Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:54:20 (1921345): wrapper (7.7.26015): starting
04:54:20 (1921345): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 04:54:20] Arguments: --nthreads 8
[2025-12-16 04:54:20] Threads: 8
[2025-12-16 04:54:20] Checking for CVMFS
[2025-12-16 04:54:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 04:54:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 04:54:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 04:54:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 04:54:21] 2.11.3.0 1023169 22192 263704 154071 1 656 41263040 45568001 7986 130560 0 86965357 99.760 65127622 23527 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-16 04:54:21] CVMFS is ok
[2025-12-16 04:54:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 04:54:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 04:54:22] Further information can be found at the LHC@home message board.
[2025-12-16 04:54:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 04:54:22] Checking for apptainer binary...
[2025-12-16 04:54:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 04:54:22] Running /usr/bin/apptainer --version
[2025-12-16 04:54:22] apptainer version 1.4.1-1.el9
[2025-12-16 04:54:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 04:54:23] wns0017.triumf.lcg
[2025-12-16 04:54:23] apptainer works
[2025-12-16 04:54:23] Set ATHENA_PROC_NUMBER=8
[2025-12-16 04:54:23] Set ATHENA_CORE_NUMBER=8
[2025-12-16 04:54:24] Starting ATLAS job with PandaID=6930761630
[2025-12-16 04:54:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 05:03:17]  *** The last 200 lines of the pilot log: ***
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | WARNING  | wrong length of table data, x=[1765889918.0, 1765889979.0], y=[1352.0, 574037.0] (must be same and length>=4)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | ..............................
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . Timing measurements:
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . get job = 0 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . initial setup = 9 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . payload setup = 47 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . stage-in = 1 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . payload execution = 136 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . stage-out = 1 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . log creation = 0 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | ..............................
[2025-12-16 05:03:17] 2025-12-16 13:02:33,865 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 05:03:17] 2025-12-16 13:02:33,865 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930761630/pilotlog.txt
[2025-12-16 05:03:17] 2025-12-16 13:02:33,976 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 05:03:17] - Log from pilotlog.txt -
[2025-12-16 05:03:17] 2025-12-16 13:02:33,862 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930761630/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,862 | INFO     | extracted standard info from prmon json
[2025-12-16 05:03:17] 2025-12-16 13:02:33,862 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | WARNING  | wrong length of table data, x=[1765889918.0, 1765889979.0], y=[1352.0, 574037.0] (must be same and length>=4)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | ..............................
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . Timing measurements:
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . get job = 0 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . initial setup = 9 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . payload setup = 47 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . stage-in = 1 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . payload execution = 136 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . stage-out = 1 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . log creation = 0 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | ..............................
[2025-12-16 05:03:17] 2025-12-16 13:02:33,865 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 05:03:17] 2025-12-16 13:02:33,865 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930761630/pilotlog.txt
[2025-12-16 05:03:17] 2025-12-16 13:02:33,977 | WARNING  | 
[2025-12-16 05:03:17] [begin log extracts]
[2025-12-16 05:03:17] - Log from pilotlog.txt -
[2025-12-16 05:03:17] 2025-12-16 13:02:33,862 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930761630/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,862 | INFO     | extracted standard info from prmon json
[2025-12-16 05:03:17] 2025-12-16 13:02:33,862 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 05:03:17] 2025-12-16 13:02:33,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | WARNING  | wrong length of table data, x=[1765889918.0, 1765889979.0], y=[1352.0, 574037.0] (must be same and length>=4)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | ..............................
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . Timing measurements:
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . get job = 0 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . initial setup = 9 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . payload setup = 47 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . stage-in = 1 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . payload execution = 136 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . stage-out = 1 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | . log creation = 0 s
[2025-12-16 05:03:17] 2025-12-16 13:02:33,864 | INFO     | ..............................
[2025-12-16 05:03:17] 2025-12-16 13:02:33,865 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 05:03:17] 2025-12-16 13:02:33,865 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930761630/pilotlog.txt
[2025-12-16 05:03:17] [end log extracts]
[2025-12-16 05:03:17] 2025-12-16 13:02:33,977 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 05:03:17] 2025-12-16 13:02:33,978 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 05:03:17] 2025-12-16 13:02:34,286 | INFO     | PID=1925116 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 05:03:17] 2025-12-16 13:02:34,286 | INFO     | .. there are 26 such processes running
[2025-12-16 05:03:17] 2025-12-16 13:02:34,417 | INFO     | 
[2025-12-16 05:03:17] 2025-12-16 13:02:34,417 | INFO     | job summary report
[2025-12-16 05:03:17] 2025-12-16 13:02:34,417 | INFO     | --------------------------------------------------
[2025-12-16 05:03:17] 2025-12-16 13:02:34,417 | INFO     | PanDA job id: 6930761630
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | task id: 47886831
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 04:59:48,046 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | pilot state: failed 
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | transexitcode: 65
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | exeerrorcode: 65
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | exitcode: 65
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | cpuconsumptiontime: 20 s
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | nevents: 0
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | neventsw: 0
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | pid: 1932109
[2025-12-16 05:03:17] 2025-12-16 13:02:34,418 | INFO     | pgrp: 1932109
[2025-12-16 05:03:17] 2025-12-16 13:02:34,419 | INFO     | corecount: 8
[2025-12-16 05:03:17] 2025-12-16 13:02:34,419 | INFO     | event service: False
[2025-12-16 05:03:17] 2025-12-16 13:02:34,419 | INFO     | sizes: {0: 2283819, 1: 2283990, 2: 2284018, 3: 2284046, 14: 2284074, 26: 2284102, 37: 2284258, 48: 2284286, 60: 2284314, 64: 2284604, 71: 2284660, 187: 2308210, 18
[2025-12-16 05:03:17] 2025-12-16 13:02:34,419 | INFO     | --------------------------------------------------
[2025-12-16 05:03:17] 2025-12-16 13:02:34,419 | INFO     | 
[2025-12-16 05:03:17] 2025-12-16 13:02:34,419 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 05:03:17] 2025-12-16 13:02:34,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 05:03:17] 2025-12-16 13:02:34,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 05:03:17] 2025-12-16 13:02:34,582 | INFO     | job 6930761630 has completed (purged errors)
[2025-12-16 05:03:17] 2025-12-16 13:02:34,582 | INFO     | overall cleanup function is called
[2025-12-16 05:03:17] 2025-12-16 13:02:35,589 | INFO     | --- collectZombieJob: --- 10, [1932109]
[2025-12-16 05:03:17] 2025-12-16 13:02:35,589 | INFO     | zombie collector waiting for pid 1932109
[2025-12-16 05:03:17] 2025-12-16 13:02:35,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 05:03:17] 2025-12-16 13:02:35,590 | INFO     | collected zombie processes
[2025-12-16 05:03:17] 2025-12-16 13:02:35,590 | INFO     | will attempt to kill all subprocesses of pid=1932109
[2025-12-16 05:03:17] 2025-12-16 13:02:36,523 | INFO     | process IDs to be killed: [1932109] (in reverse order)
[2025-12-16 05:03:17] 2025-12-16 13:02:36,605 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 05:03:17] 2025-12-16 13:02:36,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 05:03:17] 2025-12-16 13:02:36,634 | INFO     | did not find any defunct processes belonging to 1932109
[2025-12-16 05:03:17] 2025-12-16 13:02:36,702 | INFO     | did not find any defunct processes belonging to 1932109
[2025-12-16 05:03:17] 2025-12-16 13:02:36,702 | INFO     | ready for new job
[2025-12-16 05:03:17] 2025-12-16 13:02:36,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 05:03:17] 2025-12-16 13:02:36,703 | INFO     | ***************************************
[2025-12-16 05:03:17] 2025-12-16 13:02:36,703 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 05:03:17] 2025-12-16 13:02:36,703 | INFO     | ***************************************
[2025-12-16 05:03:17] 2025-12-16 13:02:36,704 | INFO     | 
[2025-12-16 05:03:17] 2025-12-16 13:02:36,736 | INFO     | architecture information:
[2025-12-16 05:03:17] 2025-12-16 13:02:36,740 | INFO     | executing command: cat /etc/os-release
[2025-12-16 05:03:17] 2025-12-16 13:02:36,891 | INFO     | cat /etc/os-release:
[2025-12-16 05:03:17] NAME="CentOS Linux"
[2025-12-16 05:03:17] VERSION="7 (Core)"
[2025-12-16 05:03:17] ID="centos"
[2025-12-16 05:03:17] ID_LIKE="rhel fedora"
[2025-12-16 05:03:17] VERSION_ID="7"
[2025-12-16 05:03:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 05:03:17] ANSI_COLOR="0;31"
[2025-12-16 05:03:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 05:03:17] HOME_URL="https://www.centos.org/"
[2025-12-16 05:03:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 05:03:17] 
[2025-12-16 05:03:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 05:03:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 05:03:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 05:03:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 05:03:17] 
[2025-12-16 05:03:17] 2025-12-16 13:02:36,891 | INFO     | ***************************************
[2025-12-16 05:03:17] 2025-12-16 13:02:37,395 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 05:03:17] 2025-12-16 13:02:37,474 | INFO     | sufficient remaining disk space (1432802557952 B)
[2025-12-16 05:03:17] 2025-12-16 13:02:37,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 05:03:17] 2025-12-16 13:02:37,475 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 05:03:17] 2025-12-16 13:02:37,475 | INFO     | update_server=False
[2025-12-16 05:03:17] 2025-12-16 13:02:37,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 05:03:17] 2025-12-16 13:02:37,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:03:17] 2025-12-16 13:02:37,478 | INFO     | aborting loop
[2025-12-16 05:03:17] 2025-12-16 13:02:37,480 | INFO     | all data control threads have been joined
[2025-12-16 05:03:17] 2025-12-16 13:02:38,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 05:03:17] 2025-12-16 13:02:38,481 | INFO     | [job] retrieve thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:38,484 | INFO     | [job] job monitor thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:38,486 | INFO     | [data] control thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:38,500 | INFO     | [data] copytool_in thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:38,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 05:03:17] 2025-12-16 13:02:38,632 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:38,713 | INFO     | all job control threads have been joined
[2025-12-16 05:03:17] 2025-12-16 13:02:38,892 | INFO     | all payload control threads have been joined
[2025-12-16 05:03:17] 2025-12-16 13:02:38,929 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:03:17] 2025-12-16 13:02:39,296 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,540 | INFO     | [payload] failed_post thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,687 | INFO     | [payload] validate_post thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,719 | INFO     | [job] control thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,898 | INFO     | [payload] control thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:39,907 | INFO     | [job] validate thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:40,066 | INFO     | [data] copytool_out thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:40,183 | INFO     | [job] queue monitor thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:02:42,617 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 05:03:17] 2025-12-16 13:03:06,740 | INFO     | PID=1925116 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 05:03:17] 2025-12-16 13:03:06,740 | INFO     | .. there are 26 such processes running
[2025-12-16 05:03:17] 2025-12-16 13:03:06,740 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 05:03:17] 2025-12-16 13:03:06,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 05:03:17] 2025-12-16 13:03:06,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 05:03:17] 2025-12-16 13:03:10,640 | INFO     | [monitor] cgroup control has ended
[2025-12-16 05:03:17] 2025-12-16 13:03:11,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139769805526848)>', '<ExcThread(monitor, started 139768922871552)>']
[2025-12-16 05:03:17] 2025-12-16 13:03:11,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 05:03:17] 2025-12-16 13:03:11,774 | INFO     | [monitor] control thread has ended
[2025-12-16 05:03:17] 2025-12-16 13:03:16,080 | INFO     | all workflow threads have been joined
[2025-12-16 05:03:17] 2025-12-16 13:03:16,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 05:03:17] 2025-12-16 13:03:16,081 | INFO     | traces error code: 0
[2025-12-16 05:03:17] 2025-12-16 13:03:16,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 05:03:17] 2025-12-16 13:03:16,610 [wrapper] ==== pilot stdout END ====
[2025-12-16 05:03:17] 2025-12-16 13:03:16,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 05:03:17] 2025-12-16 13:03:16,669 [wrapper] pilotpid: 1925116
[2025-12-16 05:03:17] 2025-12-16 13:03:16,710 [wrapper] Pilot exit status: 0
[2025-12-16 05:03:17] 2025-12-16 13:03:16,785 [wrapper] pandaids: 6930761630
[2025-12-16 05:03:17] 2025-12-16 13:03:17,013 [wrapper] cleanup supervisor_pilot 1925122 1925117
[2025-12-16 05:03:17] 2025-12-16 13:03:17,043 [wrapper] Test setup, not cleaning
[2025-12-16 05:03:17] 2025-12-16 13:03:17,049 [wrapper] apfmon messages muted
[2025-12-16 05:03:17] 2025-12-16 13:03:17,051 [wrapper] ==== wrapper stdout END ====
[2025-12-16 05:03:17] 2025-12-16 13:03:17,053 [wrapper] ==== wrapper stderr END ====
[2025-12-16 05:03:17]  *** Error codes and diagnostics ***
[2025-12-16 05:03:17]     "exeErrorCode": 65,
[2025-12-16 05:03:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 05:03:17]     "pilotErrorCode": 1305,
[2025-12-16 05:03:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 05:03:17]  *** Listing of results directory ***
[2025-12-16 05:03:17] total 193384
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc    579449 Dec 15 22:04 pilot3.tar.gz
[2025-12-16 05:03:17] -rwx------. 1 boinc boinc     36322 Dec 15 22:08 runpilot2-wrapper.sh
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc      5112 Dec 15 22:11 queuedata.json
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc       100 Dec 16 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 05:03:17] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 04:54 run_atlas
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc       105 Dec 16 04:54 job.xml
[2025-12-16 05:03:17] -rw-r--r--. 2 boinc boinc 193844852 Dec 16 04:54 EVNT.47886829._000519.pool.root.1
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc      6446 Dec 16 04:54 init_data.xml
[2025-12-16 05:03:17] -rw-r--r--. 2 boinc boinc     15847 Dec 16 04:54 start_atlas.sh
[2025-12-16 05:03:17] drwxrwx--x. 2 boinc boinc      4096 Dec 16 04:54 shared
[2025-12-16 05:03:17] -rw-r--r--. 2 boinc boinc    592416 Dec 16 04:54 input.tar.gz
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc         0 Dec 16 04:54 boinc_lockfile
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc      2539 Dec 16 04:54 pandaJob.out
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc    990993 Dec 16 04:55 agis_schedconf.cvmfs.json
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc   1516240 Dec 16 04:55 agis_ddmendpoints.agis.ALL.json
[2025-12-16 05:03:17] drwx------. 5 boinc boinc      4096 Dec 16 04:55 pilot3
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc       985 Dec 16 05:00 memory_monitor_summary.json
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc       525 Dec 16 05:00 boinc_task_state.xml
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc     23480 Dec 16 05:00 log.47886831._012637.job.log.tgz.1
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc        95 Dec 16 05:02 pilot_heartbeat.json
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc      8401 Dec 16 05:02 heartbeat.json
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc        23 Dec 16 05:02 wrapper_checkpoint.txt
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc      8192 Dec 16 05:02 boinc_mmap_file
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc      4823 Dec 16 05:03 pilotlog.txt
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc    108576 Dec 16 05:03 log.47886831._012637.job.log.1
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc       188 Dec 16 05:03 output.list
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc       620 Dec 16 05:03 runtime_log
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc    153600 Dec 16 05:03 result.tar.gz
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc      8634 Dec 16 05:03 runtime_log.err
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc       644 Dec 16 05:03 bI9MDmaPdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrgZKDmSetMIo.diag
[2025-12-16 05:03:17] -rw-r--r--. 1 boinc boinc     22033 Dec 16 05:03 stderr.txt
[2025-12-16 05:03:17] No HITS result produced
[2025-12-16 05:03:17]  *** Contents of shared directory: ***
[2025-12-16 05:03:17] total 190056
[2025-12-16 05:03:17] -rw-r--r--. 2 boinc boinc 193844852 Dec 16 04:54 ATLAS.root_0
[2025-12-16 05:03:17] -rw-r--r--. 2 boinc boinc     15847 Dec 16 04:54 start_atlas.sh
[2025-12-16 05:03:17] -rw-r--r--. 2 boinc boinc    592416 Dec 16 04:54 input.tar.gz
[2025-12-16 05:03:17] -rw-------. 1 boinc boinc    153600 Dec 16 05:03 result.tar.gz
05:03:19 (1921345): run_atlas exited; CPU time 37.914674
05:03:19 (1921345): called boinc_finish(0)

</stderr_txt>
]]>

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