Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:05:09 (3125620): wrapper (7.7.26015): starting
18:05:09 (3125620): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 18:05:09] Arguments: --nthreads 3
[2025-12-16 18:05:09] Threads: 3
[2025-12-16 18:05:09] Checking for CVMFS
[2025-12-16 18:05:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 18:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 18:05:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 18:05:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 18:05:09] 2.9.2.0 2672154 1776 64504 154079 3 56 18642921 36864001 0 130560 0 1170674 99.989 69904 18105 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 18:05:09] CVMFS is ok
[2025-12-16 18:05:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 18:05:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 18:05:09] Further information can be found at the LHC@home message board.
[2025-12-16 18:05:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 18:05:09] Checking for apptainer binary...
[2025-12-16 18:05:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 18:05:09] Running /usr/bin/apptainer --version
[2025-12-16 18:05:09] apptainer version 1.4.1-1.1
[2025-12-16 18:05:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 18:05:09] atlasA219a
[2025-12-16 18:05:09] apptainer works
[2025-12-16 18:05:09] Set ATHENA_PROC_NUMBER=3
[2025-12-16 18:05:09] Set ATHENA_CORE_NUMBER=3
[2025-12-16 18:05:09] Starting ATLAS job with PandaID=6931011746
[2025-12-16 18:05:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 19:44:28]  *** The last 200 lines of the pilot log: ***
[2025-12-16 19:44:28]  protocol_id=None
[2025-12-16 19:44:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 19:44:28]  replicas=None
[2025-12-16 19:44:28]  scope=mc23_13p6TeV
[2025-12-16 19:44:28]  status=None
[2025-12-16 19:44:28]  status_code=0
[2025-12-16 19:44:28]  storage_token=
[2025-12-16 19:44:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6931011746/log.47886831._012986.job.log.tgz.1
[2025-12-16 19:44:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/e7/log.47886831._012986.job.log.tgz.1
[2025-12-16 19:44:28]  workdir=None
[2025-12-16 19:44:28] ]
[2025-12-16 19:44:28] 2025-12-16 18:43:40,444 | INFO     | transferring file log.47886831._012986.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6931011746/log.47886831._012986.job.log.tgz.1 to /local/data/boinc/
[2025-12-16 19:44:28] 2025-12-16 18:43:40,444 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6931011746/log.47886831._012986.job.log.tgz.1 /local/data/boinc/slots/0/log.47886831._0129
[2025-12-16 19:44:28] 2025-12-16 18:43:40,456 | INFO     | adding to output.list: log.47886831._012986.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/e7/log.47886831._012986.job.log.tg
[2025-12-16 19:44:28] 2025-12-16 18:43:40,457 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 19:44:28] 2025-12-16 18:43:40,457 | INFO     | summary of transferred files:
[2025-12-16 19:44:28] 2025-12-16 18:43:40,457 | INFO     |  -- lfn=log.47886831._012986.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 19:44:28] 2025-12-16 18:43:40,457 | INFO     | stage-out finished correctly
[2025-12-16 19:44:28] 2025-12-16 18:43:40,744 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 19:44:28] 2025-12-16 18:43:41,532 | INFO     | job 6931011746 has state=finished
[2025-12-16 19:44:28] 2025-12-16 18:43:41,532 | INFO     | preparing for final server update for job 6931011746 in state='finished'
[2025-12-16 19:44:28] 2025-12-16 18:43:41,618 | INFO     | monitor loop #454: job 0:6931011746 is in state 'finished'
[2025-12-16 19:44:28] 2025-12-16 18:43:41,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 19:44:28] 2025-12-16 18:43:42,120 | INFO     | time since job start (5907s) is within the limit (174528.0s)
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | this job has now completed (state=finished)
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | log transfer has been attempted: DONE
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | job 6931011746 has finished - writing final server update
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | total number of processed events: 400 (read)
[2025-12-16 19:44:28] 2025-12-16 18:43:42,122 | INFO     | executing command: lscpu
[2025-12-16 19:44:28] 2025-12-16 18:43:42,135 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 19:44:28] 2025-12-16 18:43:44,120 | INFO     | monitor loop #455: job 0:6931011746 is in state 'finished'
[2025-12-16 19:44:28] 2025-12-16 18:43:44,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,125 | INFO     | time since job start (5909s) is within the limit (174528.0s)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,439 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 19:44:28] 2025-12-16 18:43:44,440 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4299.687249999999
[2025-12-16 19:44:28] 2025-12-16 18:43:44,441 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6931011746/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,442 | INFO     | extracted standard info from prmon json
[2025-12-16 19:44:28] 2025-12-16 18:43:44,442 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 19:44:28] 2025-12-16 18:43:44,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 19:44:28] 2025-12-16 18:43:44,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 19:44:28] 2025-12-16 18:43:44,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | fitting pss+swap vs Time
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | sum of square deviations: 226022842.5
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | sum of deviations: -14924513363.499996
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | mean x: 1765907754.5
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | mean y: 2423774.1666666665
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | intersect: 116607071292.23123
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | chi2: 0.1932687666128667
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | current memory leak: -66.03 B/s (using 90 data points, chi2=0.19)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,443 | INFO     | could have reported an average CPU frequency of 4300 MHz (7 samples)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | ..............................
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . Timing measurements:
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . get job = 0 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . initial setup = 1 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . payload setup = 3 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . stage-in = 0 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . payload execution = 5885 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . stage-out = 0 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | . log creation = 0 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,444 | INFO     | ..............................
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | 
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | job summary report
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | --------------------------------------------------
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | PanDA job id: 6931011746
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | task id: 47886831
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | errors: (none)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 19:44:28] 2025-12-16 18:43:44,946 | INFO     | pilot state: finished 
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | transexitcode: 0
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | exeerrorcode: 0
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | exeerrordiag: 
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | exitcode: 0
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | exitmsg: OK
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | cpuconsumptiontime: 16983 s
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | nevents: 400
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | neventsw: 0
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | pid: 3135791
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | pgrp: 3135791
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | corecount: 3
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | event service: False
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | sizes: {0: 2283997, 2: 2284259, 10: 2284287, 5891: 2320127, 5892: 2320127, 5895: 2320321}
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | --------------------------------------------------
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | 
[2025-12-16 19:44:28] 2025-12-16 18:43:44,947 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | job 6931011746 has completed (purged errors)
[2025-12-16 19:44:28] 2025-12-16 18:43:44,961 | INFO     | overall cleanup function is called
[2025-12-16 19:44:28] 2025-12-16 18:43:45,967 | INFO     | --- collectZombieJob: --- 10, [3135791]
[2025-12-16 19:44:28] 2025-12-16 18:43:45,967 | INFO     | zombie collector waiting for pid 3135791
[2025-12-16 19:44:28] 2025-12-16 18:43:45,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 19:44:28] 2025-12-16 18:43:45,967 | INFO     | collected zombie processes
[2025-12-16 19:44:28] 2025-12-16 18:43:45,967 | INFO     | will attempt to kill all subprocesses of pid=3135791
[2025-12-16 19:44:28] 2025-12-16 18:43:46,005 | INFO     | process IDs to be killed: [3135791] (in reverse order)
[2025-12-16 19:44:28] 2025-12-16 18:43:46,031 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 19:44:28] 2025-12-16 18:43:46,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 19:44:28] 2025-12-16 18:43:46,032 | INFO     | did not find any defunct processes belonging to 3135791
[2025-12-16 19:44:28] 2025-12-16 18:43:46,033 | INFO     | did not find any defunct processes belonging to 3135791
[2025-12-16 19:44:28] 2025-12-16 18:43:46,033 | INFO     | ready for new job
[2025-12-16 19:44:28] 2025-12-16 18:43:46,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 19:44:28] 2025-12-16 18:43:46,034 | INFO     | ***************************************
[2025-12-16 19:44:28] 2025-12-16 18:43:46,034 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 19:44:28] 2025-12-16 18:43:46,034 | INFO     | ***************************************
[2025-12-16 19:44:28] 2025-12-16 18:43:46,034 | INFO     | 
[2025-12-16 19:44:28] 2025-12-16 18:43:46,035 | INFO     | architecture information:
[2025-12-16 19:44:28] 2025-12-16 18:43:46,035 | INFO     | executing command: cat /etc/os-release
[2025-12-16 19:44:28] 2025-12-16 18:43:46,043 | INFO     | cat /etc/os-release:
[2025-12-16 19:44:28] NAME="CentOS Linux"
[2025-12-16 19:44:28] VERSION="7 (Core)"
[2025-12-16 19:44:28] ID="centos"
[2025-12-16 19:44:28] ID_LIKE="rhel fedora"
[2025-12-16 19:44:28] VERSION_ID="7"
[2025-12-16 19:44:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 19:44:28] ANSI_COLOR="0;31"
[2025-12-16 19:44:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 19:44:28] HOME_URL="https://www.centos.org/"
[2025-12-16 19:44:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 19:44:28] 
[2025-12-16 19:44:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 19:44:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 19:44:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 19:44:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 19:44:28] 
[2025-12-16 19:44:28] 2025-12-16 18:43:46,043 | INFO     | ***************************************
[2025-12-16 19:44:28] 2025-12-16 18:43:46,545 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 19:44:28] 2025-12-16 18:43:46,555 | INFO     | sufficient remaining disk space (844493750272 B)
[2025-12-16 19:44:28] 2025-12-16 18:43:46,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 19:44:28] 2025-12-16 18:43:46,555 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 19:44:28] 2025-12-16 18:43:46,555 | INFO     | update_server=False
[2025-12-16 19:44:28] 2025-12-16 18:43:46,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 19:44:28] 2025-12-16 18:43:46,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 19:44:28] 2025-12-16 18:43:46,623 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 19:44:28] 2025-12-16 18:43:46,623 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 19:44:28] 2025-12-16 18:43:46,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 19:44:28] 2025-12-16 18:43:46,624 | INFO     | will abort loop
[2025-12-16 19:44:28] 2025-12-16 18:43:46,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 19:44:28] 2025-12-16 18:43:47,190 | INFO     | all data control threads have been joined
[2025-12-16 19:44:28] 2025-12-16 18:43:47,251 | INFO     | all payload control threads have been joined
[2025-12-16 19:44:28] 2025-12-16 18:43:47,560 | INFO     | [job] retrieve thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:47,562 | INFO     | [payload] validate_post thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:47,628 | INFO     | [job] job monitor thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:47,640 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,150 | INFO     | all job control threads have been joined
[2025-12-16 19:44:28] 2025-12-16 18:43:48,160 | INFO     | [payload] failed_post thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,195 | INFO     | [data] control thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,257 | INFO     | [payload] control thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,437 | INFO     | [data] copytool_in thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,560 | INFO     | [data] copytool_out thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,632 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,885 | INFO     | [job] validate thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:48,992 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:49,155 | INFO     | [job] control thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:49,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 19:44:28] 2025-12-16 18:43:50,491 | INFO     | [job] queue monitor thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:50,784 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:43:57,077 | INFO     | job.realtimelogging is not enabled
[2025-12-16 19:44:28] 2025-12-16 18:43:58,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 19:44:28] 2025-12-16 18:44:16,193 | INFO     | 5911s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-16 19:44:28] 2025-12-16 18:44:17,248 | INFO     | PID=3129348 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 19:44:28] 2025-12-16 18:44:17,248 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 19:44:28] 2025-12-16 18:44:17,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 19:44:28] 2025-12-16 18:44:17,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 19:44:28] 2025-12-16 18:44:23,354 | INFO     | [monitor] cgroup control has ended
[2025-12-16 19:44:28] 2025-12-16 18:44:23,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109598836544)>', '<ExcThread(monitor, started 140109231920896)>']
[2025-12-16 19:44:28] 2025-12-16 18:44:24,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 19:44:28] 2025-12-16 18:44:24,283 | INFO     | [monitor] control thread has ended
[2025-12-16 19:44:28] 2025-12-16 18:44:28,511 | INFO     | all workflow threads have been joined
[2025-12-16 19:44:28] 2025-12-16 18:44:28,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 19:44:28] 2025-12-16 18:44:28,511 | INFO     | traces error code: 0
[2025-12-16 19:44:28] 2025-12-16 18:44:28,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 19:44:28] 2025-12-16 18:44:28,569 [wrapper] ==== pilot stdout END ====
[2025-12-16 19:44:28] 2025-12-16 18:44:28,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 19:44:28] 2025-12-16 18:44:28,575 [wrapper] pilotpid: 3129348
[2025-12-16 19:44:28] 2025-12-16 18:44:28,578 [wrapper] Pilot exit status: 0
[2025-12-16 19:44:28] 2025-12-16 18:44:28,585 [wrapper] pandaids: 6931011746
[2025-12-16 19:44:28] 2025-12-16 18:44:28,603 [wrapper] cleanup supervisor_pilot 3148179 3129349
[2025-12-16 19:44:28] 2025-12-16 18:44:28,606 [wrapper] Test setup, not cleaning
[2025-12-16 19:44:28] 2025-12-16 18:44:28,609 [wrapper] apfmon messages muted
[2025-12-16 19:44:28] 2025-12-16 18:44:28,612 [wrapper] ==== wrapper stdout END ====
[2025-12-16 19:44:28] 2025-12-16 18:44:28,614 [wrapper] ==== wrapper stderr END ====
[2025-12-16 19:44:28]  *** Error codes and diagnostics ***
[2025-12-16 19:44:28]     "exeErrorCode": 0,
[2025-12-16 19:44:28]     "exeErrorDiag": "",
[2025-12-16 19:44:28]     "pilotErrorCode": 0,
[2025-12-16 19:44:28]     "pilotErrorDiag": "",
[2025-12-16 19:44:28]  *** Listing of results directory ***
[2025-12-16 19:44:28] total 333336
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc    579449 Dec 16 10:01 pilot3.tar.gz
[2025-12-16 19:44:28] -rwx------ 1 boinc boinc     36322 Dec 16 10:04 runpilot2-wrapper.sh
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc      5112 Dec 16 10:06 queuedata.json
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc       100 Dec 16 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 19:44:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 18:05 run_atlas
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc       105 Dec 16 18:05 job.xml
[2025-12-16 19:44:28] -rw-r--r-- 2 boinc boinc 192196134 Dec 16 18:05 EVNT.47886829._000532.pool.root.1
[2025-12-16 19:44:28] -rw-r--r-- 2 boinc boinc    592415 Dec 16 18:05 input.tar.gz
[2025-12-16 19:44:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 18:05 start_atlas.sh
[2025-12-16 19:44:28] drwxrwx--x 2 boinc boinc      4096 Dec 16 18:05 shared
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc         0 Dec 16 18:05 boinc_setup_complete
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc      6199 Dec 16 18:05 init_data.xml
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc         0 Dec 16 18:05 boinc_lockfile
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc      2540 Dec 16 18:05 pandaJob.out
[2025-12-16 19:44:28] -rw------- 1 boinc boinc    987401 Dec 16 18:05 agis_schedconf.cvmfs.json
[2025-12-16 19:44:28] -rw------- 1 boinc boinc   1516240 Dec 16 18:05 agis_ddmendpoints.agis.ALL.json
[2025-12-16 19:44:28] drwx------ 5 boinc boinc      4096 Dec 16 18:05 pilot3
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc       530 Dec 16 19:43 boinc_task_state.xml
[2025-12-16 19:44:28] -rw------- 1 boinc boinc 142984559 Dec 16 19:43 HITS.47886831._012986.pool.root.1
[2025-12-16 19:44:28] -rw------- 1 boinc boinc      1016 Dec 16 19:43 memory_monitor_summary.json
[2025-12-16 19:44:28] -rw------- 1 boinc boinc    262772 Dec 16 19:43 log.47886831._012986.job.log.tgz.1
[2025-12-16 19:44:28] -rw------- 1 boinc boinc      7760 Dec 16 19:43 heartbeat.json
[2025-12-16 19:44:28] -rw------- 1 boinc boinc        95 Dec 16 19:43 pilot_heartbeat.json
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc      8192 Dec 16 19:44 boinc_mmap_file
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc        27 Dec 16 19:44 wrapper_checkpoint.txt
[2025-12-16 19:44:28] -rw------- 1 boinc boinc      5125 Dec 16 19:44 pilotlog.txt
[2025-12-16 19:44:28] -rw------- 1 boinc boinc    858407 Dec 16 19:44 log.47886831._012986.job.log.1
[2025-12-16 19:44:28] -rw------- 1 boinc boinc       357 Dec 16 19:44 output.list
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc       620 Dec 16 19:44 runtime_log
[2025-12-16 19:44:28] -rw------- 1 boinc boinc   1136640 Dec 16 19:44 result.tar.gz
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc      8917 Dec 16 19:44 runtime_log.err
[2025-12-16 19:44:28] -rw------- 1 boinc boinc       662 Dec 16 19:44 0rQMDmp9fp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4QVKDmcnXjAo.diag
[2025-12-16 19:44:28] -rw-r--r-- 1 boinc boinc     21818 Dec 16 19:44 stderr.txt
[2025-12-16 19:44:28] HITS file was successfully produced:
[2025-12-16 19:44:28] -rw------- 1 boinc boinc 142984559 Dec 16 19:43 shared/HITS.pool.root.1
[2025-12-16 19:44:28]  *** Contents of shared directory: ***
[2025-12-16 19:44:28] total 329044
[2025-12-16 19:44:28] -rw-r--r-- 2 boinc boinc 192196134 Dec 16 18:05 ATLAS.root_0
[2025-12-16 19:44:28] -rw-r--r-- 2 boinc boinc    592415 Dec 16 18:05 input.tar.gz
[2025-12-16 19:44:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 18:05 start_atlas.sh
[2025-12-16 19:44:28] -rw------- 1 boinc boinc 142984559 Dec 16 19:43 HITS.pool.root.1
[2025-12-16 19:44:28] -rw------- 1 boinc boinc   1136640 Dec 16 19:44 result.tar.gz
19:44:29 (3125620): run_atlas exited; CPU time 17012.601149
19:44:29 (3125620): called boinc_finish(0)

</stderr_txt>
]]>

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