Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:39:50 (31006): wrapper (7.7.26015): starting
09:39:50 (31006): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 09:39:50] Arguments: --nthreads 8
[2025-12-16 09:39:50] Threads: 8
[2025-12-16 09:39:50] Checking for CVMFS
[2025-12-16 09:39:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 09:39:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 09:39:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 09:39:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 09:39:51] 2.11.2.0 2929 21518 80528 154073 2 57 13823697 20275201 1 130560 0 6432308 99.892 1214355 28311 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 09:39:51] CVMFS is ok
[2025-12-16 09:39:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 09:39:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 09:39:51] Further information can be found at the LHC@home message board.
[2025-12-16 09:39:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 09:39:51] Checking for apptainer binary...
[2025-12-16 09:39:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 09:39:51] Running /usr/bin/apptainer --version
[2025-12-16 09:39:51] apptainer version 1.3.2-1.el7
[2025-12-16 09:39:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 09:39:53] c-115-9.aglt2.org
[2025-12-16 09:39:53] apptainer works
[2025-12-16 09:39:53] Set ATHENA_PROC_NUMBER=8
[2025-12-16 09:39:53] Set ATHENA_CORE_NUMBER=8
[2025-12-16 09:39:53] Starting ATLAS job with PandaID=6931012271
[2025-12-16 09:39:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 11:39:30]  *** The last 200 lines of the pilot log: ***
[2025-12-16 11:39:30] 2025-12-16 16:38:58,271 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-12-16 11:39:30] 2025-12-16 16:38:58,273 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931012271/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,274 | INFO     | extracted standard info from prmon json
[2025-12-16 11:39:30] 2025-12-16 16:38:58,274 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 11:39:30] 2025-12-16 16:38:58,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 11:39:30] 2025-12-16 16:38:58,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 11:39:30] 2025-12-16 16:38:58,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 11:39:30] 2025-12-16 16:38:58,277 | INFO     | fitting pss+swap vs Time
[2025-12-16 11:39:30] 2025-12-16 16:38:58,278 | INFO     | sum of square deviations: 496597218.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,278 | INFO     | sum of deviations: -4984114190.000003
[2025-12-16 11:39:30] 2025-12-16 16:38:58,279 | INFO     | mean x: 1765899579.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,279 | INFO     | mean y: 2492317.777777778
[2025-12-16 11:39:30] 2025-12-16 16:38:58,279 | INFO     | intersect: 17726001090.65401
[2025-12-16 11:39:30] 2025-12-16 16:38:58,279 | INFO     | chi2: 2.2697294174554834
[2025-12-16 11:39:30] 2025-12-16 16:38:58,279 | INFO     | sum of square deviations: 435610028.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,280 | INFO     | sum of deviations: 2797661330.500001
[2025-12-16 11:39:30] 2025-12-16 16:38:58,280 | INFO     | mean x: 1765899426.5
[2025-12-16 11:39:30] 2025-12-16 16:38:58,280 | INFO     | mean y: 2511109.151785714
[2025-12-16 11:39:30] 2025-12-16 16:38:58,280 | INFO     | intersect: -11338799286.648329
[2025-12-16 11:39:30] 2025-12-16 16:38:58,281 | INFO     | chi2: 1.5079412480063195
[2025-12-16 11:39:30] 2025-12-16 16:38:58,281 | INFO     | current chi2=1.5079412480063195 (change=33.56295087822313 %)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,281 | INFO     | sum of square deviations: 379832238.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | sum of deviations: 2716497567.000003
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | mean x: 1765899274.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | mean y: 2510887.2897196263
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | intersect: -12626909687.032545
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | chi2: 1.509447906467842
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | current chi2=1.509447906467842 (change=-0.09991493126901543 %)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,282 | INFO     | right removable region: 106
[2025-12-16 11:39:30] 2025-12-16 16:38:58,283 | INFO     | sum of square deviations: 435610028.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,283 | INFO     | sum of deviations: -20962696055.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,283 | INFO     | mean x: 1765899731.5
[2025-12-16 11:39:30] 2025-12-16 16:38:58,283 | INFO     | mean y: 2531410.410714286
[2025-12-16 11:39:30] 2025-12-16 16:38:58,284 | INFO     | intersect: 84982253996.22917
[2025-12-16 11:39:30] 2025-12-16 16:38:58,284 | INFO     | chi2: 0.9133833959026993
[2025-12-16 11:39:30] 2025-12-16 16:38:58,284 | INFO     | current chi2=0.9133833959026993 (change=59.75804918074056 %)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,284 | INFO     | sum of square deviations: 379832238.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | sum of deviations: -18568919354.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | mean x: 1765899884.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | mean y: 2524753.2429906544
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | intersect: 86332354748.4367
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | chi2: 0.9043550247479278
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | current chi2=0.9043550247479278 (change=0.988453610528878 %)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,285 | INFO     | left removable region: 20
[2025-12-16 11:39:30] 2025-12-16 16:38:58,286 | INFO     | sum of square deviations: 197203697.5
[2025-12-16 11:39:30] 2025-12-16 16:38:58,286 | INFO     | sum of deviations: -3747463996.0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,286 | INFO     | mean x: 1765899853.5
[2025-12-16 11:39:30] 2025-12-16 16:38:58,286 | INFO     | mean y: 2522752.2558139535
[2025-12-16 11:39:30] 2025-12-16 16:38:58,286 | INFO     | intersect: 33559936763.384712
[2025-12-16 11:39:30] 2025-12-16 16:38:58,286 | INFO     | chi2: 0.06026784286720471
[2025-12-16 11:39:30] 2025-12-16 16:38:58,287 | INFO     | current memory leak: -19.00 B/s (using 86 data points, chi2=0.06)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,287 | INFO     | could have reported an average CPU frequency of 2085 MHz (7 samples)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,287 | INFO     | ..............................
[2025-12-16 11:39:30] 2025-12-16 16:38:58,287 | INFO     | . Timing measurements:
[2025-12-16 11:39:30] 2025-12-16 16:38:58,287 | INFO     | . get job = 0 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,287 | INFO     | . initial setup = 2 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,288 | INFO     | . payload setup = 8 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,288 | INFO     | . stage-in = 0 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,288 | INFO     | . payload execution = 7087 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,288 | INFO     | . stage-out = 0 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,288 | INFO     | . log creation = 0 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,288 | INFO     | ..............................
[2025-12-16 11:39:30] 2025-12-16 16:38:58,371 | INFO     | 
[2025-12-16 11:39:30] 2025-12-16 16:38:58,371 | INFO     | job summary report
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | --------------------------------------------------
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | PanDA job id: 6931012271
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | task id: 47886933
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | errors: (none)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | pilot state: finished 
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | transexitcode: 0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | exeerrorcode: 0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,372 | INFO     | exeerrordiag: 
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | exitcode: 0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | exitmsg: OK
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | cpuconsumptiontime: 52916 s
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | nevents: 400
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | neventsw: 0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | pid: 8896
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | pgrp: 8896
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | corecount: 8
[2025-12-16 11:39:30] 2025-12-16 16:38:58,373 | INFO     | event service: False
[2025-12-16 11:39:30] 2025-12-16 16:38:58,374 | INFO     | sizes: {0: 2283965, 6: 2284227, 11: 2284255, 7099: 2311521, 7100: 2320519, 7103: 2320575, 7111: 2320897}
[2025-12-16 11:39:30] 2025-12-16 16:38:58,374 | INFO     | --------------------------------------------------
[2025-12-16 11:39:30] 2025-12-16 16:38:58,374 | INFO     | 
[2025-12-16 11:39:30] 2025-12-16 16:38:58,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 11:39:30] 2025-12-16 16:38:58,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,403 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,406 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 11:39:30] 2025-12-16 16:38:58,407 | INFO     | job 6931012271 has completed (purged errors)
[2025-12-16 11:39:30] 2025-12-16 16:38:58,407 | INFO     | overall cleanup function is called
[2025-12-16 11:39:30] 2025-12-16 16:38:59,415 | INFO     | --- collectZombieJob: --- 10, [8896]
[2025-12-16 11:39:30] 2025-12-16 16:38:59,416 | INFO     | zombie collector waiting for pid 8896
[2025-12-16 11:39:30] 2025-12-16 16:38:59,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 11:39:30] 2025-12-16 16:38:59,416 | INFO     | collected zombie processes
[2025-12-16 11:39:30] 2025-12-16 16:38:59,416 | INFO     | will attempt to kill all subprocesses of pid=8896
[2025-12-16 11:39:30] 2025-12-16 16:38:59,503 | INFO     | process IDs to be killed: [8896] (in reverse order)
[2025-12-16 11:39:30] 2025-12-16 16:38:59,550 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 11:39:30] 2025-12-16 16:38:59,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 11:39:30] 2025-12-16 16:38:59,554 | INFO     | did not find any defunct processes belonging to 8896
[2025-12-16 11:39:30] 2025-12-16 16:38:59,557 | INFO     | did not find any defunct processes belonging to 8896
[2025-12-16 11:39:30] 2025-12-16 16:38:59,557 | INFO     | ready for new job
[2025-12-16 11:39:30] 2025-12-16 16:38:59,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 11:39:30] 2025-12-16 16:38:59,559 | INFO     | ***************************************
[2025-12-16 11:39:30] 2025-12-16 16:38:59,560 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 11:39:30] 2025-12-16 16:38:59,560 | INFO     | ***************************************
[2025-12-16 11:39:30] 2025-12-16 16:38:59,560 | INFO     | 
[2025-12-16 11:39:30] 2025-12-16 16:38:59,560 | INFO     | architecture information:
[2025-12-16 11:39:30] 2025-12-16 16:38:59,561 | INFO     | executing command: cat /etc/os-release
[2025-12-16 11:39:30] 2025-12-16 16:38:59,579 | INFO     | cat /etc/os-release:
[2025-12-16 11:39:30] NAME="CentOS Linux"
[2025-12-16 11:39:30] VERSION="7 (Core)"
[2025-12-16 11:39:30] ID="centos"
[2025-12-16 11:39:30] ID_LIKE="rhel fedora"
[2025-12-16 11:39:30] VERSION_ID="7"
[2025-12-16 11:39:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 11:39:30] ANSI_COLOR="0;31"
[2025-12-16 11:39:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 11:39:30] HOME_URL="https://www.centos.org/"
[2025-12-16 11:39:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 11:39:30] 
[2025-12-16 11:39:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 11:39:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 11:39:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 11:39:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 11:39:30] 
[2025-12-16 11:39:30] 2025-12-16 16:38:59,579 | INFO     | ***************************************
[2025-12-16 11:39:30] 2025-12-16 16:39:00,082 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 11:39:30] 2025-12-16 16:39:00,102 | INFO     | sufficient remaining disk space (18687721472 B)
[2025-12-16 11:39:30] 2025-12-16 16:39:00,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 11:39:30] 2025-12-16 16:39:00,102 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 11:39:30] 2025-12-16 16:39:00,103 | INFO     | update_server=False
[2025-12-16 11:39:30] 2025-12-16 16:39:00,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 11:39:30] 2025-12-16 16:39:00,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:39:30] 2025-12-16 16:39:00,188 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 11:39:30] 2025-12-16 16:39:00,188 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 11:39:30] 2025-12-16 16:39:00,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:39:30] 2025-12-16 16:39:00,189 | INFO     | will abort loop
[2025-12-16 11:39:30] 2025-12-16 16:39:00,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 11:39:30] 2025-12-16 16:39:00,737 | INFO     | all payload control threads have been joined
[2025-12-16 11:39:30] 2025-12-16 16:39:00,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 11:39:30] 2025-12-16 16:39:00,873 | INFO     | all data control threads have been joined
[2025-12-16 11:39:30] 2025-12-16 16:39:01,108 | INFO     | [job] queue monitor thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,109 | INFO     | [job] retrieve thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,198 | INFO     | [job] job monitor thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,260 | INFO     | all job control threads have been joined
[2025-12-16 11:39:30] 2025-12-16 16:39:01,743 | INFO     | [payload] control thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,851 | INFO     | [payload] validate_post thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,878 | INFO     | [data] control thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,942 | INFO     | [payload] failed_post thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,956 | INFO     | [job] validate thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,964 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:01,968 | INFO     | [data] copytool_in thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:02,263 | INFO     | [job] control thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:02,296 | INFO     | [data] copytool_out thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:02,380 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:02,439 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:04,755 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:10,426 | INFO     | job.realtimelogging is not enabled
[2025-12-16 11:39:30] 2025-12-16 16:39:11,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 11:39:30] 2025-12-16 16:39:21,191 | INFO     | [monitor] cgroup control has ended
[2025-12-16 11:39:30] 2025-12-16 16:39:21,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310356719424)>', '<ExcThread(monitor, started 140309317015296)>']
[2025-12-16 11:39:30] 2025-12-16 16:39:26,861 | INFO     | all workflow threads have been joined
[2025-12-16 11:39:30] 2025-12-16 16:39:26,861 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 11:39:30] 2025-12-16 16:39:26,862 | INFO     | traces error code: 0
[2025-12-16 11:39:30] 2025-12-16 16:39:26,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 11:39:30] 2025-12-16 16:39:30,404 | INFO     | PID=2426 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 11:39:30] 2025-12-16 16:39:30,405 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 11:39:30] 2025-12-16 16:39:30,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 11:39:30] 2025-12-16 16:39:30,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 11:39:30] 2025-12-16 16:39:30,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 11:39:30] 2025-12-16 16:39:30,405 | CRITICAL | thread 'MainThread' is not alive
[2025-12-16 11:39:30] 2025-12-16 16:39:30,405 | INFO     | [monitor] control thread has ended
[2025-12-16 11:39:30] 2025-12-16 16:39:30,520 [wrapper] ==== pilot stdout END ====
[2025-12-16 11:39:30] 2025-12-16 16:39:30,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 11:39:30] 2025-12-16 16:39:30,528 [wrapper] pilotpid: 2426
[2025-12-16 11:39:30] 2025-12-16 16:39:30,533 [wrapper] Pilot exit status: 0
[2025-12-16 11:39:30] 2025-12-16 16:39:30,551 [wrapper] pandaids: 6931012271
[2025-12-16 11:39:30] 2025-12-16 16:39:30,593 [wrapper] cleanup supervisor_pilot 29782 2427
[2025-12-16 11:39:30] 2025-12-16 16:39:30,597 [wrapper] Test setup, not cleaning
[2025-12-16 11:39:30] 2025-12-16 16:39:30,602 [wrapper] apfmon messages muted
[2025-12-16 11:39:30] 2025-12-16 16:39:30,606 [wrapper] ==== wrapper stdout END ====
[2025-12-16 11:39:30] 2025-12-16 16:39:30,611 [wrapper] ==== wrapper stderr END ====
[2025-12-16 11:39:30]  *** Error codes and diagnostics ***
[2025-12-16 11:39:30]     "exeErrorCode": 0,
[2025-12-16 11:39:30]     "exeErrorDiag": "",
[2025-12-16 11:39:30]     "pilotErrorCode": 0,
[2025-12-16 11:39:30]     "pilotErrorDiag": "",
[2025-12-16 11:39:30]  *** Listing of results directory ***
[2025-12-16 11:39:30] total 329312
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 04:01 pilot3.tar.gz
[2025-12-16 11:39:30] -rwx------ 1 boincer umatlas     36322 Dec 16 04:01 runpilot2-wrapper.sh
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 04:02 queuedata.json
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas       100 Dec 16 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 11:39:30] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 09:39 run_atlas
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas       105 Dec 16 09:39 job.xml
[2025-12-16 11:39:30] -rw-r--r-- 2 boincer umatlas 191391568 Dec 16 09:39 EVNT.47886929._000247.pool.root.1
[2025-12-16 11:39:30] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 09:39 start_atlas.sh
[2025-12-16 11:39:30] drwxrwx--x 2 boincer umatlas      4096 Dec 16 09:39 shared
[2025-12-16 11:39:30] -rw-r--r-- 2 boincer umatlas    592400 Dec 16 09:39 input.tar.gz
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas         0 Dec 16 09:39 boinc_lockfile
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas      2513 Dec 16 09:39 pandaJob.out
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas        57 Dec 16 09:39 setup.sh.local
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas    987355 Dec 16 09:40 agis_schedconf.cvmfs.json
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas   1516240 Dec 16 09:40 agis_ddmendpoints.agis.ALL.json
[2025-12-16 11:39:30] drwx------ 5 boincer umatlas      4096 Dec 16 09:40 pilot3
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas      5909 Dec 16 11:37 init_data.xml
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas 139163726 Dec 16 11:38 HITS.47886933._006395.pool.root.1
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas       529 Dec 16 11:38 boinc_task_state.xml
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas      1048 Dec 16 11:38 memory_monitor_summary.json
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas        95 Dec 16 11:38 pilot_heartbeat.json
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas    369676 Dec 16 11:38 log.47886933._006395.job.log.tgz.1
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas      7842 Dec 16 11:38 heartbeat.json
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 11:39 boinc_mmap_file
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas        27 Dec 16 11:39 wrapper_checkpoint.txt
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas       814 Dec 16 11:39 pilotlog.txt
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas   1005410 Dec 16 11:39 log.47886933._006395.job.log.1
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas       357 Dec 16 11:39 output.list
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas       620 Dec 16 11:39 runtime_log
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas   1392640 Dec 16 11:39 result.tar.gz
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas      9337 Dec 16 11:39 runtime_log.err
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas       658 Dec 16 11:39 pnFODm66fp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4kZKDmUxPgKo.diag
[2025-12-16 11:39:30] -rw-r--r-- 1 boincer umatlas     20998 Dec 16 11:39 stderr.txt
[2025-12-16 11:39:30] HITS file was successfully produced:
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas 139163726 Dec 16 11:38 shared/HITS.pool.root.1
[2025-12-16 11:39:30]  *** Contents of shared directory: ***
[2025-12-16 11:39:30] total 324772
[2025-12-16 11:39:30] -rw-r--r-- 2 boincer umatlas 191391568 Dec 16 09:39 ATLAS.root_0
[2025-12-16 11:39:30] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 09:39 start_atlas.sh
[2025-12-16 11:39:30] -rw-r--r-- 2 boincer umatlas    592400 Dec 16 09:39 input.tar.gz
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas 139163726 Dec 16 11:38 HITS.pool.root.1
[2025-12-16 11:39:30] -rw------- 1 boincer umatlas   1392640 Dec 16 11:39 result.tar.gz
11:39:32 (31006): run_atlas exited; CPU time 52929.777900
11:39:32 (31006): called boinc_finish(0)

</stderr_txt>
]]>

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