Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:42:45 (2310640): wrapper (7.7.26015): starting
03:42:45 (2310640): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 03:42:45] Arguments: --nthreads 4
[2025-12-17 03:42:45] Threads: 4
[2025-12-17 03:42:45] Checking for CVMFS
[2025-12-17 03:42:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:42:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:42:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:42:45] 2.9.2.0 382260 5278 96272 154095 1 57 25344163 36864001 0 130560 0 4140147 99.991 193477 15743 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 03:42:45] CVMFS is ok
[2025-12-17 03:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 03:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 03:42:45] Further information can be found at the LHC@home message board.
[2025-12-17 03:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:42:45] Checking for apptainer binary...
[2025-12-17 03:42:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:42:45] Running /usr/bin/apptainer --version
[2025-12-17 03:42:45] apptainer version 1.4.1-1.1
[2025-12-17 03:42:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:42:45] atlasA237
[2025-12-17 03:42:45] apptainer works
[2025-12-17 03:42:45] Set ATHENA_PROC_NUMBER=4
[2025-12-17 03:42:45] Set ATHENA_CORE_NUMBER=4
[2025-12-17 03:42:45] Starting ATLAS job with PandaID=6930228306
[2025-12-17 03:42:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:21:05]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:21:05] 2025-12-17 04:20:30,436 | INFO     | [data] control thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:30,449 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:30,506 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:30,727 | INFO     | [payload] control thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:30,875 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:30,954 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:31,188 | INFO     | [job] control thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:31,301 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:31,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:21:05] 2025-12-17 04:20:35,834 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:38,730 | INFO     | job.realtimelogging is not enabled
[2025-12-17 05:21:05] 2025-12-17 04:20:39,736 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:21:05] 2025-12-17 04:20:59,123 | INFO     | PID=2314443 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:21:05] 2025-12-17 04:20:59,123 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:21:05] 2025-12-17 04:20:59,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:21:05] 2025-12-17 04:20:59,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:21:05] 2025-12-17 04:21:00,147 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:21:05] 2025-12-17 04:21:00,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717910308672)>', '<ExcThread(monitor, started 140717104011008)>']
[2025-12-17 05:21:05] 2025-12-17 04:21:01,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:21:05] 2025-12-17 04:21:01,134 | INFO     | [monitor] control thread has ended
[2025-12-17 05:21:05] 2025-12-17 04:21:05,403 | INFO     | all workflow threads have been joined
[2025-12-17 05:21:05] 2025-12-17 04:21:05,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:21:05] 2025-12-17 04:21:05,404 | INFO     | traces error code: 0
[2025-12-17 05:21:05] 2025-12-17 04:21:05,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:21:05] 2025-12-17 04:21:05,472 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:21:05] 2025-12-17 04:21:05,476 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:21:05] 2025-12-17 04:21:05,479 [wrapper] pilotpid: 2314443
[2025-12-17 05:21:05] 2025-12-17 04:21:05,483 [wrapper] Pilot exit status: 0
[2025-12-17 05:21:05] 2025-12-17 04:21:05,493 [wrapper] pandaids: 6930228306
[2025-12-17 05:21:05] 2025-12-17 04:21:05,518 [wrapper] cleanup supervisor_pilot 2338903 2314444
[2025-12-17 05:21:05] 2025-12-17 04:21:05,522 [wrapper] Test setup, not cleaning
[2025-12-17 05:21:05] 2025-12-17 04:21:05,525 [wrapper] apfmon messages muted
[2025-12-17 05:21:05] 2025-12-17 04:21:05,529 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:21:05] 2025-12-17 04:21:05,533 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:21:05]  *** Error codes and diagnostics ***
[2025-12-17 05:21:05]     "exeErrorCode": 0,
[2025-12-17 05:21:05]     "exeErrorDiag": "",
[2025-12-17 05:21:05]     "pilotErrorCode": 0,
[2025-12-17 05:21:05]     "pilotErrorDiag": "",
[2025-12-17 05:21:05]  *** Listing of results directory ***
[2025-12-17 05:21:05] total 441428
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc    579449 Dec 16 03:06 pilot3.tar.gz
[2025-12-17 05:21:05] -rwx------ 1 boinc boinc     36322 Dec 16 03:07 runpilot2-wrapper.sh
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc      5112 Dec 16 03:07 queuedata.json
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc       100 Dec 17 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:21:05] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 03:42 run_atlas
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc       105 Dec 17 03:42 job.xml
[2025-12-17 05:21:05] -rw-r--r-- 2 boinc boinc 228197597 Dec 17 03:42 EVNT.47898824._000208.pool.root.1
[2025-12-17 05:21:05] -rw-r--r-- 2 boinc boinc    592391 Dec 17 03:42 input.tar.gz
[2025-12-17 05:21:05] -rw-r--r-- 2 boinc boinc     15847 Dec 17 03:42 start_atlas.sh
[2025-12-17 05:21:05] drwxrwx--x 2 boinc boinc      4096 Dec 17 03:42 shared
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc         0 Dec 17 03:42 boinc_setup_complete
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc      6372 Dec 17 03:42 init_data.xml
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc         0 Dec 17 03:42 boinc_lockfile
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc      2514 Dec 17 03:42 pandaJob.out
[2025-12-17 05:21:05] -rw------- 1 boinc boinc    987409 Dec 17 03:42 agis_schedconf.cvmfs.json
[2025-12-17 05:21:05] -rw------- 1 boinc boinc   1516240 Dec 17 03:42 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:21:05] drwx------ 5 boinc boinc      4096 Dec 17 03:42 pilot3
[2025-12-17 05:21:05] -rw------- 1 boinc boinc 217630146 Dec 17 05:19 HITS.47898826._003653.pool.root.1
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc       529 Dec 17 05:20 boinc_task_state.xml
[2025-12-17 05:21:05] -rw------- 1 boinc boinc      1022 Dec 17 05:20 memory_monitor_summary.json
[2025-12-17 05:21:05] -rw------- 1 boinc boinc    297439 Dec 17 05:20 log.47898826._003653.job.log.tgz.1
[2025-12-17 05:21:05] -rw------- 1 boinc boinc      7768 Dec 17 05:20 heartbeat.json
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc        27 Dec 17 05:20 wrapper_checkpoint.txt
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc      8192 Dec 17 05:20 boinc_mmap_file
[2025-12-17 05:21:05] -rw------- 1 boinc boinc        95 Dec 17 05:20 pilot_heartbeat.json
[2025-12-17 05:21:05] -rw------- 1 boinc boinc      4824 Dec 17 05:21 pilotlog.txt
[2025-12-17 05:21:05] -rw------- 1 boinc boinc    848333 Dec 17 05:21 log.47898826._003653.job.log.1
[2025-12-17 05:21:05] -rw------- 1 boinc boinc       357 Dec 17 05:21 output.list
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc       620 Dec 17 05:21 runtime_log
[2025-12-17 05:21:05] -rw------- 1 boinc boinc   1167360 Dec 17 05:21 result.tar.gz
[2025-12-17 05:21:05] -rw------- 1 boinc boinc       662 Dec 17 05:21 yP1MDm3dZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm98YKDmJI6wtn.diag
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc      8912 Dec 17 05:21 runtime_log.err
[2025-12-17 05:21:05] -rw-r--r-- 1 boinc boinc      5938 Dec 17 05:21 stderr.txt
[2025-12-17 05:21:05] HITS file was successfully produced:
[2025-12-17 05:21:05] -rw------- 1 boinc boinc 217630146 Dec 17 05:19 shared/HITS.pool.root.1
[2025-12-17 05:21:05]  *** Contents of shared directory: ***
[2025-12-17 05:21:05] total 437128
[2025-12-17 05:21:05] -rw-r--r-- 2 boinc boinc 228197597 Dec 17 03:42 ATLAS.root_0
[2025-12-17 05:21:05] -rw-r--r-- 2 boinc boinc    592391 Dec 17 03:42 input.tar.gz
[2025-12-17 05:21:05] -rw-r--r-- 2 boinc boinc     15847 Dec 17 03:42 start_atlas.sh
[2025-12-17 05:21:05] -rw------- 1 boinc boinc 217630146 Dec 17 05:19 HITS.pool.root.1
[2025-12-17 05:21:05] -rw------- 1 boinc boinc   1167360 Dec 17 05:21 result.tar.gz
05:21:07 (2310640): run_atlas exited; CPU time 22475.698289
05:21:07 (2310640): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN