Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:33:48 (888298): wrapper (7.7.26015): starting
03:33:48 (888298): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 03:33:48] Arguments: --nthreads 3
[2025-12-17 03:33:48] Threads: 3
[2025-12-17 03:33:48] Checking for CVMFS
[2025-12-17 03:33:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:33:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:33:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:33:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:33:49] 2.13.3.0 702082 949 58828 154082 3 57 28108169 31457280 0 130560 0 573281 99.988 39545 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-17 03:33:49] CVMFS is ok
[2025-12-17 03:33:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:33:49] Checking for apptainer binary...
[2025-12-17 03:33:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:33:49] Running /usr/bin/apptainer --version
[2025-12-17 03:33:49] apptainer version 1.4.4-1.el9
[2025-12-17 03:33:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:33:49] testio001
[2025-12-17 03:33:49] apptainer works
[2025-12-17 03:33:49] Set ATHENA_PROC_NUMBER=3
[2025-12-17 03:33:49] Set ATHENA_CORE_NUMBER=3
[2025-12-17 03:33:49] Starting ATLAS job with PandaID=6930227925
[2025-12-17 03:33:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:24:24]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:24:24] 2025-12-16 21:23:31,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:24:24] 2025-12-16 21:23:32,842 | INFO     | time since job start (10172s) is within the limit (174528.0s)
[2025-12-17 06:24:24] 2025-12-16 21:23:33,977 | INFO     | monitor loop #759: job 0:6930227925 is in state 'finished'
[2025-12-17 06:24:24] 2025-12-16 21:23:33,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:24:24] 2025-12-16 21:23:34,847 | INFO     | time since job start (10174s) is within the limit (174528.0s)
[2025-12-17 06:24:24] 2025-12-16 21:23:36,479 | INFO     | monitor loop #760: job 0:6930227925 is in state 'finished'
[2025-12-17 06:24:24] 2025-12-16 21:23:36,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:24:24] 2025-12-16 21:23:36,852 | INFO     | time since job start (10176s) is within the limit (174528.0s)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,112 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 06:24:24] 2025-12-16 21:23:37,112 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3675.3685
[2025-12-17 06:24:24] 2025-12-16 21:23:37,113 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6930227925/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,113 | INFO     | extracted standard info from prmon json
[2025-12-17 06:24:24] 2025-12-16 21:23:37,113 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:24:24] 2025-12-16 21:23:37,114 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:24:24] 2025-12-16 21:23:37,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:24:24] 2025-12-16 21:23:37,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:24:24] 2025-12-16 21:23:37,115 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:24:24] 2025-12-16 21:23:37,115 | INFO     | sum of square deviations: 1418365263.475908
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | sum of deviations: -16436017914.379519
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | mean x: 1765915095.5120482
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | mean y: 2350562.439759036
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | intersect: 20465776234.597195
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | chi2: 2.758876299703968
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | sum of square deviations: 1294019355.9751482
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | sum of deviations: -6446646933.521737
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | mean x: 1765914943.0124223
[2025-12-17 06:24:24] 2025-12-16 21:23:37,116 | INFO     | mean y: 2362533.2608695654
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | intersect: 8799935845.950855
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | chi2: 2.131519166394705
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | current chi2=2.131519166394705 (change=22.739589063002917 %)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | right removable region: 160
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | sum of square deviations: 1294018135.9751482
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | sum of deviations: -45466423616.52797
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | mean x: 1765915248.0124223
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | mean y: 2385841.763975155
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | intersect: 62049314323.57686
[2025-12-17 06:24:24] 2025-12-16 21:23:37,117 | INFO     | chi2: 0.9734922790130844
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | current chi2=0.9734922790130844 (change=64.71417442247984 %)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | sum of square deviations: 1177159520.974362
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | sum of deviations: -38529778463.61538
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | mean x: 1765915400.5128205
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | mean y: 2376758.5576923075
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | intersect: 57802809032.109764
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | chi2: 0.9558797243741199
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | current chi2=0.9558797243741199 (change=1.809213593026121 %)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | left removable region: 20
[2025-12-17 06:24:24] 2025-12-16 21:23:37,118 | INFO     | sum of square deviations: 850827332.9714288
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | sum of deviations: -12480734823.828571
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | mean x: 1765915522.5142858
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | mean y: 2365983.1642857143
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | intersect: 25906474259.530144
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | chi2: 0.18716198494969596
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | current memory leak: -14.67 B/s (using 140 data points, chi2=0.19)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | could have reported an average CPU frequency of 3611 MHz (9 samples)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | ..............................
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | . Timing measurements:
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | . get job = 0 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | . initial setup = 6 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | . payload setup = 4 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,119 | INFO     | . stage-in = 0 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,120 | INFO     | . payload execution = 10074 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,120 | INFO     | . stage-out = 0 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,120 | INFO     | . log creation = 0 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,120 | INFO     | ..............................
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | 
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | job summary report
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | --------------------------------------------------
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | PanDA job id: 6930227925
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | task id: 47898763
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | errors: (none)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | pilot state: finished 
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | transexitcode: 0
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | exeerrorcode: 0
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | exeerrordiag: 
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | exitcode: 0
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | exitmsg: OK
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | cpuconsumptiontime: 26999 s
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | nevents: 400
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | neventsw: 0
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | pid: 898513
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | pgrp: 898513
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | corecount: 3
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | event service: False
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | sizes: {0: 2283958, 3: 2284220, 11: 2284248, 10081: 2312897, 10082: 2312896, 10083: 2322134, 10162: 2322336}
[2025-12-17 06:24:24] 2025-12-16 21:23:37,156 | INFO     | --------------------------------------------------
[2025-12-17 06:24:24] 2025-12-16 21:23:37,157 | INFO     | 
[2025-12-17 06:24:24] 2025-12-16 21:23:37,157 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | job 6930227925 has completed (purged errors)
[2025-12-17 06:24:24] 2025-12-16 21:23:37,167 | INFO     | overall cleanup function is called
[2025-12-17 06:24:24] 2025-12-16 21:23:38,173 | INFO     | --- collectZombieJob: --- 10, [898513]
[2025-12-17 06:24:24] 2025-12-16 21:23:38,173 | INFO     | zombie collector waiting for pid 898513
[2025-12-17 06:24:24] 2025-12-16 21:23:38,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:24:24] 2025-12-16 21:23:38,173 | INFO     | collected zombie processes
[2025-12-17 06:24:24] 2025-12-16 21:23:38,173 | INFO     | will attempt to kill all subprocesses of pid=898513
[2025-12-17 06:24:24] 2025-12-16 21:23:38,205 | INFO     | process IDs to be killed: [898513] (in reverse order)
[2025-12-17 06:24:24] 2025-12-16 21:23:38,223 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:24:24] 2025-12-16 21:23:38,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:24:24] 2025-12-16 21:23:38,225 | INFO     | did not find any defunct processes belonging to 898513
[2025-12-17 06:24:24] 2025-12-16 21:23:38,226 | INFO     | did not find any defunct processes belonging to 898513
[2025-12-17 06:24:24] 2025-12-16 21:23:38,226 | INFO     | ready for new job
[2025-12-17 06:24:24] 2025-12-16 21:23:38,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:24:24] 2025-12-16 21:23:38,227 | INFO     | ***************************************
[2025-12-17 06:24:24] 2025-12-16 21:23:38,227 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:24:24] 2025-12-16 21:23:38,227 | INFO     | ***************************************
[2025-12-17 06:24:24] 2025-12-16 21:23:38,227 | INFO     | 
[2025-12-17 06:24:24] 2025-12-16 21:23:38,227 | INFO     | architecture information:
[2025-12-17 06:24:24] 2025-12-16 21:23:38,228 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:24:24] 2025-12-16 21:23:38,235 | INFO     | cat /etc/os-release:
[2025-12-17 06:24:24] NAME="CentOS Linux"
[2025-12-17 06:24:24] VERSION="7 (Core)"
[2025-12-17 06:24:24] ID="centos"
[2025-12-17 06:24:24] ID_LIKE="rhel fedora"
[2025-12-17 06:24:24] VERSION_ID="7"
[2025-12-17 06:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:24:24] ANSI_COLOR="0;31"
[2025-12-17 06:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:24:24] HOME_URL="https://www.centos.org/"
[2025-12-17 06:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:24:24] 
[2025-12-17 06:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:24:24] 
[2025-12-17 06:24:24] 2025-12-16 21:23:38,235 | INFO     | ***************************************
[2025-12-17 06:24:24] 2025-12-16 21:23:38,738 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-12-17 06:24:24] 2025-12-16 21:23:38,746 | INFO     | sufficient remaining disk space (114750914560 B)
[2025-12-17 06:24:24] 2025-12-16 21:23:38,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:24:24] 2025-12-16 21:23:38,746 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | INFO     | update_server=False
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:24:24] 2025-12-16 21:23:38,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:24:24] 2025-12-16 21:23:38,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:24:24] 2025-12-16 21:23:38,982 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 06:24:24] 2025-12-16 21:23:38,982 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 06:24:24] 2025-12-16 21:23:38,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:24:24] 2025-12-16 21:23:38,982 | INFO     | will abort loop
[2025-12-17 06:24:24] 2025-12-16 21:23:39,308 | INFO     | all payload control threads have been joined
[2025-12-17 06:24:24] 2025-12-16 21:23:39,526 | INFO     | all data control threads have been joined
[2025-12-17 06:24:24] 2025-12-16 21:23:39,737 | INFO     | all job control threads have been joined
[2025-12-17 06:24:24] 2025-12-16 21:23:39,750 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:39,752 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:39,795 | INFO     | [job] validate thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:39,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:39,987 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:39,987 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:40,313 | INFO     | [payload] control thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:40,531 | INFO     | [data] control thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:40,608 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:40,742 | INFO     | [job] control thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:40,937 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:40,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:24:24] 2025-12-16 21:23:41,107 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:41,135 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:41,206 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:41,238 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:23:44,943 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:24:24] 2025-12-16 21:24:18,175 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:24:24] 2025-12-16 21:24:19,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522414069568)>', '<ExcThread(monitor, started 140522052114176)>']
[2025-12-17 06:24:24] 2025-12-16 21:24:19,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:24:24] 2025-12-16 21:24:19,949 | INFO     | [monitor] control thread has ended
[2025-12-17 06:24:24] 2025-12-16 21:24:24,276 | INFO     | all workflow threads have been joined
[2025-12-17 06:24:24] 2025-12-16 21:24:24,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:24:24] 2025-12-16 21:24:24,276 | INFO     | traces error code: 0
[2025-12-17 06:24:24] 2025-12-16 21:24:24,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:24:24] 2025-12-16 21:24:24,335 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:24:24] 2025-12-16 21:24:24,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:24:24] 2025-12-16 21:24:24,337 [wrapper] pilotpid: 891981
[2025-12-17 06:24:24] 2025-12-16 21:24:24,339 [wrapper] Pilot exit status: 0
[2025-12-17 06:24:24] 2025-12-16 21:24:24,346 [wrapper] pandaids: 6930227925
[2025-12-17 06:24:24] 2025-12-16 21:24:24,356 [wrapper] cleanup supervisor_pilot  917676 891982
[2025-12-17 06:24:24] 2025-12-16 21:24:24,358 [wrapper] Test setup, not cleaning
[2025-12-17 06:24:24] 2025-12-16 21:24:24,359 [wrapper] apfmon messages muted
[2025-12-17 06:24:24] 2025-12-16 21:24:24,361 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:24:24] 2025-12-16 21:24:24,362 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:24:24]  *** Error codes and diagnostics ***
[2025-12-17 06:24:24]     "exeErrorCode": 0,
[2025-12-17 06:24:24]     "exeErrorDiag": "",
[2025-12-17 06:24:24]     "pilotErrorCode": 0,
[2025-12-17 06:24:24]     "pilotErrorDiag": "",
[2025-12-17 06:24:24]  *** Listing of results directory ***
[2025-12-17 06:24:24] total 445436
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc      5112 Dec 16 11:06 queuedata.json
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc    579449 Dec 16 11:06 pilot3.tar.gz
[2025-12-17 06:24:24] -rwx------. 1 boinc boinc     36322 Dec 16 11:06 runpilot2-wrapper.sh
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc       100 Dec 17 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:24:24] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 03:33 run_atlas
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc       105 Dec 17 03:33 job.xml
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc      9312 Dec 17 03:33 init_data.xml
[2025-12-17 06:24:24] -rw-r--r--. 2 boinc boinc 224797942 Dec 17 03:33 EVNT.47898761._000723.pool.root.1
[2025-12-17 06:24:24] -rw-r--r--. 2 boinc boinc     15847 Dec 17 03:33 start_atlas.sh
[2025-12-17 06:24:24] drwxrwx--x. 2 boinc boinc        68 Dec 17 03:33 shared
[2025-12-17 06:24:24] -rw-r--r--. 2 boinc boinc    592398 Dec 17 03:33 input.tar.gz
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc         0 Dec 17 03:33 boinc_lockfile
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc      2508 Dec 17 03:33 pandaJob.out
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc    987409 Dec 17 03:33 agis_schedconf.cvmfs.json
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc   1516240 Dec 17 03:34 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:24:24] drwx------. 5 boinc boinc      4096 Dec 17 03:34 pilot3
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc 223965432 Dec 17 06:21 HITS.47898763._018198.pool.root.1
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc      1019 Dec 17 06:22 memory_monitor_summary.json
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc    327087 Dec 17 06:22 log.47898763._018198.job.log.tgz.1
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc       530 Dec 17 06:22 boinc_task_state.xml
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc        95 Dec 17 06:23 pilot_heartbeat.json
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc      7769 Dec 17 06:23 heartbeat.json
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc        28 Dec 17 06:24 wrapper_checkpoint.txt
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc      8192 Dec 17 06:24 boinc_mmap_file
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc      4739 Dec 17 06:24 pilotlog.txt
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc   1400372 Dec 17 06:24 log.47898763._018198.job.log.1
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc       357 Dec 17 06:24 output.list
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc       620 Dec 17 06:24 runtime_log
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc   1751040 Dec 17 06:24 result.tar.gz
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc      8776 Dec 17 06:24 runtime_log.err
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc       646 Dec 17 06:24 oJfLDmadZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF4YKDmQ9dqbm.diag
[2025-12-17 06:24:24] -rw-r--r--. 1 boinc boinc     20986 Dec 17 06:24 stderr.txt
[2025-12-17 06:24:24] HITS file was successfully produced:
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc 223965432 Dec 17 06:21 shared/HITS.pool.root.1
[2025-12-17 06:24:24]  *** Contents of shared directory: ***
[2025-12-17 06:24:24] total 440560
[2025-12-17 06:24:24] -rw-r--r--. 2 boinc boinc 224797942 Dec 17 03:33 ATLAS.root_0
[2025-12-17 06:24:24] -rw-r--r--. 2 boinc boinc     15847 Dec 17 03:33 start_atlas.sh
[2025-12-17 06:24:24] -rw-r--r--. 2 boinc boinc    592398 Dec 17 03:33 input.tar.gz
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc 223965432 Dec 17 06:21 HITS.pool.root.1
[2025-12-17 06:24:24] -rw-------. 1 boinc boinc   1751040 Dec 17 06:24 result.tar.gz
06:24:25 (888298): run_atlas exited; CPU time 27040.037133
06:24:25 (888298): called boinc_finish(0)

</stderr_txt>
]]>

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