 log.47898763._018872.job.log.tgz.1
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc        95 Dec 17 02:58 pilot_heartbeat.json
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc      7777 Dec 17 02:58 heartbeat.json
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc      8192 Dec 17 02:58 boinc_mmap_file
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc        28 Dec 17 02:58 wrapper_checkpoint.txt
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc      4954 Dec 17 02:59 pilotlog.txt
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc   2979647 Dec 17 02:59 log.47898763._018872.job.log.1
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc       357 Dec 17 02:59 output.list
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc       620 Dec 17 02:59 runtime_log
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc   3553280 Dec 17 02:59 result.tar.gz
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc      8817 Dec 17 02:59 runtime_log.err
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc       658 Dec 17 02:59 5dmNDmtibp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm01UKDmAQvPIn.diag
[2025-12-17 02:59:13] -rw-r--r--. 1 boinc boinc     20743 Dec 17 02:59 stderr.txt
[2025-12-17 02:59:13] HITS file was successfully produced:
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc 219699274 Dec 17 02:55 shared/HITS.pool.root.1
[2025-12-17 02:59:13]  *** Contents of shared directory: ***
[2025-12-17 02:59:13] total 438648
[2025-12-17 02:59:13] -rw-r--r--. 2 boinc boinc 225306577 Dec 16 20:40 ATLAS.root_0
[2025-12-17 02:59:13] -rw-r--r--. 2 boinc boinc     15847 Dec 16 20:40 start_atlas.sh
[2025-12-17 02:59:13] -rw-r--r--. 2 boinc boinc    592401 Dec 16 20:40 input.tar.gz
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc 219699274 Dec 17 02:55 HITS.pool.root.1
[2025-12-17 02:59:13] -rw-------. 1 boinc boinc   3553280 Dec 17 02:59 result.tar.gz
02:59:15 (29407): run_atlas exited; CPU time 83783.109279
02:59:15 (29407): called boinc_finish(0)

</stderr_txt>
]]>

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