Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:55:49 (12709): wrapper (7.7.26015): starting
07:55:49 (12709): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 07:55:49] Arguments: --nthreads 12
[2025-12-16 07:55:49] Threads: 12
[2025-12-16 07:55:49] Checking for CVMFS
[2025-12-16 07:55:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 07:55:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 07:55:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 07:55:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 07:55:49] 2.11.2.0 2984 316463 92792 154071 3 57 17439659 20275200 1 130560 1 141294152 99.974 17755321 14932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 07:55:49] CVMFS is ok
[2025-12-16 07:55:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 07:55:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 07:55:49] Further information can be found at the LHC@home message board.
[2025-12-16 07:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 07:55:49] Checking for apptainer binary...
[2025-12-16 07:55:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 07:55:49] Running /usr/bin/apptainer --version
[2025-12-16 07:55:49] apptainer version 1.3.2-1.el7
[2025-12-16 07:55:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 07:55:50] c-205-26.aglt2.org
[2025-12-16 07:55:50] apptainer works
[2025-12-16 07:55:50] Set ATHENA_PROC_NUMBER=12
[2025-12-16 07:55:50] Set ATHENA_CORE_NUMBER=12
[2025-12-16 07:55:50] Starting ATLAS job with PandaID=6930660350
[2025-12-16 07:55:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 09:12:18]  *** The last 200 lines of the pilot log: ***
[2025-12-16 09:12:18] 2025-12-16 14:11:24,693 | INFO     | summary of transferred files:
[2025-12-16 09:12:18] 2025-12-16 14:11:24,693 | INFO     |  -- lfn=log.47886831._011027.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 09:12:18] 2025-12-16 14:11:24,694 | INFO     | stage-out finished correctly
[2025-12-16 09:12:18] 2025-12-16 14:11:25,392 | INFO     | time since job start (4520s) is within the limit (174528.0s)
[2025-12-16 09:12:18] 2025-12-16 14:11:25,979 | WARNING  | process 22864 can no longer be monitored (due to stat problems) - aborting
[2025-12-16 09:12:18] 2025-12-16 14:11:25,979 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660350/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:12:18] 2025-12-16 14:11:25,980 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660350/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:12:18] 2025-12-16 14:11:25,980 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-16 09:12:18] 2025-12-16 14:11:25,980 | WARNING  | maxPSS not found in memory monitor output
[2025-12-16 09:12:18] 2025-12-16 14:11:25,981 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4678290 B
[2025-12-16 09:12:18] 2025-12-16 14:11:25,981 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15841 B
[2025-12-16 09:12:18] 2025-12-16 14:11:25,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 09:12:18] 2025-12-16 14:11:25,999 | INFO     | sufficient remaining disk space (29449256960 B)
[2025-12-16 09:12:18] 2025-12-16 14:11:26,000 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-16 09:12:18] 2025-12-16 14:11:26,001 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6930660350: 4976436 B (within 2768240640 B limit)
[2025-12-16 09:12:18] 2025-12-16 14:11:26,001 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6930660350/HITS.47886831._011027.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-16 09:12:18] 2025-12-16 14:11:26,001 | INFO     | total size of present files: 0 B (workdir size: 4976436 B)
[2025-12-16 09:12:18] 2025-12-16 14:11:26,002 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6930660350/HITS.47886831._011027.pool.root.1 since it does not exist
[2025-12-16 09:12:18] 2025-12-16 14:11:26,096 | INFO     | number of running child processes to parent process 22864: 1
[2025-12-16 09:12:18] 2025-12-16 14:11:26,096 | INFO     | maximum number of monitored processes: 6
[2025-12-16 09:12:18] 2025-12-16 14:11:26,879 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 09:12:18] 2025-12-16 14:11:27,398 | INFO     | time since job start (4522s) is within the limit (174528.0s)
[2025-12-16 09:12:18] 2025-12-16 14:11:28,599 | INFO     | monitor loop #336: job 0:6930660350 is in state 'finished'
[2025-12-16 09:12:18] 2025-12-16 14:11:28,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 09:12:18] 2025-12-16 14:11:28,785 | INFO     | job 6930660350 has state=finished
[2025-12-16 09:12:18] 2025-12-16 14:11:28,785 | INFO     | preparing for final server update for job 6930660350 in state='finished'
[2025-12-16 09:12:18] 2025-12-16 14:11:28,786 | INFO     | this job has now completed (state=finished)
[2025-12-16 09:12:18] 2025-12-16 14:11:28,786 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 09:12:18] 2025-12-16 14:11:28,786 | INFO     | log transfer has been attempted: DONE
[2025-12-16 09:12:18] 2025-12-16 14:11:28,786 | INFO     | job 6930660350 has finished - writing final server update
[2025-12-16 09:12:18] 2025-12-16 14:11:28,787 | INFO     | total number of processed events: 400 (read)
[2025-12-16 09:12:18] 2025-12-16 14:11:28,788 | INFO     | executing command: lscpu
[2025-12-16 09:12:18] 2025-12-16 14:11:28,815 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 09:12:18] 2025-12-16 14:11:29,403 | INFO     | time since job start (4524s) is within the limit (174528.0s)
[2025-12-16 09:12:18] 2025-12-16 14:11:31,102 | INFO     | monitor loop #337: job 0:6930660350 is in state 'finished'
[2025-12-16 09:12:18] 2025-12-16 14:11:31,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 09:12:18] 2025-12-16 14:11:31,409 | INFO     | time since job start (4526s) is within the limit (174528.0s)
[2025-12-16 09:12:18] 2025-12-16 14:11:32,530 | INFO     | PID=16467 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 09:12:18] 2025-12-16 14:11:33,530 | INFO     | time since job start (4528s) is within the limit (174528.0s)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,553 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 09:12:18] 2025-12-16 14:11:33,556 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-12-16 09:12:18] 2025-12-16 14:11:33,558 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930660350/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,558 | INFO     | extracted standard info from prmon json
[2025-12-16 09:12:18] 2025-12-16 14:11:33,558 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 09:12:18] 2025-12-16 14:11:33,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 09:12:18] 2025-12-16 14:11:33,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 09:12:18] 2025-12-16 14:11:33,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 09:12:18] 2025-12-16 14:11:33,560 | INFO     | fitting pss+swap vs Time
[2025-12-16 09:12:18] 2025-12-16 14:11:33,561 | INFO     | sum of square deviations: 93240818.0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,561 | INFO     | sum of deviations: -4538755386.0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,561 | INFO     | mean x: 1765892112.0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,561 | INFO     | mean y: 2695379.223880597
[2025-12-16 09:12:18] 2025-12-16 14:11:33,561 | INFO     | intersect: 85962390997.02632
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | chi2: 0.07901898758583538
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | current memory leak: -48.68 B/s (using 67 data points, chi2=0.08)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | could have reported an average CPU frequency of 2061 MHz (6 samples)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | ..............................
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | . Timing measurements:
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | . get job = 0 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,562 | INFO     | . initial setup = 2 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,563 | INFO     | . payload setup = 7 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,563 | INFO     | . stage-in = 0 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,563 | INFO     | . payload execution = 4491 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,563 | INFO     | . stage-out = 0 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,563 | INFO     | . log creation = 0 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,563 | INFO     | ..............................
[2025-12-16 09:12:18] 2025-12-16 14:11:33,674 | INFO     | 
[2025-12-16 09:12:18] 2025-12-16 14:11:33,674 | INFO     | job summary report
[2025-12-16 09:12:18] 2025-12-16 14:11:33,674 | INFO     | --------------------------------------------------
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | PanDA job id: 6930660350
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | task id: 47886831
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | errors: (none)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | pilot state: finished 
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | transexitcode: 0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | exeerrorcode: 0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | exeerrordiag: 
[2025-12-16 09:12:18] 2025-12-16 14:11:33,675 | INFO     | exitcode: 0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | exitmsg: OK
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | cpuconsumptiontime: 48487 s
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | nevents: 400
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | neventsw: 0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | pid: 22864
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | pgrp: 22864
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | corecount: 12
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | event service: False
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | sizes: {0: 2283822, 1: 2284021, 5: 2284283, 11: 2284339, 4501: 2310408, 4503: 2319406, 4505: 2319618, 4512: 2319812}
[2025-12-16 09:12:18] 2025-12-16 14:11:33,676 | INFO     | --------------------------------------------------
[2025-12-16 09:12:18] 2025-12-16 14:11:33,677 | INFO     | 
[2025-12-16 09:12:18] 2025-12-16 14:11:33,677 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 09:12:18] 2025-12-16 14:11:33,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,701 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,701 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 09:12:18] 2025-12-16 14:11:33,704 | INFO     | job 6930660350 has completed (purged errors)
[2025-12-16 09:12:18] 2025-12-16 14:11:33,705 | INFO     | overall cleanup function is called
[2025-12-16 09:12:18] 2025-12-16 14:11:34,712 | INFO     | --- collectZombieJob: --- 10, [22864]
[2025-12-16 09:12:18] 2025-12-16 14:11:34,713 | INFO     | zombie collector waiting for pid 22864
[2025-12-16 09:12:18] 2025-12-16 14:11:34,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 09:12:18] 2025-12-16 14:11:34,713 | INFO     | collected zombie processes
[2025-12-16 09:12:18] 2025-12-16 14:11:34,713 | INFO     | will attempt to kill all subprocesses of pid=22864
[2025-12-16 09:12:18] 2025-12-16 14:11:34,808 | INFO     | process IDs to be killed: [22864] (in reverse order)
[2025-12-16 09:12:18] 2025-12-16 14:11:34,860 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 09:12:18] 2025-12-16 14:11:34,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 09:12:18] 2025-12-16 14:11:34,864 | INFO     | did not find any defunct processes belonging to 22864
[2025-12-16 09:12:18] 2025-12-16 14:11:34,867 | INFO     | did not find any defunct processes belonging to 22864
[2025-12-16 09:12:18] 2025-12-16 14:11:34,867 | INFO     | ready for new job
[2025-12-16 09:12:18] 2025-12-16 14:11:34,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 09:12:18] 2025-12-16 14:11:34,868 | INFO     | ***************************************
[2025-12-16 09:12:18] 2025-12-16 14:11:34,868 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 09:12:18] 2025-12-16 14:11:34,868 | INFO     | ***************************************
[2025-12-16 09:12:18] 2025-12-16 14:11:34,868 | INFO     | 
[2025-12-16 09:12:18] 2025-12-16 14:11:34,869 | INFO     | architecture information:
[2025-12-16 09:12:18] 2025-12-16 14:11:34,870 | INFO     | executing command: cat /etc/os-release
[2025-12-16 09:12:18] 2025-12-16 14:11:34,886 | INFO     | cat /etc/os-release:
[2025-12-16 09:12:18] NAME="CentOS Linux"
[2025-12-16 09:12:18] VERSION="7 (Core)"
[2025-12-16 09:12:18] ID="centos"
[2025-12-16 09:12:18] ID_LIKE="rhel fedora"
[2025-12-16 09:12:18] VERSION_ID="7"
[2025-12-16 09:12:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 09:12:18] ANSI_COLOR="0;31"
[2025-12-16 09:12:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 09:12:18] HOME_URL="https://www.centos.org/"
[2025-12-16 09:12:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 09:12:18] 
[2025-12-16 09:12:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 09:12:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 09:12:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 09:12:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 09:12:18] 
[2025-12-16 09:12:18] 2025-12-16 14:11:34,886 | INFO     | ***************************************
[2025-12-16 09:12:18] 2025-12-16 14:11:35,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 09:12:18] 2025-12-16 14:11:35,404 | INFO     | sufficient remaining disk space (29454499840 B)
[2025-12-16 09:12:18] 2025-12-16 14:11:35,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 09:12:18] 2025-12-16 14:11:35,404 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 09:12:18] 2025-12-16 14:11:35,404 | INFO     | update_server=False
[2025-12-16 09:12:18] 2025-12-16 14:11:35,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 09:12:18] 2025-12-16 14:11:35,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:12:18] 2025-12-16 14:11:35,405 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-16 09:12:18] 2025-12-16 14:11:35,405 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 09:12:18] 2025-12-16 14:11:35,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 09:12:18] 2025-12-16 14:11:35,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 09:12:18] 2025-12-16 14:11:35,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:12:18] 2025-12-16 14:11:35,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 09:12:18] 2025-12-16 14:11:35,407 | INFO     | aborting loop
[2025-12-16 09:12:18] 2025-12-16 14:11:35,626 | INFO     | all data control threads have been joined
[2025-12-16 09:12:18] 2025-12-16 14:11:36,029 | INFO     | all job control threads have been joined
[2025-12-16 09:12:18] 2025-12-16 14:11:36,102 | INFO     | all payload control threads have been joined
[2025-12-16 09:12:18] 2025-12-16 14:11:36,410 | INFO     | [job] retrieve thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:36,411 | INFO     | [job] queue monitor thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:36,412 | INFO     | [job] job monitor thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:36,633 | INFO     | [data] control thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:36,894 | INFO     | [data] copytool_in thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,035 | INFO     | [job] control thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,108 | INFO     | [payload] control thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,154 | INFO     | [payload] validate_post thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,412 | INFO     | [data] copytool_out thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 09:12:18] 2025-12-16 14:11:37,581 | INFO     | [payload] failed_post thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,693 | INFO     | [job] validate thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,693 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,787 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:37,856 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:11:41,475 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 09:12:18] 2025-12-16 14:12:12,564 | INFO     | [monitor] cgroup control has ended
[2025-12-16 09:12:18] 2025-12-16 14:12:13,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274055169856)>', '<ExcThread(monitor, started 140273447311104)>']
[2025-12-16 09:12:18] 2025-12-16 14:12:13,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 09:12:18] 2025-12-16 14:12:13,590 | INFO     | [monitor] control thread has ended
[2025-12-16 09:12:18] 2025-12-16 14:12:18,018 | INFO     | all workflow threads have been joined
[2025-12-16 09:12:18] 2025-12-16 14:12:18,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 09:12:18] 2025-12-16 14:12:18,026 | INFO     | traces error code: 0
[2025-12-16 09:12:18] 2025-12-16 14:12:18,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 09:12:18] 2025-12-16 14:12:18,125 [wrapper] ==== pilot stdout END ====
[2025-12-16 09:12:18] 2025-12-16 14:12:18,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 09:12:18] 2025-12-16 14:12:18,132 [wrapper] pilotpid: 16467
[2025-12-16 09:12:18] 2025-12-16 14:12:18,136 [wrapper] Pilot exit status: 0
[2025-12-16 09:12:18] 2025-12-16 14:12:18,152 [wrapper] pandaids: 6930660350
[2025-12-16 09:12:18] 2025-12-16 14:12:18,197 [wrapper] cleanup supervisor_pilot 22736 16468
[2025-12-16 09:12:18] 2025-12-16 14:12:18,201 [wrapper] Test setup, not cleaning
[2025-12-16 09:12:18] 2025-12-16 14:12:18,205 [wrapper] apfmon messages muted
[2025-12-16 09:12:18] 2025-12-16 14:12:18,209 [wrapper] ==== wrapper stdout END ====
[2025-12-16 09:12:18] 2025-12-16 14:12:18,213 [wrapper] ==== wrapper stderr END ====
[2025-12-16 09:12:18]  *** Error codes and diagnostics ***
[2025-12-16 09:12:18]     "exeErrorCode": 0,
[2025-12-16 09:12:18]     "exeErrorDiag": "",
[2025-12-16 09:12:18]     "pilotErrorCode": 0,
[2025-12-16 09:12:18]     "pilotErrorDiag": "",
[2025-12-16 09:12:18]  *** Listing of results directory ***
[2025-12-16 09:12:18] total 336976
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 21:06 pilot3.tar.gz
[2025-12-16 09:12:18] -rwx------ 1 boincer umatlas     36322 Dec 15 21:07 runpilot2-wrapper.sh
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 21:09 queuedata.json
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas       100 Dec 16 07:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 09:12:18] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 07:55 run_atlas
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas       105 Dec 16 07:55 job.xml
[2025-12-16 09:12:18] -rw-r--r-- 2 boincer umatlas 192849737 Dec 16 07:55 EVNT.47886829._000454.pool.root.1
[2025-12-16 09:12:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 07:55 start_atlas.sh
[2025-12-16 09:12:18] drwxrwx--x 2 boincer umatlas      4096 Dec 16 07:55 shared
[2025-12-16 09:12:18] -rw-r--r-- 2 boincer umatlas    592413 Dec 16 07:55 input.tar.gz
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas         0 Dec 16 07:55 boinc_lockfile
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas      2539 Dec 16 07:55 pandaJob.out
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas        57 Dec 16 07:55 setup.sh.local
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas    990993 Dec 16 07:56 agis_schedconf.cvmfs.json
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas   1516240 Dec 16 07:56 agis_ddmendpoints.agis.ALL.json
[2025-12-16 09:12:18] drwx------ 5 boincer umatlas      4096 Dec 16 07:56 pilot3
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 09:10 init_data.xml
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas 146182385 Dec 16 09:10 HITS.47886831._011027.pool.root.1
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas        95 Dec 16 09:11 pilot_heartbeat.json
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas       529 Dec 16 09:11 boinc_task_state.xml
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas      1045 Dec 16 09:11 memory_monitor_summary.json
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas    397596 Dec 16 09:11 log.47886831._011027.job.log.tgz.1
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas      7851 Dec 16 09:11 heartbeat.json
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 09:12 boinc_mmap_file
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas        27 Dec 16 09:12 wrapper_checkpoint.txt
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas      4552 Dec 16 09:12 pilotlog.txt
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas    656747 Dec 16 09:12 log.47886831._011027.job.log.1
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas       357 Dec 16 09:12 output.list
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas       620 Dec 16 09:12 runtime_log
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas   1075200 Dec 16 09:12 result.tar.gz
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas       659 Dec 16 09:12 Y1xKDmUeZp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUjUKDmlHgn7n.diag
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 09:12 runtime_log.err
[2025-12-16 09:12:18] -rw-r--r-- 1 boincer umatlas     22472 Dec 16 09:12 stderr.txt
[2025-12-16 09:12:18] HITS file was successfully produced:
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas 146182385 Dec 16 09:10 shared/HITS.pool.root.1
[2025-12-16 09:12:18]  *** Contents of shared directory: ***
[2025-12-16 09:12:18] total 332744
[2025-12-16 09:12:18] -rw-r--r-- 2 boincer umatlas 192849737 Dec 16 07:55 ATLAS.root_0
[2025-12-16 09:12:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 07:55 start_atlas.sh
[2025-12-16 09:12:18] -rw-r--r-- 2 boincer umatlas    592413 Dec 16 07:55 input.tar.gz
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas 146182385 Dec 16 09:10 HITS.pool.root.1
[2025-12-16 09:12:18] -rw------- 1 boincer umatlas   1075200 Dec 16 09:12 result.tar.gz
09:12:20 (12709): run_atlas exited; CPU time 48468.971161
09:12:20 (12709): called boinc_finish(0)

</stderr_txt>
]]>

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