Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:55:54 (191064): wrapper (7.7.26015): starting
23:55:54 (191064): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 23:55:54] Arguments: --nthreads 3
[2025-12-16 23:55:54] Threads: 3
[2025-12-16 23:55:54] Checking for CVMFS
[2025-12-16 23:55:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 23:55:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 23:55:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 23:55:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 23:55:54] 2.9.2.0 3010767 5253 89860 154090 1 57 23376296 36864000 0 130560 0 3625267 99.990 190411 15496 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 23:55:54] CVMFS is ok
[2025-12-16 23:55:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 23:55:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 23:55:54] Further information can be found at the LHC@home message board.
[2025-12-16 23:55:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 23:55:54] Checking for apptainer binary...
[2025-12-16 23:55:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 23:55:54] Running /usr/bin/apptainer --version
[2025-12-16 23:55:54] apptainer version 1.4.1-1.1
[2025-12-16 23:55:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 23:55:54] thA367a
[2025-12-16 23:55:54] apptainer works
[2025-12-16 23:55:54] Set ATHENA_PROC_NUMBER=3
[2025-12-16 23:55:54] Set ATHENA_CORE_NUMBER=3
[2025-12-16 23:55:54] Starting ATLAS job with PandaID=6930662012
[2025-12-16 23:55:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 01:23:12]  *** The last 200 lines of the pilot log: ***
[2025-12-17 01:23:12]  is_altstaged=None
[2025-12-17 01:23:12]  is_tar=False
[2025-12-17 01:23:12]  lfn=log.47886831._011385.job.log.tgz.1
[2025-12-17 01:23:12]  mtime=0
[2025-12-17 01:23:12]  protocol_id=None
[2025-12-17 01:23:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-17 01:23:12]  replicas=None
[2025-12-17 01:23:12]  scope=mc23_13p6TeV
[2025-12-17 01:23:12]  status=None
[2025-12-17 01:23:12]  status_code=0
[2025-12-17 01:23:12]  storage_token=
[2025-12-17 01:23:12]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6930662012/log.47886831._011385.job.log.tgz.1
[2025-12-17 01:23:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/a0/log.47886831._011385.job.log.tgz.1
[2025-12-17 01:23:12]  workdir=None
[2025-12-17 01:23:12] ]
[2025-12-17 01:23:12] 2025-12-17 00:22:24,494 | INFO     | transferring file log.47886831._011385.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6930662012/log.47886831._011385.job.log.tgz.1 to /local/data/boinc/
[2025-12-17 01:23:12] 2025-12-17 00:22:24,494 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6930662012/log.47886831._011385.job.log.tgz.1 /local/data/boinc/slots/0/log.47886831._0113
[2025-12-17 01:23:12] 2025-12-17 00:22:24,506 | INFO     | adding to output.list: log.47886831._011385.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/a0/log.47886831._011385.job.log.tg
[2025-12-17 01:23:12] 2025-12-17 00:22:24,507 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 01:23:12] 2025-12-17 00:22:24,507 | INFO     | summary of transferred files:
[2025-12-17 01:23:12] 2025-12-17 00:22:24,507 | INFO     |  -- lfn=log.47886831._011385.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 01:23:12] 2025-12-17 00:22:24,507 | INFO     | stage-out finished correctly
[2025-12-17 01:23:12] 2025-12-17 00:22:25,001 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | job 6930662012 has state=finished
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | preparing for final server update for job 6930662012 in state='finished'
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | this job has now completed (state=finished)
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | log transfer has been attempted: DONE
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | job 6930662012 has finished - writing final server update
[2025-12-17 01:23:12] 2025-12-17 00:22:25,032 | INFO     | total number of processed events: 400 (read)
[2025-12-17 01:23:12] 2025-12-17 00:22:25,033 | INFO     | executing command: lscpu
[2025-12-17 01:23:12] 2025-12-17 00:22:25,046 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 01:23:12] 2025-12-17 00:22:26,261 | INFO     | time since job start (5186s) is within the limit (174528.0s)
[2025-12-17 01:23:12] 2025-12-17 00:22:26,261 | INFO     | 5187s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 01:23:12] 2025-12-17 00:22:26,572 | INFO     | monitor loop #400: job 0:6930662012 is in state 'finished'
[2025-12-17 01:23:12] 2025-12-17 00:22:26,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 01:23:12] 2025-12-17 00:22:28,266 | INFO     | time since job start (5188s) is within the limit (174528.0s)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,075 | INFO     | monitor loop #401: job 0:6930662012 is in state 'finished'
[2025-12-17 01:23:12] 2025-12-17 00:22:29,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,309 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 01:23:12] 2025-12-17 00:22:29,311 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3776.68525
[2025-12-17 01:23:12] 2025-12-17 00:22:29,312 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6930662012/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,312 | INFO     | extracted standard info from prmon json
[2025-12-17 01:23:12] 2025-12-17 00:22:29,312 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 01:23:12] 2025-12-17 00:22:29,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 01:23:12] 2025-12-17 00:22:29,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 01:23:12] 2025-12-17 00:22:29,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | fitting pss+swap vs Time
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | sum of square deviations: 147126479.5
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | sum of deviations: -5087699326.999998
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | mean x: 1765928432.5
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | mean y: 2379017.9487179485
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | intersect: 61068972387.773834
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | chi2: 0.1413377118809653
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | current memory leak: -34.58 B/s (using 78 data points, chi2=0.14)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | could have reported an average CPU frequency of 3885 MHz (6 samples)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | ..............................
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | . Timing measurements:
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | . get job = 0 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | . initial setup = 1 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | . payload setup = 2 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | . stage-in = 0 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,313 | INFO     | . payload execution = 5164 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,314 | INFO     | . stage-out = 0 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,314 | INFO     | . log creation = 0 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,314 | INFO     | ..............................
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | 
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | job summary report
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | --------------------------------------------------
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | PanDA job id: 6930662012
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | task id: 47886831
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | errors: (none)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | pilot state: finished 
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | transexitcode: 0
[2025-12-17 01:23:12] 2025-12-17 00:22:29,343 | INFO     | exeerrorcode: 0
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | exeerrordiag: 
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | exitcode: 0
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | exitmsg: OK
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | cpuconsumptiontime: 14948 s
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | nevents: 400
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | neventsw: 0
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | pid: 201225
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | pgrp: 201225
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | corecount: 3
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | event service: False
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | sizes: {0: 2283996, 2: 2284258, 11: 2284286, 5170: 2310898, 5171: 2319902, 5172: 2319958, 5176: 2320280}
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | --------------------------------------------------
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | 
[2025-12-17 01:23:12] 2025-12-17 00:22:29,344 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | job 6930662012 has completed (purged errors)
[2025-12-17 01:23:12] 2025-12-17 00:22:29,357 | INFO     | overall cleanup function is called
[2025-12-17 01:23:12] 2025-12-17 00:22:30,363 | INFO     | --- collectZombieJob: --- 10, [201225]
[2025-12-17 01:23:12] 2025-12-17 00:22:30,363 | INFO     | zombie collector waiting for pid 201225
[2025-12-17 01:23:12] 2025-12-17 00:22:30,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 01:23:12] 2025-12-17 00:22:30,364 | INFO     | collected zombie processes
[2025-12-17 01:23:12] 2025-12-17 00:22:30,364 | INFO     | will attempt to kill all subprocesses of pid=201225
[2025-12-17 01:23:12] 2025-12-17 00:22:30,407 | INFO     | process IDs to be killed: [201225] (in reverse order)
[2025-12-17 01:23:12] 2025-12-17 00:22:30,431 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 01:23:12] 2025-12-17 00:22:30,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 01:23:12] 2025-12-17 00:22:30,433 | INFO     | did not find any defunct processes belonging to 201225
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | did not find any defunct processes belonging to 201225
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | ready for new job
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | ***************************************
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | ***************************************
[2025-12-17 01:23:12] 2025-12-17 00:22:30,434 | INFO     | 
[2025-12-17 01:23:12] 2025-12-17 00:22:30,435 | INFO     | architecture information:
[2025-12-17 01:23:12] 2025-12-17 00:22:30,435 | INFO     | executing command: cat /etc/os-release
[2025-12-17 01:23:12] 2025-12-17 00:22:30,443 | INFO     | cat /etc/os-release:
[2025-12-17 01:23:12] NAME="CentOS Linux"
[2025-12-17 01:23:12] VERSION="7 (Core)"
[2025-12-17 01:23:12] ID="centos"
[2025-12-17 01:23:12] ID_LIKE="rhel fedora"
[2025-12-17 01:23:12] VERSION_ID="7"
[2025-12-17 01:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 01:23:12] ANSI_COLOR="0;31"
[2025-12-17 01:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 01:23:12] HOME_URL="https://www.centos.org/"
[2025-12-17 01:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 01:23:12] 
[2025-12-17 01:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 01:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 01:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 01:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 01:23:12] 
[2025-12-17 01:23:12] 2025-12-17 00:22:30,443 | INFO     | ***************************************
[2025-12-17 01:23:12] 2025-12-17 00:22:30,947 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | INFO     | sufficient remaining disk space (236701351936 B)
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | INFO     | update_server=False
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | INFO     | aborting loop
[2025-12-17 01:23:12] 2025-12-17 00:22:30,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:23:12] 2025-12-17 00:22:31,015 | INFO     | all payload control threads have been joined
[2025-12-17 01:23:12] 2025-12-17 00:22:31,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 01:23:12] 2025-12-17 00:22:31,259 | INFO     | all data control threads have been joined
[2025-12-17 01:23:12] 2025-12-17 00:22:31,527 | INFO     | all job control threads have been joined
[2025-12-17 01:23:12] 2025-12-17 00:22:31,966 | INFO     | [job] retrieve thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:31,966 | INFO     | [job] job monitor thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:31,966 | INFO     | [job] queue monitor thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,021 | INFO     | [payload] control thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,249 | INFO     | [data] copytool_in thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,265 | INFO     | [data] control thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,448 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,533 | INFO     | [job] control thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,694 | INFO     | [job] validate thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,774 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,860 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,966 | INFO     | [data] copytool_out thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:32,984 | INFO     | [payload] validate_post thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:33,099 | INFO     | [payload] failed_post thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:22:35,045 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 01:23:12] 2025-12-17 00:23:01,376 | INFO     | PID=194786 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 01:23:12] 2025-12-17 00:23:01,376 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 01:23:12] 2025-12-17 00:23:01,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 01:23:12] 2025-12-17 00:23:01,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 01:23:12] 2025-12-17 00:23:05,702 | INFO     | [monitor] cgroup control has ended
[2025-12-17 01:23:12] 2025-12-17 00:23:07,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815380735808)>', '<ExcThread(monitor, started 139815026661120)>']
[2025-12-17 01:23:12] 2025-12-17 00:23:08,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 01:23:12] 2025-12-17 00:23:08,411 | INFO     | [monitor] control thread has ended
[2025-12-17 01:23:12] 2025-12-17 00:23:12,657 | INFO     | all workflow threads have been joined
[2025-12-17 01:23:12] 2025-12-17 00:23:12,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 01:23:12] 2025-12-17 00:23:12,657 | INFO     | traces error code: 0
[2025-12-17 01:23:12] 2025-12-17 00:23:12,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 01:23:12] 2025-12-17 00:23:12,706 [wrapper] ==== pilot stdout END ====
[2025-12-17 01:23:12] 2025-12-17 00:23:12,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 01:23:12] 2025-12-17 00:23:12,711 [wrapper] pilotpid: 194786
[2025-12-17 01:23:12] 2025-12-17 00:23:12,713 [wrapper] Pilot exit status: 0
[2025-12-17 01:23:12] 2025-12-17 00:23:12,720 [wrapper] pandaids: 6930662012
[2025-12-17 01:23:12] 2025-12-17 00:23:12,736 [wrapper] cleanup supervisor_pilot  213338 194787
[2025-12-17 01:23:12] 2025-12-17 00:23:12,739 [wrapper] Test setup, not cleaning
[2025-12-17 01:23:12] 2025-12-17 00:23:12,741 [wrapper] apfmon messages muted
[2025-12-17 01:23:12] 2025-12-17 00:23:12,743 [wrapper] ==== wrapper stdout END ====
[2025-12-17 01:23:12] 2025-12-17 00:23:12,745 [wrapper] ==== wrapper stderr END ====
[2025-12-17 01:23:12]  *** Error codes and diagnostics ***
[2025-12-17 01:23:12]     "exeErrorCode": 0,
[2025-12-17 01:23:12]     "exeErrorDiag": "",
[2025-12-17 01:23:12]     "pilotErrorCode": 0,
[2025-12-17 01:23:12]     "pilotErrorDiag": "",
[2025-12-17 01:23:12]  *** Listing of results directory ***
[2025-12-17 01:23:12] total 330600
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc    579449 Dec 16 05:16 pilot3.tar.gz
[2025-12-17 01:23:12] -rwx------ 1 boinc boinc     36322 Dec 16 05:17 runpilot2-wrapper.sh
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc      5112 Dec 16 05:17 queuedata.json
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc       100 Dec 16 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 01:23:12] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 23:55 run_atlas
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc       105 Dec 16 23:55 job.xml
[2025-12-17 01:23:12] -rw-r--r-- 2 boinc boinc 191544600 Dec 16 23:55 EVNT.47886829._000469.pool.root.1
[2025-12-17 01:23:12] drwxrwx--x 2 boinc boinc      4096 Dec 16 23:55 shared
[2025-12-17 01:23:12] -rw-r--r-- 2 boinc boinc    592412 Dec 16 23:55 input.tar.gz
[2025-12-17 01:23:12] -rw-r--r-- 2 boinc boinc     15847 Dec 16 23:55 start_atlas.sh
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc         0 Dec 16 23:55 boinc_setup_complete
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc      6441 Dec 16 23:55 init_data.xml
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc         0 Dec 16 23:55 boinc_lockfile
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc      2539 Dec 16 23:55 pandaJob.out
[2025-12-17 01:23:12] -rw------- 1 boinc boinc    987393 Dec 16 23:55 agis_schedconf.cvmfs.json
[2025-12-17 01:23:12] -rw------- 1 boinc boinc   1516240 Dec 16 23:55 agis_ddmendpoints.agis.ALL.json
[2025-12-17 01:23:12] drwx------ 5 boinc boinc      4096 Dec 16 23:56 pilot3
[2025-12-17 01:23:12] -rw------- 1 boinc boinc 141049719 Dec 17 01:22 HITS.47886831._011385.pool.root.1
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc       529 Dec 17 01:22 boinc_task_state.xml
[2025-12-17 01:23:12] -rw------- 1 boinc boinc      1018 Dec 17 01:22 memory_monitor_summary.json
[2025-12-17 01:23:12] -rw------- 1 boinc boinc    252185 Dec 17 01:22 log.47886831._011385.job.log.tgz.1
[2025-12-17 01:23:12] -rw------- 1 boinc boinc        95 Dec 17 01:22 pilot_heartbeat.json
[2025-12-17 01:23:12] -rw------- 1 boinc boinc      7755 Dec 17 01:22 heartbeat.json
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc      8192 Dec 17 01:22 boinc_mmap_file
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc        27 Dec 17 01:22 wrapper_checkpoint.txt
[2025-12-17 01:23:12] -rw------- 1 boinc boinc      4751 Dec 17 01:23 pilotlog.txt
[2025-12-17 01:23:12] -rw------- 1 boinc boinc    757860 Dec 17 01:23 log.47886831._011385.job.log.1
[2025-12-17 01:23:12] -rw------- 1 boinc boinc       357 Dec 17 01:23 output.list
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc       620 Dec 17 01:23 runtime_log
[2025-12-17 01:23:12] -rw------- 1 boinc boinc   1034240 Dec 17 01:23 result.tar.gz
[2025-12-17 01:23:12] -rw------- 1 boinc boinc       659 Dec 17 01:23 vaKLDmnfbp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYrUKDmILalJo.diag
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc      8902 Dec 17 01:23 runtime_log.err
[2025-12-17 01:23:12] -rw-r--r-- 1 boinc boinc     21536 Dec 17 01:23 stderr.txt
[2025-12-17 01:23:12] HITS file was successfully produced:
[2025-12-17 01:23:12] -rw------- 1 boinc boinc 141049719 Dec 17 01:22 shared/HITS.pool.root.1
[2025-12-17 01:23:12]  *** Contents of shared directory: ***
[2025-12-17 01:23:12] total 326416
[2025-12-17 01:23:12] -rw-r--r-- 2 boinc boinc 191544600 Dec 16 23:55 ATLAS.root_0
[2025-12-17 01:23:12] -rw-r--r-- 2 boinc boinc    592412 Dec 16 23:55 input.tar.gz
[2025-12-17 01:23:12] -rw-r--r-- 2 boinc boinc     15847 Dec 16 23:55 start_atlas.sh
[2025-12-17 01:23:12] -rw------- 1 boinc boinc 141049719 Dec 17 01:22 HITS.pool.root.1
[2025-12-17 01:23:12] -rw------- 1 boinc boinc   1034240 Dec 17 01:23 result.tar.gz
01:23:14 (191064): run_atlas exited; CPU time 14968.307265
01:23:14 (191064): called boinc_finish(0)

</stderr_txt>
]]>

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