Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:33:00 (1819296): wrapper (7.7.26015): starting
20:33:00 (1819296): wrapper: running run_atlas (--nthreads 2)
[2025-12-16 20:33:00] Arguments: --nthreads 2
[2025-12-16 20:33:00] Threads: 2
[2025-12-16 20:33:00] Checking for CVMFS
[2025-12-16 20:33:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:33:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:33:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:33:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:33:00] 2.9.2.0 925053 4575 65500 154083 1 57 35517819 36864001 0 130560 0 2376868 99.986 168278 20301 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 20:33:00] CVMFS is ok
[2025-12-16 20:33:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 20:33:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 20:33:00] Further information can be found at the LHC@home message board.
[2025-12-16 20:33:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:33:00] Checking for apptainer binary...
[2025-12-16 20:33:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:33:00] Running /usr/bin/apptainer --version
[2025-12-16 20:33:00] apptainer version 1.4.1-1.1
[2025-12-16 20:33:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:33:00] atlasA219
[2025-12-16 20:33:00] apptainer works
[2025-12-16 20:33:00] Set ATHENA_PROC_NUMBER=2
[2025-12-16 20:33:00] Set ATHENA_CORE_NUMBER=2
[2025-12-16 20:33:00] Starting ATLAS job with PandaID=6929524859
[2025-12-16 20:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:28:35]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:28:35] 2025-12-16 22:27:51,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:28:35] 2025-12-16 22:27:51,166 | INFO     | ***************************************
[2025-12-16 23:28:35] 2025-12-16 22:27:51,167 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:28:35] 2025-12-16 22:27:51,167 | INFO     | ***************************************
[2025-12-16 23:28:35] 2025-12-16 22:27:51,167 | INFO     | 
[2025-12-16 23:28:35] 2025-12-16 22:27:51,168 | INFO     | architecture information:
[2025-12-16 23:28:35] 2025-12-16 22:27:51,169 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:28:35] 2025-12-16 22:27:51,198 | INFO     | cat /etc/os-release:
[2025-12-16 23:28:35] NAME="CentOS Linux"
[2025-12-16 23:28:35] VERSION="7 (Core)"
[2025-12-16 23:28:35] ID="centos"
[2025-12-16 23:28:35] ID_LIKE="rhel fedora"
[2025-12-16 23:28:35] VERSION_ID="7"
[2025-12-16 23:28:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:28:35] ANSI_COLOR="0;31"
[2025-12-16 23:28:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:28:35] HOME_URL="https://www.centos.org/"
[2025-12-16 23:28:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:28:35] 
[2025-12-16 23:28:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:28:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:28:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:28:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:28:35] 
[2025-12-16 23:28:35] 2025-12-16 22:27:51,199 | INFO     | ***************************************
[2025-12-16 23:28:35] 2025-12-16 22:27:51,703 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | INFO     | sufficient remaining disk space (175192932352 B)
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | INFO     | update_server=False
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | INFO     | aborting loop
[2025-12-16 23:28:35] 2025-12-16 22:27:51,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:28:35] 2025-12-16 22:27:51,760 | INFO     | all data control threads have been joined
[2025-12-16 23:28:35] 2025-12-16 22:27:52,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:28:35] 2025-12-16 22:27:52,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:28:35] 2025-12-16 22:27:52,664 | INFO     | all payload control threads have been joined
[2025-12-16 23:28:35] 2025-12-16 22:27:52,721 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:52,722 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:52,722 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:52,749 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:52,766 | INFO     | [data] control thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:52,855 | INFO     | all job control threads have been joined
[2025-12-16 23:28:35] 2025-12-16 22:27:53,028 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:53,328 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:53,510 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:53,670 | INFO     | [payload] control thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:53,861 | INFO     | [job] control thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:53,918 | INFO     | [job] validate thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:54,000 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:54,072 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:54,217 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:27:56,095 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:28:02,122 | INFO     | job.realtimelogging is not enabled
[2025-12-16 23:28:35] 2025-12-16 22:28:03,128 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:28:35] 2025-12-16 22:28:21,231 | INFO     | PID=1823004 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 23:28:35] 2025-12-16 22:28:21,232 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:28:35] 2025-12-16 22:28:21,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:28:35] 2025-12-16 22:28:21,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:28:35] 2025-12-16 22:28:28,919 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:28:35] 2025-12-16 22:28:30,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432636155712)>', '<ExcThread(monitor, started 140431874586368)>']
[2025-12-16 23:28:35] 2025-12-16 22:28:31,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:28:35] 2025-12-16 22:28:31,286 | INFO     | [monitor] control thread has ended
[2025-12-16 23:28:35] 2025-12-16 22:28:35,689 | INFO     | all workflow threads have been joined
[2025-12-16 23:28:35] 2025-12-16 22:28:35,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:28:35] 2025-12-16 22:28:35,690 | INFO     | traces error code: 0
[2025-12-16 23:28:35] 2025-12-16 22:28:35,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:28:35] 2025-12-16 22:28:35,734 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:28:35] 2025-12-16 22:28:35,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:28:35] 2025-12-16 22:28:35,738 [wrapper] pilotpid: 1823004
[2025-12-16 23:28:35] 2025-12-16 22:28:35,740 [wrapper] Pilot exit status: 0
[2025-12-16 23:28:35] 2025-12-16 22:28:35,746 [wrapper] pandaids: 6929524859
[2025-12-16 23:28:35] 2025-12-16 22:28:35,761 [wrapper] cleanup supervisor_pilot 1848469 1823005
[2025-12-16 23:28:35] 2025-12-16 22:28:35,763 [wrapper] Test setup, not cleaning
[2025-12-16 23:28:35] 2025-12-16 22:28:35,765 [wrapper] apfmon messages muted
[2025-12-16 23:28:35] 2025-12-16 22:28:35,768 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:28:35] 2025-12-16 22:28:35,770 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:28:35]  *** Error codes and diagnostics ***
[2025-12-16 23:28:35]     "exeErrorCode": 0,
[2025-12-16 23:28:35]     "exeErrorDiag": "",
[2025-12-16 23:28:35]     "pilotErrorCode": 0,
[2025-12-16 23:28:35]     "pilotErrorDiag": "",
[2025-12-16 23:28:35]  *** Listing of results directory ***
[2025-12-16 23:28:35] total 441408
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc    579449 Dec 15 06:25 pilot3.tar.gz
[2025-12-16 23:28:35] -rwx------ 1 boinc boinc     36322 Dec 15 06:26 runpilot2-wrapper.sh
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc      5112 Dec 15 06:27 queuedata.json
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc       100 Dec 16 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:28:35] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 20:32 run_atlas
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc       105 Dec 16 20:32 job.xml
[2025-12-16 23:28:35] -rw-r--r-- 2 boinc boinc 224316502 Dec 16 20:33 EVNT.47898761._000609.pool.root.1
[2025-12-16 23:28:35] -rw-r--r-- 2 boinc boinc    592397 Dec 16 20:33 input.tar.gz
[2025-12-16 23:28:35] -rw-r--r-- 2 boinc boinc     15847 Dec 16 20:33 start_atlas.sh
[2025-12-16 23:28:35] drwxrwx--x 2 boinc boinc      4096 Dec 16 20:33 shared
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc         0 Dec 16 20:33 boinc_setup_complete
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc      6208 Dec 16 20:33 init_data.xml
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc         0 Dec 16 20:33 boinc_lockfile
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc      2508 Dec 16 20:33 pandaJob.out
[2025-12-16 23:28:35] -rw------- 1 boinc boinc    987409 Dec 16 20:33 agis_schedconf.cvmfs.json
[2025-12-16 23:28:35] -rw------- 1 boinc boinc   1516240 Dec 16 20:33 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:28:35] drwx------ 5 boinc boinc      4096 Dec 16 20:33 pilot3
[2025-12-16 23:28:35] -rw------- 1 boinc boinc 220202703 Dec 16 23:27 HITS.47898763._013962.pool.root.1
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc       530 Dec 16 23:27 boinc_task_state.xml
[2025-12-16 23:28:35] -rw------- 1 boinc boinc      1011 Dec 16 23:27 memory_monitor_summary.json
[2025-12-16 23:28:35] -rw------- 1 boinc boinc    307096 Dec 16 23:27 log.47898763._013962.job.log.tgz.1
[2025-12-16 23:28:35] -rw------- 1 boinc boinc      7756 Dec 16 23:27 heartbeat.json
[2025-12-16 23:28:35] -rw------- 1 boinc boinc        95 Dec 16 23:28 pilot_heartbeat.json
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc      8192 Dec 16 23:28 boinc_mmap_file
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc        28 Dec 16 23:28 wrapper_checkpoint.txt
[2025-12-16 23:28:35] -rw------- 1 boinc boinc      4824 Dec 16 23:28 pilotlog.txt
[2025-12-16 23:28:35] -rw------- 1 boinc boinc   1483335 Dec 16 23:28 log.47898763._013962.job.log.1
[2025-12-16 23:28:35] -rw------- 1 boinc boinc       357 Dec 16 23:28 output.list
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc       620 Dec 16 23:28 runtime_log
[2025-12-16 23:28:35] -rw------- 1 boinc boinc   1812480 Dec 16 23:28 result.tar.gz
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc      8913 Dec 16 23:28 runtime_log.err
[2025-12-16 23:28:35] -rw------- 1 boinc boinc       665 Dec 16 23:28 CRdKDmfHGp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcHXKDmHw11Xn.diag
[2025-12-16 23:28:35] -rw-r--r-- 1 boinc boinc      9546 Dec 16 23:28 stderr.txt
[2025-12-16 23:28:35] HITS file was successfully produced:
[2025-12-16 23:28:35] -rw------- 1 boinc boinc 220202703 Dec 16 23:27 shared/HITS.pool.root.1
[2025-12-16 23:28:35]  *** Contents of shared directory: ***
[2025-12-16 23:28:35] total 436476
[2025-12-16 23:28:35] -rw-r--r-- 2 boinc boinc 224316502 Dec 16 20:33 ATLAS.root_0
[2025-12-16 23:28:35] -rw-r--r-- 2 boinc boinc    592397 Dec 16 20:33 input.tar.gz
[2025-12-16 23:28:35] -rw-r--r-- 2 boinc boinc     15847 Dec 16 20:33 start_atlas.sh
[2025-12-16 23:28:35] -rw------- 1 boinc boinc 220202703 Dec 16 23:27 HITS.pool.root.1
[2025-12-16 23:28:35] -rw------- 1 boinc boinc   1812480 Dec 16 23:28 result.tar.gz
23:28:37 (1819296): run_atlas exited; CPU time 20543.378820
23:28:37 (1819296): called boinc_finish(0)

</stderr_txt>
]]>

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