Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:59:28 (163884): wrapper (7.7.26015): starting
21:59:28 (163884): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 21:59:28] Arguments: --nthreads 3
[2025-12-16 21:59:28] Threads: 3
[2025-12-16 21:59:28] Checking for CVMFS
[2025-12-16 21:59:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:59:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:59:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:59:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:59:29] 2.9.2.0 3010767 5136 89184 154087 1 57 23364759 36864001 0 130560 0 3553654 99.990 186271 16128 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 21:59:29] CVMFS is ok
[2025-12-16 21:59:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:59:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:59:29] Further information can be found at the LHC@home message board.
[2025-12-16 21:59:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:59:29] Checking for apptainer binary...
[2025-12-16 21:59:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 21:59:29] Running /usr/bin/apptainer --version
[2025-12-16 21:59:29] apptainer version 1.4.1-1.1
[2025-12-16 21:59:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:59:29] thA367a
[2025-12-16 21:59:29] apptainer works
[2025-12-16 21:59:29] Set ATHENA_PROC_NUMBER=3
[2025-12-16 21:59:29] Set ATHENA_CORE_NUMBER=3
[2025-12-16 21:59:29] Starting ATLAS job with PandaID=6929963108
[2025-12-16 21:59:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:55:49]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:55:49] 2025-12-16 22:54:49,965 | INFO     | mean y: 2360626.353982301
[2025-12-16 23:55:49] 2025-12-16 22:54:49,965 | INFO     | intersect: -6238450800.737045
[2025-12-16 23:55:49] 2025-12-16 22:54:49,965 | INFO     | chi2: 1.5785379505004744
[2025-12-16 23:55:49] 2025-12-16 22:54:49,965 | INFO     | sum of square deviations: 390582207.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | sum of deviations: 1548318470.000001
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | mean x: 1765922057.5
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | mean y: 2360538.277777778
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | intersect: -6997983279.7591095
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | chi2: 1.5796407408263977
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | current chi2=1.5796407408263977 (change=-0.06986150225743193 %)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | right removable region: 107
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | sum of square deviations: 390582207.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | sum of deviations: -11293451549.999998
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | mean x: 1765922362.5
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | mean y: 2394141.537037037
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | intersect: 51062985956.86079
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | chi2: 0.14719920846644266
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | current chi2=0.14719920846644266 (change=90.67496550084378 %)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,966 | INFO     | sum of square deviations: 338804492.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | sum of deviations: -5825723504.000001
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | mean x: 1765922515.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | mean y: 2378016.640776699
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | intersect: 30367312794.064846
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | chi2: 0.09182885883607071
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | current chi2=0.09182885883607071 (change=37.615928921924095 %)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | sum of square deviations: 291817564.5
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | sum of deviations: -829813774.5000002
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | mean x: 1765922667.5
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | mean y: 2361858.56122449
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | intersect: 5023947713.765235
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | chi2: 0.016765762328394163
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | current chi2=0.016765762328394163 (change=81.74238192557337 %)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | sum of square deviations: 249388862.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | sum of deviations: 137646194.99999994
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | mean x: 1765922820.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | mean y: 2358530.1612903224
[2025-12-16 23:55:49] 2025-12-16 22:54:49,967 | INFO     | intersect: -972314335.6889488
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | chi2: 0.0015079441097865787
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | current chi2=0.0015079441097865787 (change=91.00581243936189 %)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | sum of square deviations: 211285822.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | sum of deviations: -95361666.00000001
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | mean x: 1765922972.5
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | mean y: 2359458.8181818184
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | intersect: 799390490.4851918
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | chi2: 0.0012457275885486376
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | current chi2=0.0012457275885486376 (change=17.389007957002658 %)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | left removable region: 50
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | sum of square deviations: 57407588.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | sum of deviations: -298539672.9999999
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | mean x: 1765923552.0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | mean y: 2359843.4736842103
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | intersect: 9185784162.8699
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | chi2: 0.0007434511361270206
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | current memory leak: -5.20 B/s (using 57 data points, chi2=0.00)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | could have reported an average CPU frequency of 3897 MHz (7 samples)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,968 | INFO     | ..............................
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . Timing measurements:
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . get job = 0 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . initial setup = 1 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . payload setup = 2 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . stage-in = 0 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . payload execution = 6889 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . stage-out = 0 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | . log creation = 0 s
[2025-12-16 23:55:49] 2025-12-16 22:54:49,969 | INFO     | ..............................
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | 
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | job summary report
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | --------------------------------------------------
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | PanDA job id: 6929963108
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | task id: 47898826
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | errors: (none)
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | pilot state: finished 
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | transexitcode: 0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | exeerrorcode: 0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | exeerrordiag: 
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | exitcode: 0
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | exitmsg: OK
[2025-12-16 23:55:49] 2025-12-16 22:54:49,999 | INFO     | cpuconsumptiontime: 20050 s
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | nevents: 400
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | neventsw: 0
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | pid: 174051
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | pgrp: 174051
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | corecount: 3
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | event service: False
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | sizes: {0: 2283851, 1: 2283965, 3: 2284255, 11: 2284283, 6895: 2311659, 6896: 2320663, 6897: 2320847, 6903: 2321041}
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | --------------------------------------------------
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | 
[2025-12-16 23:55:49] 2025-12-16 22:54:50,000 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | job 6929963108 has completed (purged errors)
[2025-12-16 23:55:49] 2025-12-16 22:54:50,013 | INFO     | overall cleanup function is called
[2025-12-16 23:55:49] 2025-12-16 22:54:51,019 | INFO     | --- collectZombieJob: --- 10, [174051]
[2025-12-16 23:55:49] 2025-12-16 22:54:51,020 | INFO     | zombie collector waiting for pid 174051
[2025-12-16 23:55:49] 2025-12-16 22:54:51,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:55:49] 2025-12-16 22:54:51,020 | INFO     | collected zombie processes
[2025-12-16 23:55:49] 2025-12-16 22:54:51,020 | INFO     | will attempt to kill all subprocesses of pid=174051
[2025-12-16 23:55:49] 2025-12-16 22:54:51,063 | INFO     | process IDs to be killed: [174051] (in reverse order)
[2025-12-16 23:55:49] 2025-12-16 22:54:51,086 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:55:49] 2025-12-16 22:54:51,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:55:49] 2025-12-16 22:54:51,088 | INFO     | did not find any defunct processes belonging to 174051
[2025-12-16 23:55:49] 2025-12-16 22:54:51,089 | INFO     | did not find any defunct processes belonging to 174051
[2025-12-16 23:55:49] 2025-12-16 22:54:51,089 | INFO     | ready for new job
[2025-12-16 23:55:49] 2025-12-16 22:54:51,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:55:49] 2025-12-16 22:54:51,090 | INFO     | ***************************************
[2025-12-16 23:55:49] 2025-12-16 22:54:51,090 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:55:49] 2025-12-16 22:54:51,090 | INFO     | ***************************************
[2025-12-16 23:55:49] 2025-12-16 22:54:51,090 | INFO     | 
[2025-12-16 23:55:49] 2025-12-16 22:54:51,090 | INFO     | architecture information:
[2025-12-16 23:55:49] 2025-12-16 22:54:51,090 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:55:49] 2025-12-16 22:54:51,098 | INFO     | cat /etc/os-release:
[2025-12-16 23:55:49] NAME="CentOS Linux"
[2025-12-16 23:55:49] VERSION="7 (Core)"
[2025-12-16 23:55:49] ID="centos"
[2025-12-16 23:55:49] ID_LIKE="rhel fedora"
[2025-12-16 23:55:49] VERSION_ID="7"
[2025-12-16 23:55:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:55:49] ANSI_COLOR="0;31"
[2025-12-16 23:55:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:55:49] HOME_URL="https://www.centos.org/"
[2025-12-16 23:55:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:55:49] 
[2025-12-16 23:55:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:55:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:55:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:55:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:55:49] 
[2025-12-16 23:55:49] 2025-12-16 22:54:51,098 | INFO     | ***************************************
[2025-12-16 23:55:49] 2025-12-16 22:54:51,602 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 23:55:49] 2025-12-16 22:54:51,614 | INFO     | sufficient remaining disk space (236573425664 B)
[2025-12-16 23:55:49] 2025-12-16 22:54:51,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:55:49] 2025-12-16 22:54:51,615 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:55:49] 2025-12-16 22:54:51,615 | INFO     | update_server=False
[2025-12-16 23:55:49] 2025-12-16 22:54:51,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:55:49] 2025-12-16 22:54:51,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:55:49] 2025-12-16 22:54:51,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:55:49] 2025-12-16 22:54:51,788 | INFO     | all data control threads have been joined
[2025-12-16 23:55:49] 2025-12-16 22:54:51,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:55:49] 2025-12-16 22:54:51,923 | INFO     | aborting loop
[2025-12-16 23:55:49] 2025-12-16 22:54:52,492 | INFO     | all payload control threads have been joined
[2025-12-16 23:55:49] 2025-12-16 22:54:52,620 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:52,621 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:52,794 | INFO     | [data] control thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:52,929 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:52,957 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,023 | INFO     | all job control threads have been joined
[2025-12-16 23:55:49] 2025-12-16 22:54:53,079 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,498 | INFO     | [payload] control thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,583 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,621 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,662 | INFO     | [job] validate thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,682 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:53,712 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:54,029 | INFO     | [job] control thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:54,085 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:54:54,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:55:49] 2025-12-16 22:54:58,671 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:55:02,552 | INFO     | job.realtimelogging is not enabled
[2025-12-16 23:55:49] 2025-12-16 22:55:03,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:55:49] 2025-12-16 22:55:22,377 | INFO     | PID=167603 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 23:55:49] 2025-12-16 22:55:22,377 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:55:49] 2025-12-16 22:55:22,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:55:49] 2025-12-16 22:55:22,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:55:49] 2025-12-16 22:55:42,408 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:55:49] 2025-12-16 22:55:44,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662786504512)>', '<ExcThread(monitor, started 140662301247232)>']
[2025-12-16 23:55:49] 2025-12-16 22:55:45,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:55:49] 2025-12-16 22:55:45,485 | INFO     | [monitor] control thread has ended
[2025-12-16 23:55:49] 2025-12-16 22:55:49,536 | INFO     | all workflow threads have been joined
[2025-12-16 23:55:49] 2025-12-16 22:55:49,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:55:49] 2025-12-16 22:55:49,538 | INFO     | traces error code: 0
[2025-12-16 23:55:49] 2025-12-16 22:55:49,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:55:49] 2025-12-16 22:55:49,588 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:55:49] 2025-12-16 22:55:49,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:55:49] 2025-12-16 22:55:49,592 [wrapper] pilotpid: 167603
[2025-12-16 23:55:49] 2025-12-16 22:55:49,595 [wrapper] Pilot exit status: 0
[2025-12-16 23:55:49] 2025-12-16 22:55:49,602 [wrapper] pandaids: 6929963108
[2025-12-16 23:55:49] 2025-12-16 22:55:49,618 [wrapper] cleanup supervisor_pilot  188497 167604
[2025-12-16 23:55:49] 2025-12-16 22:55:49,620 [wrapper] Test setup, not cleaning
[2025-12-16 23:55:49] 2025-12-16 22:55:49,623 [wrapper] apfmon messages muted
[2025-12-16 23:55:49] 2025-12-16 22:55:49,625 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:55:49] 2025-12-16 22:55:49,627 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:55:49]  *** Error codes and diagnostics ***
[2025-12-16 23:55:49]     "exeErrorCode": 0,
[2025-12-16 23:55:49]     "exeErrorDiag": "",
[2025-12-16 23:55:49]     "pilotErrorCode": 0,
[2025-12-16 23:55:49]     "pilotErrorDiag": "",
[2025-12-16 23:55:49]  *** Listing of results directory ***
[2025-12-16 23:55:49] total 441404
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc    579449 Dec 15 21:57 pilot3.tar.gz
[2025-12-16 23:55:49] -rwx------ 1 boinc boinc     36322 Dec 15 21:58 runpilot2-wrapper.sh
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc      5112 Dec 15 22:00 queuedata.json
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc       100 Dec 16 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:55:49] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 21:59 run_atlas
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc       105 Dec 16 21:59 job.xml
[2025-12-16 23:55:49] -rw-r--r-- 2 boinc boinc 225351258 Dec 16 21:59 EVNT.47898824._000185.pool.root.1
[2025-12-16 23:55:49] -rw-r--r-- 2 boinc boinc    592392 Dec 16 21:59 input.tar.gz
[2025-12-16 23:55:49] -rw-r--r-- 2 boinc boinc     15847 Dec 16 21:59 start_atlas.sh
[2025-12-16 23:55:49] drwxrwx--x 2 boinc boinc      4096 Dec 16 21:59 shared
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc         0 Dec 16 21:59 boinc_setup_complete
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc      6441 Dec 16 21:59 init_data.xml
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc         0 Dec 16 21:59 boinc_lockfile
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc      2514 Dec 16 21:59 pandaJob.out
[2025-12-16 23:55:49] -rw------- 1 boinc boinc    987409 Dec 16 21:59 agis_schedconf.cvmfs.json
[2025-12-16 23:55:49] -rw------- 1 boinc boinc   1516240 Dec 16 21:59 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:55:49] drwx------ 5 boinc boinc      4096 Dec 16 21:59 pilot3
[2025-12-16 23:55:49] -rw------- 1 boinc boinc 220155046 Dec 16 23:54 HITS.47898826._003170.pool.root.1
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc       529 Dec 16 23:54 boinc_task_state.xml
[2025-12-16 23:55:49] -rw------- 1 boinc boinc      1020 Dec 16 23:54 memory_monitor_summary.json
[2025-12-16 23:55:49] -rw------- 1 boinc boinc    289862 Dec 16 23:54 log.47898826._003170.job.log.tgz.1
[2025-12-16 23:55:49] -rw------- 1 boinc boinc      7753 Dec 16 23:54 heartbeat.json
[2025-12-16 23:55:49] -rw------- 1 boinc boinc        95 Dec 16 23:55 pilot_heartbeat.json
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc      8192 Dec 16 23:55 boinc_mmap_file
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc        27 Dec 16 23:55 wrapper_checkpoint.txt
[2025-12-16 23:55:49] -rw------- 1 boinc boinc      4823 Dec 16 23:55 pilotlog.txt
[2025-12-16 23:55:49] -rw------- 1 boinc boinc    996900 Dec 16 23:55 log.47898826._003170.job.log.1
[2025-12-16 23:55:49] -rw------- 1 boinc boinc       357 Dec 16 23:55 output.list
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc       620 Dec 16 23:55 runtime_log
[2025-12-16 23:55:49] -rw------- 1 boinc boinc   1310720 Dec 16 23:55 result.tar.gz
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc      8902 Dec 16 23:55 runtime_log.err
[2025-12-16 23:55:49] -rw------- 1 boinc boinc       660 Dec 16 23:55 FM9MDmipUp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuKUKDmbs0P4n.diag
[2025-12-16 23:55:49] -rw-r--r-- 1 boinc boinc     20889 Dec 16 23:55 stderr.txt
[2025-12-16 23:55:49] HITS file was successfully produced:
[2025-12-16 23:55:49] -rw------- 1 boinc boinc 220155046 Dec 16 23:54 shared/HITS.pool.root.1
[2025-12-16 23:55:49]  *** Contents of shared directory: ***
[2025-12-16 23:55:49] total 436952
[2025-12-16 23:55:49] -rw-r--r-- 2 boinc boinc 225351258 Dec 16 21:59 ATLAS.root_0
[2025-12-16 23:55:49] -rw-r--r-- 2 boinc boinc    592392 Dec 16 21:59 input.tar.gz
[2025-12-16 23:55:49] -rw-r--r-- 2 boinc boinc     15847 Dec 16 21:59 start_atlas.sh
[2025-12-16 23:55:49] -rw------- 1 boinc boinc 220155046 Dec 16 23:54 HITS.pool.root.1
[2025-12-16 23:55:49] -rw------- 1 boinc boinc   1310720 Dec 16 23:55 result.tar.gz
23:55:50 (163884): run_atlas exited; CPU time 20078.862336
23:55:50 (163884): called boinc_finish(0)

</stderr_txt>
]]>

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