Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:02 (25332): wrapper (7.7.26015): starting
10:04:02 (25332): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 10:04:02] Arguments: --nthreads 8
[2025-12-16 10:04:02] Threads: 8
[2025-12-16 10:04:02] Checking for CVMFS
[2025-12-16 10:04:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 10:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 10:04:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 10:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 10:04:02] 2.11.2.0 2934 205779 83624 154073 1 56 14464427 20275200 1 130560 1 75520277 99.941 9935732 24488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 10:04:02] CVMFS is ok
[2025-12-16 10:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 10:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 10:04:02] Further information can be found at the LHC@home message board.
[2025-12-16 10:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 10:04:02] Checking for apptainer binary...
[2025-12-16 10:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 10:04:02] Running /usr/bin/apptainer --version
[2025-12-16 10:04:02] apptainer version 1.3.2-1.el7
[2025-12-16 10:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 10:04:04] c-204-33.aglt2.org
[2025-12-16 10:04:04] apptainer works
[2025-12-16 10:04:04] Set ATHENA_PROC_NUMBER=8
[2025-12-16 10:04:04] Set ATHENA_CORE_NUMBER=8
[2025-12-16 10:04:04] Starting ATLAS job with PandaID=6931012984
[2025-12-16 10:04:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 12:57:43]  *** The last 200 lines of the pilot log: ***
[2025-12-16 12:57:43] 2025-12-16 17:56:35,881 | INFO     | mean y: 2478259.9822485205
[2025-12-16 12:57:43] 2025-12-16 17:56:35,881 | INFO     | intersect: -31894255652.275364
[2025-12-16 12:57:43] 2025-12-16 17:56:35,881 | INFO     | chi2: 1.37593984420313
[2025-12-16 12:57:43] 2025-12-16 17:56:35,881 | INFO     | sum of square deviations: 1367709365.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,882 | INFO     | sum of deviations: 26037672520.5
[2025-12-16 12:57:43] 2025-12-16 17:56:35,882 | INFO     | mean x: 1765902463.5
[2025-12-16 12:57:43] 2025-12-16 17:56:35,883 | INFO     | mean y: 2477083.1036585364
[2025-12-16 12:57:43] 2025-12-16 17:56:35,883 | INFO     | intersect: -33615769032.91764
[2025-12-16 12:57:43] 2025-12-16 17:56:35,883 | INFO     | chi2: 1.3768639074411848
[2025-12-16 12:57:43] 2025-12-16 17:56:35,883 | INFO     | current chi2=1.3768639074411848 (change=-0.06715869461501676 %)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,883 | INFO     | right removable region: 163
[2025-12-16 12:57:43] 2025-12-16 17:56:35,884 | INFO     | sum of square deviations: 1367709365.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,884 | INFO     | sum of deviations: 2489765630.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,885 | INFO     | mean x: 1765902768.5
[2025-12-16 12:57:43] 2025-12-16 17:56:35,885 | INFO     | mean y: 2506885.463414634
[2025-12-16 12:57:43] 2025-12-16 17:56:35,885 | INFO     | intersect: -3212126377.6005893
[2025-12-16 12:57:43] 2025-12-16 17:56:35,885 | INFO     | chi2: 0.016538383307898603
[2025-12-16 12:57:43] 2025-12-16 17:56:35,885 | INFO     | current chi2=0.016538383307898603 (change=98.79803006086529 %)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,886 | INFO     | sum of square deviations: 1246386160.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,886 | INFO     | sum of deviations: 3654892957.999999
[2025-12-16 12:57:43] 2025-12-16 17:56:35,887 | INFO     | mean x: 1765902921.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,887 | INFO     | mean y: 2505406.289308176
[2025-12-16 12:57:43] 2025-12-16 17:56:35,887 | INFO     | intersect: -5175814409.516836
[2025-12-16 12:57:43] 2025-12-16 17:56:35,887 | INFO     | chi2: 0.0008809991902966901
[2025-12-16 12:57:43] 2025-12-16 17:56:35,887 | INFO     | current chi2=0.0008809991902966901 (change=94.67300295382603 %)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,888 | INFO     | sum of square deviations: 1132458442.5
[2025-12-16 12:57:43] 2025-12-16 17:56:35,888 | INFO     | sum of deviations: 2727905482.0000005
[2025-12-16 12:57:43] 2025-12-16 17:56:35,888 | INFO     | mean x: 1765903073.5
[2025-12-16 12:57:43] 2025-12-16 17:56:35,889 | INFO     | mean y: 2506642.1818181816
[2025-12-16 12:57:43] 2025-12-16 17:56:35,889 | INFO     | intersect: -4251262409.375498
[2025-12-16 12:57:43] 2025-12-16 17:56:35,889 | INFO     | chi2: 0.00026207880293858536
[2025-12-16 12:57:43] 2025-12-16 17:56:35,889 | INFO     | current chi2=0.00026207880293858536 (change=70.25209491392084 %)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,889 | INFO     | sum of square deviations: 1025693650.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,890 | INFO     | sum of deviations: 2271667694.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,890 | INFO     | mean x: 1765903226.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,890 | INFO     | mean y: 2507293.5838926174
[2025-12-16 12:57:43] 2025-12-16 17:56:35,891 | INFO     | intersect: -3908548711.525021
[2025-12-16 12:57:43] 2025-12-16 17:56:35,891 | INFO     | chi2: 0.0001960699782039567
[2025-12-16 12:57:43] 2025-12-16 17:56:35,891 | INFO     | current chi2=0.0001960699782039567 (change=25.186632415326223 %)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,891 | INFO     | sum of square deviations: 925859220.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,892 | INFO     | sum of deviations: 1910735330.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,892 | INFO     | mean x: 1765903378.5
[2025-12-16 12:57:43] 2025-12-16 17:56:35,892 | INFO     | mean y: 2507843.111111111
[2025-12-16 12:57:43] 2025-12-16 17:56:35,892 | INFO     | intersect: -3641862598.721625
[2025-12-16 12:57:43] 2025-12-16 17:56:35,893 | INFO     | chi2: 0.00015328310941009304
[2025-12-16 12:57:43] 2025-12-16 17:56:35,893 | INFO     | current chi2=0.00015328310941009304 (change=21.82224386711347 %)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,893 | INFO     | left removable region: 50
[2025-12-16 12:57:43] 2025-12-16 17:56:35,893 | INFO     | sum of square deviations: 447383272.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,894 | INFO     | sum of deviations: 888666666.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,894 | INFO     | mean x: 1765903958.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,894 | INFO     | mean y: 2509036.0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,894 | INFO     | intersect: -3505221540.9985604
[2025-12-16 12:57:43] 2025-12-16 17:56:35,894 | INFO     | chi2: 0.00011283351810265564
[2025-12-16 12:57:43] 2025-12-16 17:56:35,894 | INFO     | current memory leak: 1.99 B/s (using 113 data points, chi2=0.00)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | could have reported an average CPU frequency of 2019 MHz (9 samples)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | ..............................
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | . Timing measurements:
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | . get job = 0 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | . initial setup = 2 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | . payload setup = 8 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,895 | INFO     | . stage-in = 0 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,896 | INFO     | . payload execution = 10293 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,896 | INFO     | . stage-out = 0 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,896 | INFO     | . log creation = 0 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,896 | INFO     | ..............................
[2025-12-16 12:57:43] 2025-12-16 17:56:35,989 | INFO     | 
[2025-12-16 12:57:43] 2025-12-16 17:56:35,990 | INFO     | job summary report
[2025-12-16 12:57:43] 2025-12-16 17:56:35,990 | INFO     | --------------------------------------------------
[2025-12-16 12:57:43] 2025-12-16 17:56:35,990 | INFO     | PanDA job id: 6931012984
[2025-12-16 12:57:43] 2025-12-16 17:56:35,990 | INFO     | task id: 47898763
[2025-12-16 12:57:43] 2025-12-16 17:56:35,990 | INFO     | errors: (none)
[2025-12-16 12:57:43] 2025-12-16 17:56:35,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 12:57:43] 2025-12-16 17:56:35,991 | INFO     | pilot state: finished 
[2025-12-16 12:57:43] 2025-12-16 17:56:35,991 | INFO     | transexitcode: 0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,991 | INFO     | exeerrorcode: 0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,991 | INFO     | exeerrordiag: 
[2025-12-16 12:57:43] 2025-12-16 17:56:35,991 | INFO     | exitcode: 0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,992 | INFO     | exitmsg: OK
[2025-12-16 12:57:43] 2025-12-16 17:56:35,992 | INFO     | cpuconsumptiontime: 77973 s
[2025-12-16 12:57:43] 2025-12-16 17:56:35,992 | INFO     | nevents: 400
[2025-12-16 12:57:43] 2025-12-16 17:56:35,992 | INFO     | neventsw: 0
[2025-12-16 12:57:43] 2025-12-16 17:56:35,992 | INFO     | pid: 3183
[2025-12-16 12:57:43] 2025-12-16 17:56:35,992 | INFO     | pgrp: 3183
[2025-12-16 12:57:43] 2025-12-16 17:56:35,993 | INFO     | corecount: 8
[2025-12-16 12:57:43] 2025-12-16 17:56:35,993 | INFO     | event service: False
[2025-12-16 12:57:43] 2025-12-16 17:56:35,993 | INFO     | sizes: {0: 2283130, 1: 2283986, 7: 2284248, 12: 2284276, 10306: 2312979, 10307: 2321977, 10310: 2322161, 10318: 2322419}
[2025-12-16 12:57:43] 2025-12-16 17:56:35,993 | INFO     | --------------------------------------------------
[2025-12-16 12:57:43] 2025-12-16 17:56:35,993 | INFO     | 
[2025-12-16 12:57:43] 2025-12-16 17:56:35,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 12:57:43] 2025-12-16 17:56:36,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 12:57:43] 2025-12-16 17:56:36,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 12:57:43] 2025-12-16 17:56:36,027 | INFO     | job 6931012984 has completed (purged errors)
[2025-12-16 12:57:43] 2025-12-16 17:56:36,027 | INFO     | overall cleanup function is called
[2025-12-16 12:57:43] 2025-12-16 17:56:37,035 | INFO     | --- collectZombieJob: --- 10, [3183]
[2025-12-16 12:57:43] 2025-12-16 17:56:37,035 | INFO     | zombie collector waiting for pid 3183
[2025-12-16 12:57:43] 2025-12-16 17:56:37,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 12:57:43] 2025-12-16 17:56:37,036 | INFO     | collected zombie processes
[2025-12-16 12:57:43] 2025-12-16 17:56:37,036 | INFO     | will attempt to kill all subprocesses of pid=3183
[2025-12-16 12:57:43] 2025-12-16 17:56:37,125 | INFO     | process IDs to be killed: [3183] (in reverse order)
[2025-12-16 12:57:43] 2025-12-16 17:56:37,181 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 12:57:43] 2025-12-16 17:56:37,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 12:57:43] 2025-12-16 17:56:37,186 | INFO     | did not find any defunct processes belonging to 3183
[2025-12-16 12:57:43] 2025-12-16 17:56:37,189 | INFO     | did not find any defunct processes belonging to 3183
[2025-12-16 12:57:43] 2025-12-16 17:56:37,189 | INFO     | ready for new job
[2025-12-16 12:57:43] 2025-12-16 17:56:37,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 12:57:43] 2025-12-16 17:56:37,191 | INFO     | ***************************************
[2025-12-16 12:57:43] 2025-12-16 17:56:37,191 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 12:57:43] 2025-12-16 17:56:37,191 | INFO     | ***************************************
[2025-12-16 12:57:43] 2025-12-16 17:56:37,191 | INFO     | 
[2025-12-16 12:57:43] 2025-12-16 17:56:37,191 | INFO     | architecture information:
[2025-12-16 12:57:43] 2025-12-16 17:56:37,192 | INFO     | executing command: cat /etc/os-release
[2025-12-16 12:57:43] 2025-12-16 17:56:37,209 | INFO     | cat /etc/os-release:
[2025-12-16 12:57:43] NAME="CentOS Linux"
[2025-12-16 12:57:43] VERSION="7 (Core)"
[2025-12-16 12:57:43] ID="centos"
[2025-12-16 12:57:43] ID_LIKE="rhel fedora"
[2025-12-16 12:57:43] VERSION_ID="7"
[2025-12-16 12:57:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 12:57:43] ANSI_COLOR="0;31"
[2025-12-16 12:57:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 12:57:43] HOME_URL="https://www.centos.org/"
[2025-12-16 12:57:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 12:57:43] 
[2025-12-16 12:57:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 12:57:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 12:57:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 12:57:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 12:57:43] 
[2025-12-16 12:57:43] 2025-12-16 17:56:37,210 | INFO     | ***************************************
[2025-12-16 12:57:43] 2025-12-16 17:56:37,713 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 12:57:43] 2025-12-16 17:56:37,733 | INFO     | sufficient remaining disk space (18546163712 B)
[2025-12-16 12:57:43] 2025-12-16 17:56:37,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 12:57:43] 2025-12-16 17:56:37,734 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 12:57:43] 2025-12-16 17:56:37,734 | INFO     | update_server=False
[2025-12-16 12:57:43] 2025-12-16 17:56:37,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 12:57:43] 2025-12-16 17:56:37,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:57:43] 2025-12-16 17:56:37,735 | INFO     | aborting loop
[2025-12-16 12:57:43] 2025-12-16 17:56:37,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:57:43] 2025-12-16 17:56:37,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 12:57:43] 2025-12-16 17:56:38,048 | INFO     | all job control threads have been joined
[2025-12-16 12:57:43] 2025-12-16 17:56:38,337 | INFO     | all payload control threads have been joined
[2025-12-16 12:57:43] 2025-12-16 17:56:38,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 12:57:43] 2025-12-16 17:56:38,644 | INFO     | all data control threads have been joined
[2025-12-16 12:57:43] 2025-12-16 17:56:38,736 | INFO     | [job] retrieve thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:38,740 | INFO     | [job] job monitor thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:38,741 | INFO     | [job] queue monitor thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,054 | INFO     | [job] control thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,200 | INFO     | [payload] validate_post thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,340 | INFO     | [payload] control thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,601 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,649 | INFO     | [data] control thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,703 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,808 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,821 | INFO     | [data] copytool_out thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,829 | INFO     | [data] copytool_in thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:39,853 | INFO     | [job] validate thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:40,276 | INFO     | [payload] failed_post thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:42,368 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:56:47,917 | INFO     | job.realtimelogging is not enabled
[2025-12-16 12:57:43] 2025-12-16 17:56:48,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 12:57:43] 2025-12-16 17:57:07,418 | INFO     | PID=29038 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 12:57:43] 2025-12-16 17:57:07,419 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 12:57:43] 2025-12-16 17:57:07,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 12:57:43] 2025-12-16 17:57:07,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 12:57:43] 2025-12-16 17:57:37,540 | INFO     | [monitor] cgroup control has ended
[2025-12-16 12:57:43] 2025-12-16 17:57:38,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341437003584)>', '<ExcThread(monitor, started 140340824610560)>']
[2025-12-16 12:57:43] 2025-12-16 17:57:38,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 12:57:43] 2025-12-16 17:57:38,551 | INFO     | [monitor] control thread has ended
[2025-12-16 12:57:43] 2025-12-16 17:57:43,097 | INFO     | all workflow threads have been joined
[2025-12-16 12:57:43] 2025-12-16 17:57:43,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 12:57:43] 2025-12-16 17:57:43,110 | INFO     | traces error code: 0
[2025-12-16 12:57:43] 2025-12-16 17:57:43,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 12:57:43] 2025-12-16 17:57:43,225 [wrapper] ==== pilot stdout END ====
[2025-12-16 12:57:43] 2025-12-16 17:57:43,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 12:57:43] 2025-12-16 17:57:43,234 [wrapper] pilotpid: 29038
[2025-12-16 12:57:43] 2025-12-16 17:57:43,238 [wrapper] Pilot exit status: 0
[2025-12-16 12:57:43] 2025-12-16 17:57:43,253 [wrapper] pandaids: 6931012984
[2025-12-16 12:57:43] 2025-12-16 17:57:43,304 [wrapper] cleanup supervisor_pilot 12201 29039
[2025-12-16 12:57:43] 2025-12-16 17:57:43,308 [wrapper] Test setup, not cleaning
[2025-12-16 12:57:43] 2025-12-16 17:57:43,313 [wrapper] apfmon messages muted
[2025-12-16 12:57:43] 2025-12-16 17:57:43,317 [wrapper] ==== wrapper stdout END ====
[2025-12-16 12:57:43] 2025-12-16 17:57:43,322 [wrapper] ==== wrapper stderr END ====
[2025-12-16 12:57:43]  *** Error codes and diagnostics ***
[2025-12-16 12:57:43]     "exeErrorCode": 0,
[2025-12-16 12:57:43]     "exeErrorDiag": "",
[2025-12-16 12:57:43]     "pilotErrorCode": 0,
[2025-12-16 12:57:43]     "pilotErrorDiag": "",
[2025-12-16 12:57:43]  *** Listing of results directory ***
[2025-12-16 12:57:43] total 438084
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 04:01 pilot3.tar.gz
[2025-12-16 12:57:43] -rwx------ 1 boincer umatlas     36322 Dec 16 04:01 runpilot2-wrapper.sh
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 04:03 queuedata.json
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas       100 Dec 16 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 12:57:43] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 10:04 run_atlas
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas       105 Dec 16 10:04 job.xml
[2025-12-16 12:57:43] -rw-r--r-- 2 boincer umatlas 222802395 Dec 16 10:04 EVNT.47898761._000758.pool.root.1
[2025-12-16 12:57:43] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 10:04 start_atlas.sh
[2025-12-16 12:57:43] drwxrwx--x 2 boincer umatlas      4096 Dec 16 10:04 shared
[2025-12-16 12:57:43] -rw-r--r-- 2 boincer umatlas    592398 Dec 16 10:04 input.tar.gz
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas         0 Dec 16 10:04 boinc_lockfile
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas      2508 Dec 16 10:04 pandaJob.out
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas        57 Dec 16 10:04 setup.sh.local
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas    987355 Dec 16 10:04 agis_schedconf.cvmfs.json
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas   1516240 Dec 16 10:04 agis_ddmendpoints.agis.ALL.json
[2025-12-16 12:57:43] drwx------ 5 boincer umatlas      4096 Dec 16 10:04 pilot3
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas      5911 Dec 16 12:54 init_data.xml
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas 218168548 Dec 16 12:55 HITS.47898763._019486.pool.root.1
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas       530 Dec 16 12:56 boinc_task_state.xml
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas      1049 Dec 16 12:56 memory_monitor_summary.json
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas    417351 Dec 16 12:56 log.47898763._019486.job.log.tgz.1
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas      7849 Dec 16 12:56 heartbeat.json
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas        95 Dec 16 12:57 pilot_heartbeat.json
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 12:57 boinc_mmap_file
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas        28 Dec 16 12:57 wrapper_checkpoint.txt
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas      4818 Dec 16 12:57 pilotlog.txt
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas   1435217 Dec 16 12:57 log.47898763._019486.job.log.1
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas       357 Dec 16 12:57 output.list
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas       620 Dec 16 12:57 runtime_log
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas   1873920 Dec 16 12:57 result.tar.gz
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas      9343 Dec 16 12:57 runtime_log.err
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas       663 Dec 16 12:57 jmINDmS7fp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjoZKDmoSZW7m.diag
[2025-12-16 12:57:43] -rw-r--r-- 1 boincer umatlas     20872 Dec 16 12:57 stderr.txt
[2025-12-16 12:57:43] HITS file was successfully produced:
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas 218168548 Dec 16 12:55 shared/HITS.pool.root.1
[2025-12-16 12:57:43]  *** Contents of shared directory: ***
[2025-12-16 12:57:43] total 433076
[2025-12-16 12:57:43] -rw-r--r-- 2 boincer umatlas 222802395 Dec 16 10:04 ATLAS.root_0
[2025-12-16 12:57:43] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 10:04 start_atlas.sh
[2025-12-16 12:57:43] -rw-r--r-- 2 boincer umatlas    592398 Dec 16 10:04 input.tar.gz
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas 218168548 Dec 16 12:55 HITS.pool.root.1
[2025-12-16 12:57:43] -rw------- 1 boincer umatlas   1873920 Dec 16 12:57 result.tar.gz
12:57:44 (25332): run_atlas exited; CPU time 77921.663575
12:57:44 (25332): called boinc_finish(0)

</stderr_txt>
]]>

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