Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:06 (8378): wrapper (7.7.26015): starting
19:57:06 (8378): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 19:57:06] Arguments: --nthreads 8
[2025-12-16 19:57:06] Threads: 8
[2025-12-16 19:57:06] Checking for CVMFS
[2025-12-16 19:57:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 19:57:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 19:57:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 19:57:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 19:57:09] 2.11.2.0 6904 1245 59020 154082 1 254 13118425 25165824 4699 130560 0 1213536 99.988 232025 2313 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 19:57:09] CVMFS is ok
[2025-12-16 19:57:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 19:57:09] Checking for apptainer binary...
[2025-12-16 19:57:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 19:57:09] Running /usr/bin/apptainer --version
[2025-12-16 19:57:09] apptainer version 1.3.2-1.el7
[2025-12-16 19:57:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 19:57:28] cg-vwn474.simple-grid.lan
[2025-12-16 19:57:28] apptainer works
[2025-12-16 19:57:28] Set ATHENA_PROC_NUMBER=8
[2025-12-16 19:57:28] Set ATHENA_CORE_NUMBER=8
[2025-12-16 19:57:28] Starting ATLAS job with PandaID=6930228818
[2025-12-16 19:57:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 01:47:33]  *** The last 200 lines of the pilot log: ***
[2025-12-17 01:47:33] 2025-12-17 00:46:56,756 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6930228818/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,757 | INFO     | extracted standard info from prmon json
[2025-12-17 01:47:33] 2025-12-17 00:46:56,757 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 01:47:33] 2025-12-17 00:46:56,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 01:47:33] 2025-12-17 00:46:56,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 01:47:33] 2025-12-17 00:46:56,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 01:47:33] 2025-12-17 00:46:56,769 | INFO     | fitting pss+swap vs Time
[2025-12-17 01:47:33] 2025-12-17 00:46:56,770 | INFO     | sum of square deviations: 11347200663.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,773 | INFO     | sum of deviations: 98733892003.49997
[2025-12-17 01:47:33] 2025-12-17 00:46:56,773 | INFO     | mean x: 1765922202.5
[2025-12-17 01:47:33] 2025-12-17 00:46:56,773 | INFO     | mean y: 2475394.4006024096
[2025-12-17 01:47:33] 2025-12-17 00:46:56,773 | INFO     | intersect: -15363109229.19246
[2025-12-17 01:47:33] 2025-12-17 00:46:56,774 | INFO     | chi2: 6.31910749722982
[2025-12-17 01:47:33] 2025-12-17 00:46:56,774 | INFO     | sum of square deviations: 10842205148.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,778 | INFO     | sum of deviations: 120407800570.00002
[2025-12-17 01:47:33] 2025-12-17 00:46:56,778 | INFO     | mean x: 1765922050.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,778 | INFO     | mean y: 2481853.902140673
[2025-12-17 01:47:33] 2025-12-17 00:46:56,778 | INFO     | intersect: -19608915192.739094
[2025-12-17 01:47:33] 2025-12-17 00:46:56,778 | INFO     | chi2: 5.507236597091051
[2025-12-17 01:47:33] 2025-12-17 00:46:56,779 | INFO     | current chi2=5.507236597091051 (change=12.847872907600921 %)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,779 | INFO     | right removable region: 326
[2025-12-17 01:47:33] 2025-12-17 00:46:56,779 | INFO     | sum of square deviations: 10842205148.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,782 | INFO     | sum of deviations: -17304274491.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,783 | INFO     | mean x: 1765922355.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,783 | INFO     | mean y: 2510412.6574923545
[2025-12-17 01:47:33] 2025-12-17 00:46:56,783 | INFO     | intersect: 2820941234.025045
[2025-12-17 01:47:33] 2025-12-17 00:46:56,783 | INFO     | chi2: 1.7191699466993984
[2025-12-17 01:47:33] 2025-12-17 00:46:56,783 | INFO     | current chi2=1.7191699466993984 (change=72.7941018972529 %)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,784 | INFO     | sum of square deviations: 10352419220.5
[2025-12-17 01:47:33] 2025-12-17 00:46:56,787 | INFO     | sum of deviations: -54112704476.000015
[2025-12-17 01:47:33] 2025-12-17 00:46:56,787 | INFO     | mean x: 1765922507.5
[2025-12-17 01:47:33] 2025-12-17 00:46:56,787 | INFO     | mean y: 2521801.304347826
[2025-12-17 01:47:33] 2025-12-17 00:46:56,787 | INFO     | intersect: 9233102667.527145
[2025-12-17 01:47:33] 2025-12-17 00:46:56,788 | INFO     | chi2: 1.0214387455001739
[2025-12-17 01:47:33] 2025-12-17 00:46:56,788 | INFO     | current chi2=1.0214387455001739 (change=40.58535356197829 %)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,789 | INFO     | sum of square deviations: 9877610318.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,792 | INFO     | sum of deviations: -51607164978.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,792 | INFO     | mean x: 1765922660.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,792 | INFO     | mean y: 2520980.3028391167
[2025-12-17 01:47:33] 2025-12-17 00:46:56,792 | INFO     | intersect: 9228868155.28041
[2025-12-17 01:47:33] 2025-12-17 00:46:56,792 | INFO     | chi2: 1.0090687623174106
[2025-12-17 01:47:33] 2025-12-17 00:46:56,793 | INFO     | current chi2=1.0090687623174106 (change=1.2110352419327892 %)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,793 | INFO     | left removable region: 30
[2025-12-17 01:47:33] 2025-12-17 00:46:56,793 | INFO     | sum of square deviations: 8041713570.0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,796 | INFO     | sum of deviations: 1608169931.5000005
[2025-12-17 01:47:33] 2025-12-17 00:46:56,796 | INFO     | mean x: 1765922934.5
[2025-12-17 01:47:33] 2025-12-17 00:46:56,796 | INFO     | mean y: 2517719.3006756757
[2025-12-17 01:47:33] 2025-12-17 00:46:56,796 | INFO     | intersect: -350628925.36515075
[2025-12-17 01:47:33] 2025-12-17 00:46:56,797 | INFO     | chi2: 0.04595547061629881
[2025-12-17 01:47:33] 2025-12-17 00:46:56,797 | INFO     | current memory leak: 0.20 B/s (using 296 data points, chi2=0.05)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,797 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | ..............................
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . Timing measurements:
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . get job = 0 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . initial setup = 10 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . payload setup = 116 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . stage-in = 0 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . payload execution = 20383 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . stage-out = 2 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | . log creation = 1 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,798 | INFO     | ..............................
[2025-12-17 01:47:33] 2025-12-17 00:46:56,930 | INFO     | 
[2025-12-17 01:47:33] 2025-12-17 00:46:56,930 | INFO     | job summary report
[2025-12-17 01:47:33] 2025-12-17 00:46:56,930 | INFO     | --------------------------------------------------
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | PanDA job id: 6930228818
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | task id: 47905907
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | errors: (none)
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | pilot state: finished 
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | transexitcode: 0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | exeerrorcode: 0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | exeerrordiag: 
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | exitcode: 0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | exitmsg: OK
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | cpuconsumptiontime: 76343 s
[2025-12-17 01:47:33] 2025-12-17 00:46:56,931 | INFO     | nevents: 400
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | neventsw: 0
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | pid: 18701
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | pgrp: 18701
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | corecount: 8
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | event service: False
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | sizes: {0: 2283681, 1: 2283936, 12: 2283936, 23: 2283964, 34: 2283992, 44: 2284020, 55: 2284176, 66: 2284204, 76: 2284232, 87: 2284288, 92: 2284578, 98: 2284886, 2
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | --------------------------------------------------
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | 
[2025-12-17 01:47:33] 2025-12-17 00:46:56,932 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-17 01:47:33] 2025-12-17 00:46:57,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 01:47:33] 2025-12-17 00:46:57,410 | INFO     | job 6930228818 has completed (purged errors)
[2025-12-17 01:47:33] 2025-12-17 00:46:57,410 | INFO     | overall cleanup function is called
[2025-12-17 01:47:33] 2025-12-17 00:46:57,606 | INFO     | PID=12148 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 01:47:33] 2025-12-17 00:46:57,606 | INFO     | .. there are 9 such processes running
[2025-12-17 01:47:33] 2025-12-17 00:46:58,418 | INFO     | --- collectZombieJob: --- 10, [18701]
[2025-12-17 01:47:33] 2025-12-17 00:46:58,418 | INFO     | zombie collector waiting for pid 18701
[2025-12-17 01:47:33] 2025-12-17 00:46:58,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 01:47:33] 2025-12-17 00:46:58,419 | INFO     | collected zombie processes
[2025-12-17 01:47:33] 2025-12-17 00:46:58,419 | INFO     | will attempt to kill all subprocesses of pid=18701
[2025-12-17 01:47:33] 2025-12-17 00:46:58,535 | INFO     | process IDs to be killed: [18701] (in reverse order)
[2025-12-17 01:47:33] 2025-12-17 00:46:59,383 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 01:47:33] 2025-12-17 00:46:59,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 01:47:33] 2025-12-17 00:46:59,393 | INFO     | did not find any defunct processes belonging to 18701
[2025-12-17 01:47:33] 2025-12-17 00:46:59,396 | INFO     | did not find any defunct processes belonging to 18701
[2025-12-17 01:47:33] 2025-12-17 00:46:59,396 | INFO     | ready for new job
[2025-12-17 01:47:33] 2025-12-17 00:46:59,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 01:47:33] 2025-12-17 00:46:59,785 | INFO     | ***************************************
[2025-12-17 01:47:33] 2025-12-17 00:46:59,785 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 01:47:33] 2025-12-17 00:46:59,785 | INFO     | ***************************************
[2025-12-17 01:47:33] 2025-12-17 00:46:59,785 | INFO     | 
[2025-12-17 01:47:33] 2025-12-17 00:46:59,786 | INFO     | pilot is running in a VM
[2025-12-17 01:47:33] 2025-12-17 00:46:59,786 | INFO     | architecture information:
[2025-12-17 01:47:33] 2025-12-17 00:46:59,794 | INFO     | executing command: cat /etc/os-release
[2025-12-17 01:47:33] 2025-12-17 00:46:59,994 | INFO     | cat /etc/os-release:
[2025-12-17 01:47:33] NAME="CentOS Linux"
[2025-12-17 01:47:33] VERSION="7 (Core)"
[2025-12-17 01:47:33] ID="centos"
[2025-12-17 01:47:33] ID_LIKE="rhel fedora"
[2025-12-17 01:47:33] VERSION_ID="7"
[2025-12-17 01:47:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 01:47:33] ANSI_COLOR="0;31"
[2025-12-17 01:47:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 01:47:33] HOME_URL="https://www.centos.org/"
[2025-12-17 01:47:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 01:47:33] 
[2025-12-17 01:47:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 01:47:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 01:47:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 01:47:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 01:47:33] 
[2025-12-17 01:47:33] 2025-12-17 00:46:59,995 | INFO     | ***************************************
[2025-12-17 01:47:33] 2025-12-17 00:47:00,498 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-17 01:47:33] 2025-12-17 00:47:00,738 | INFO     | sufficient remaining disk space (495881027584 B)
[2025-12-17 01:47:33] 2025-12-17 00:47:00,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 01:47:33] 2025-12-17 00:47:00,738 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 01:47:33] 2025-12-17 00:47:00,738 | INFO     | update_server=False
[2025-12-17 01:47:33] 2025-12-17 00:47:00,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 01:47:33] 2025-12-17 00:47:00,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 01:47:33] 2025-12-17 00:47:00,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 01:47:33] 2025-12-17 00:47:00,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:47:33] 2025-12-17 00:47:00,897 | INFO     | aborting loop
[2025-12-17 01:47:33] 2025-12-17 00:47:01,115 | INFO     | all payload control threads have been joined
[2025-12-17 01:47:33] 2025-12-17 00:47:01,164 | INFO     | all data control threads have been joined
[2025-12-17 01:47:33] 2025-12-17 00:47:01,489 | INFO     | all job control threads have been joined
[2025-12-17 01:47:33] 2025-12-17 00:47:01,744 | INFO     | [job] retrieve thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:01,903 | INFO     | [job] job monitor thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:01,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:47:33] 2025-12-17 00:47:01,989 | INFO     | [payload] failed_post thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,065 | INFO     | [payload] validate_post thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,121 | INFO     | [payload] control thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,170 | INFO     | [data] control thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,450 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,495 | INFO     | [job] control thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,595 | INFO     | [job] validate thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,604 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,751 | INFO     | [data] copytool_out thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,897 | INFO     | [data] copytool_in thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:02,946 | INFO     | [job] queue monitor thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:03,067 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:04,748 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:10,949 | INFO     | job.realtimelogging is not enabled
[2025-12-17 01:47:33] 2025-12-17 00:47:11,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 01:47:33] 2025-12-17 00:47:14,460 | INFO     | [monitor] cgroup control has ended
[2025-12-17 01:47:33] 2025-12-17 00:47:16,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701471020864)>', '<ExcThread(monitor, started 139701050664704)>']
[2025-12-17 01:47:33] 2025-12-17 00:47:21,590 | INFO     | all workflow threads have been joined
[2025-12-17 01:47:33] 2025-12-17 00:47:21,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 01:47:33] 2025-12-17 00:47:21,591 | INFO     | traces error code: 0
[2025-12-17 01:47:33] 2025-12-17 00:47:21,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 01:47:33] 2025-12-17 00:47:29,778 | INFO     | PID=12148 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 01:47:33] 2025-12-17 00:47:29,779 | INFO     | .. there are 9 such processes running
[2025-12-17 01:47:33] 2025-12-17 00:47:29,780 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 01:47:33] 2025-12-17 00:47:29,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 01:47:33] 2025-12-17 00:47:29,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 01:47:33] 2025-12-17 00:47:29,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 01:47:33] 2025-12-17 00:47:29,780 | INFO     | [monitor] control thread has ended
[2025-12-17 01:47:33] 2025-12-17 00:47:30,083 [wrapper] ==== pilot stdout END ====
[2025-12-17 01:47:33] 2025-12-17 00:47:30,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 01:47:33] 2025-12-17 00:47:30,245 [wrapper] pilotpid: 12148
[2025-12-17 01:47:33] 2025-12-17 00:47:30,342 [wrapper] Pilot exit status: 0
[2025-12-17 01:47:33] 2025-12-17 00:47:30,775 [wrapper] pandaids: 6930228818
[2025-12-17 01:47:33] 2025-12-17 00:47:31,220 [wrapper] cleanup supervisor_pilot 19319 12149
[2025-12-17 01:47:33] 2025-12-17 00:47:31,277 [wrapper] Test setup, not cleaning
[2025-12-17 01:47:33] 2025-12-17 00:47:31,314 [wrapper] apfmon messages muted
[2025-12-17 01:47:33] 2025-12-17 00:47:31,369 [wrapper] ==== wrapper stdout END ====
[2025-12-17 01:47:33] 2025-12-17 00:47:31,460 [wrapper] ==== wrapper stderr END ====
[2025-12-17 01:47:33]  *** Error codes and diagnostics ***
[2025-12-17 01:47:33]     "exeErrorCode": 0,
[2025-12-17 01:47:33]     "exeErrorDiag": "",
[2025-12-17 01:47:33]     "pilotErrorCode": 0,
[2025-12-17 01:47:33]     "pilotErrorDiag": "",
[2025-12-17 01:47:33]  *** Listing of results directory ***
[2025-12-17 01:47:33] total 412768
[2025-12-17 01:47:33] -rwx------. 1 boinc boinc     36322 Dec 16 03:09 runpilot2-wrapper.sh
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc    579449 Dec 16 03:12 pilot3.tar.gz
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc      5112 Dec 16 03:12 queuedata.json
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc       100 Dec 16 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 01:47:33] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 19:57 run_atlas
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc       105 Dec 16 19:57 job.xml
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc      6393 Dec 16 19:57 init_data.xml
[2025-12-17 01:47:33] -rw-r--r--. 2 boinc boinc 203077178 Dec 16 19:57 EVNT.47905905._000035.pool.root.1
[2025-12-17 01:47:33] -rw-r--r--. 2 boinc boinc     15847 Dec 16 19:57 start_atlas.sh
[2025-12-17 01:47:33] drwxrwx--x. 2 boinc boinc        68 Dec 16 19:57 shared
[2025-12-17 01:47:33] -rw-r--r--. 2 boinc boinc    592389 Dec 16 19:57 input.tar.gz
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc         0 Dec 16 19:57 boinc_lockfile
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc      2475 Dec 16 19:57 pandaJob.out
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc    987409 Dec 16 20:00 agis_schedconf.cvmfs.json
[2025-12-17 01:47:33] drwx------. 5 boinc boinc      4096 Dec 16 20:00 pilot3
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc 209118716 Dec 17 01:44 HITS.47905907._000830.pool.root.1
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc       531 Dec 17 01:44 boinc_task_state.xml
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc      1018 Dec 17 01:45 memory_monitor_summary.json
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc   1516240 Dec 17 01:45 agis_ddmendpoints.agis.ALL.json
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc    529930 Dec 17 01:45 log.47905907._000830.job.log.tgz.1
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc      7774 Dec 17 01:46 heartbeat.json
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc      8192 Dec 17 01:47 boinc_mmap_file
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc        28 Dec 17 01:47 wrapper_checkpoint.txt
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc        95 Dec 17 01:47 pilot_heartbeat.json
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc       820 Dec 17 01:47 pilotlog.txt
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc   2762973 Dec 17 01:47 log.47905907._000830.job.log.1
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc       357 Dec 17 01:47 output.list
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc       620 Dec 17 01:47 runtime_log
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc   3307520 Dec 17 01:47 result.tar.gz
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc      8817 Dec 17 01:47 runtime_log.err
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc       658 Dec 17 01:47 pl5NDmegZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMGZKDmrDLJWm.diag
[2025-12-17 01:47:33] -rw-r--r--. 1 boinc boinc     20846 Dec 17 01:47 stderr.txt
[2025-12-17 01:47:33] HITS file was successfully produced:
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc 209118716 Dec 17 01:44 shared/HITS.pool.root.1
[2025-12-17 01:47:33]  *** Contents of shared directory: ***
[2025-12-17 01:47:33] total 406368
[2025-12-17 01:47:33] -rw-r--r--. 2 boinc boinc 203077178 Dec 16 19:57 ATLAS.root_0
[2025-12-17 01:47:33] -rw-r--r--. 2 boinc boinc     15847 Dec 16 19:57 start_atlas.sh
[2025-12-17 01:47:33] -rw-r--r--. 2 boinc boinc    592389 Dec 16 19:57 input.tar.gz
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc 209118716 Dec 17 01:44 HITS.pool.root.1
[2025-12-17 01:47:33] -rw-------. 1 boinc boinc   3307520 Dec 17 01:47 result.tar.gz
01:47:35 (8378): run_atlas exited; CPU time 76621.360446
01:47:35 (8378): called boinc_finish(0)

</stderr_txt>
]]>

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