Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:21 (2277131): wrapper (7.7.26015): starting
02:04:21 (2277131): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 02:04:21] Arguments: --nthreads 4
[2025-12-17 02:04:21] Threads: 4
[2025-12-17 02:04:21] Checking for CVMFS
[2025-12-17 02:04:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 02:04:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 02:04:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 02:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 02:04:21] 2.9.2.0 382260 5179 96004 154093 4 57 25337069 36864000 0 130560 0 4068816 99.991 190759 15695 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 02:04:21] CVMFS is ok
[2025-12-17 02:04:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 02:04:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 02:04:21] Further information can be found at the LHC@home message board.
[2025-12-17 02:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 02:04:21] Checking for apptainer binary...
[2025-12-17 02:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 02:04:21] Running /usr/bin/apptainer --version
[2025-12-17 02:04:21] apptainer version 1.4.1-1.1
[2025-12-17 02:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 02:04:21] atlasA237
[2025-12-17 02:04:21] apptainer works
[2025-12-17 02:04:21] Set ATHENA_PROC_NUMBER=4
[2025-12-17 02:04:21] Set ATHENA_CORE_NUMBER=4
[2025-12-17 02:04:21] Starting ATLAS job with PandaID=6930228307
[2025-12-17 02:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 03:42:41]  *** The last 200 lines of the pilot log: ***
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | INFO     | sufficient remaining disk space (334222065664 B)
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | INFO     | update_server=False
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:42:41] 2025-12-17 02:41:44,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 03:42:41] 2025-12-17 02:41:44,489 | INFO     | all payload control threads have been joined
[2025-12-17 03:42:41] 2025-12-17 02:41:44,713 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 03:42:41] 2025-12-17 02:41:44,714 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 03:42:41] 2025-12-17 02:41:44,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:42:41] 2025-12-17 02:41:44,714 | INFO     | will abort loop
[2025-12-17 03:42:41] 2025-12-17 02:41:45,413 | INFO     | [job] retrieve thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:45,414 | INFO     | [job] queue monitor thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:45,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 03:42:41] 2025-12-17 02:41:45,470 | INFO     | [payload] failed_post thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:45,482 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:45,494 | INFO     | all data control threads have been joined
[2025-12-17 03:42:41] 2025-12-17 02:41:45,494 | INFO     | [payload] control thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:45,596 | INFO     | all job control threads have been joined
[2025-12-17 03:42:41] 2025-12-17 02:41:45,708 | INFO     | [data] copytool_in thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:45,719 | INFO     | [job] job monitor thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:46,037 | INFO     | [payload] validate_post thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:46,500 | INFO     | [data] control thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:46,602 | INFO     | [job] control thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:46,672 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:46,831 | INFO     | [job] validate thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:46,911 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:47,424 | INFO     | [data] copytool_out thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:48,416 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:41:55,105 | INFO     | job.realtimelogging is not enabled
[2025-12-17 03:42:41] 2025-12-17 02:41:56,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 03:42:41] 2025-12-17 02:42:14,615 | INFO     | PID=2280940 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 03:42:41] 2025-12-17 02:42:14,615 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 03:42:41] 2025-12-17 02:42:14,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 03:42:41] 2025-12-17 02:42:14,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 03:42:41] 2025-12-17 02:42:35,112 | INFO     | [monitor] cgroup control has ended
[2025-12-17 03:42:41] 2025-12-17 02:42:36,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676860913472)>', '<ExcThread(monitor, started 139676060989184)>']
[2025-12-17 03:42:41] 2025-12-17 02:42:36,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 03:42:41] 2025-12-17 02:42:36,728 | INFO     | [monitor] control thread has ended
[2025-12-17 03:42:41] 2025-12-17 02:42:41,160 | INFO     | all workflow threads have been joined
[2025-12-17 03:42:41] 2025-12-17 02:42:41,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 03:42:41] 2025-12-17 02:42:41,160 | INFO     | traces error code: 0
[2025-12-17 03:42:41] 2025-12-17 02:42:41,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 03:42:41] 2025-12-17 02:42:41,231 [wrapper] ==== pilot stdout END ====
[2025-12-17 03:42:41] 2025-12-17 02:42:41,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 03:42:41] 2025-12-17 02:42:41,238 [wrapper] pilotpid: 2280940
[2025-12-17 03:42:41] 2025-12-17 02:42:41,242 [wrapper] Pilot exit status: 0
[2025-12-17 03:42:41] 2025-12-17 02:42:41,253 [wrapper] pandaids: 6930228307
[2025-12-17 03:42:41] 2025-12-17 02:42:41,279 [wrapper] cleanup supervisor_pilot 2305403 2280941
[2025-12-17 03:42:41] 2025-12-17 02:42:41,283 [wrapper] Test setup, not cleaning
[2025-12-17 03:42:41] 2025-12-17 02:42:41,286 [wrapper] apfmon messages muted
[2025-12-17 03:42:41] 2025-12-17 02:42:41,290 [wrapper] ==== wrapper stdout END ====
[2025-12-17 03:42:41] 2025-12-17 02:42:41,293 [wrapper] ==== wrapper stderr END ====
[2025-12-17 03:42:41]  *** Error codes and diagnostics ***
[2025-12-17 03:42:41]     "exeErrorCode": 0,
[2025-12-17 03:42:41]     "exeErrorDiag": "",
[2025-12-17 03:42:41]     "pilotErrorCode": 0,
[2025-12-17 03:42:41]     "pilotErrorDiag": "",
[2025-12-17 03:42:41]  *** Listing of results directory ***
[2025-12-17 03:42:41] total 441308
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc    579449 Dec 16 03:06 pilot3.tar.gz
[2025-12-17 03:42:41] -rwx------ 1 boinc boinc     36322 Dec 16 03:07 runpilot2-wrapper.sh
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc      5112 Dec 16 03:07 queuedata.json
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc       100 Dec 17 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 03:42:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 02:04 run_atlas
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc       105 Dec 17 02:04 job.xml
[2025-12-17 03:42:41] -rw-r--r-- 2 boinc boinc 228197597 Dec 17 02:04 EVNT.47898824._000208.pool.root.1
[2025-12-17 03:42:41] -rw-r--r-- 2 boinc boinc    592393 Dec 17 02:04 input.tar.gz
[2025-12-17 03:42:41] -rw-r--r-- 2 boinc boinc     15847 Dec 17 02:04 start_atlas.sh
[2025-12-17 03:42:41] drwxrwx--x 2 boinc boinc      4096 Dec 17 02:04 shared
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc         0 Dec 17 02:04 boinc_setup_complete
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc      6372 Dec 17 02:04 init_data.xml
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc         0 Dec 17 02:04 boinc_lockfile
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc      2514 Dec 17 02:04 pandaJob.out
[2025-12-17 03:42:41] -rw------- 1 boinc boinc    987401 Dec 17 02:04 agis_schedconf.cvmfs.json
[2025-12-17 03:42:41] -rw------- 1 boinc boinc   1516240 Dec 17 02:04 agis_ddmendpoints.agis.ALL.json
[2025-12-17 03:42:41] drwx------ 5 boinc boinc      4096 Dec 17 02:04 pilot3
[2025-12-17 03:42:41] -rw------- 1 boinc boinc 217512839 Dec 17 03:41 HITS.47898826._003654.pool.root.1
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc       529 Dec 17 03:41 boinc_task_state.xml
[2025-12-17 03:42:41] -rw------- 1 boinc boinc      1021 Dec 17 03:41 memory_monitor_summary.json
[2025-12-17 03:42:41] -rw------- 1 boinc boinc    297234 Dec 17 03:41 log.47898826._003654.job.log.tgz.1
[2025-12-17 03:42:41] -rw------- 1 boinc boinc      7761 Dec 17 03:41 heartbeat.json
[2025-12-17 03:42:41] -rw------- 1 boinc boinc        95 Dec 17 03:42 pilot_heartbeat.json
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc      8192 Dec 17 03:42 boinc_mmap_file
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc        27 Dec 17 03:42 wrapper_checkpoint.txt
[2025-12-17 03:42:41] -rw------- 1 boinc boinc      5010 Dec 17 03:42 pilotlog.txt
[2025-12-17 03:42:41] -rw------- 1 boinc boinc    846673 Dec 17 03:42 log.47898826._003654.job.log.1
[2025-12-17 03:42:41] -rw------- 1 boinc boinc       357 Dec 17 03:42 output.list
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc       620 Dec 17 03:42 runtime_log
[2025-12-17 03:42:41] -rw------- 1 boinc boinc   1167360 Dec 17 03:42 result.tar.gz
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc      8912 Dec 17 03:42 runtime_log.err
[2025-12-17 03:42:41] -rw------- 1 boinc boinc       662 Dec 17 03:42 Pa2MDm3dZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmA9YKDmzGa9fm.diag
[2025-12-17 03:42:41] -rw-r--r-- 1 boinc boinc      8079 Dec 17 03:42 stderr.txt
[2025-12-17 03:42:41] HITS file was successfully produced:
[2025-12-17 03:42:41] -rw------- 1 boinc boinc 217512839 Dec 17 03:41 shared/HITS.pool.root.1
[2025-12-17 03:42:41]  *** Contents of shared directory: ***
[2025-12-17 03:42:41] total 437012
[2025-12-17 03:42:41] -rw-r--r-- 2 boinc boinc 228197597 Dec 17 02:04 ATLAS.root_0
[2025-12-17 03:42:41] -rw-r--r-- 2 boinc boinc    592393 Dec 17 02:04 input.tar.gz
[2025-12-17 03:42:41] -rw-r--r-- 2 boinc boinc     15847 Dec 17 02:04 start_atlas.sh
[2025-12-17 03:42:41] -rw------- 1 boinc boinc 217512839 Dec 17 03:41 HITS.pool.root.1
[2025-12-17 03:42:41] -rw------- 1 boinc boinc   1167360 Dec 17 03:42 result.tar.gz
03:42:43 (2277131): run_atlas exited; CPU time 22298.781810
03:42:43 (2277131): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN