Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:10:04 (16772): wrapper (7.7.26015): starting
19:10:04 (16772): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 19:10:04] Arguments: --nthreads 8
[2025-12-16 19:10:04] Threads: 8
[2025-12-16 19:10:04] Checking for CVMFS
[2025-12-16 19:10:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 19:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 19:10:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 19:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 19:10:07] 2.11.2.0 20181 1199 71548 154081 3 208 19412836 25165825 4712 130560 0 865039 99.558 1787559 2453 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 19:10:07] CVMFS is ok
[2025-12-16 19:10:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 19:10:07] Checking for apptainer binary...
[2025-12-16 19:10:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 19:10:07] Running /usr/bin/apptainer --version
[2025-12-16 19:10:07] apptainer version 1.3.2-1.el7
[2025-12-16 19:10:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 19:10:12] cg-vwn427.simple-grid.lan
[2025-12-16 19:10:12] apptainer works
[2025-12-16 19:10:12] Set ATHENA_PROC_NUMBER=8
[2025-12-16 19:10:12] Set ATHENA_CORE_NUMBER=8
[2025-12-16 19:10:12] Starting ATLAS job with PandaID=6930761620
[2025-12-16 19:10:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:47:15]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:47:15] 2025-12-16 22:46:06,100 | INFO     | time since job start (16348s) is within the limit (174528.0s)
[2025-12-16 23:47:15] 2025-12-16 22:46:07,422 | INFO     | monitor loop #1151: job 0:6930761620 is in state 'finished'
[2025-12-16 23:47:15] 2025-12-16 22:46:07,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:47:15] 2025-12-16 22:46:08,112 | INFO     | time since job start (16350s) is within the limit (174528.0s)
[2025-12-16 23:47:15] 2025-12-16 22:46:09,934 | INFO     | monitor loop #1152: job 0:6930761620 is in state 'finished'
[2025-12-16 23:47:15] 2025-12-16 22:46:09,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:47:15] 2025-12-16 22:46:10,119 | INFO     | time since job start (16352s) is within the limit (174528.0s)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,279 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 23:47:15] 2025-12-16 22:46:11,280 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-16 23:47:15] 2025-12-16 22:46:11,282 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6930761620/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,283 | INFO     | extracted standard info from prmon json
[2025-12-16 23:47:15] 2025-12-16 22:46:11,283 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 23:47:15] 2025-12-16 22:46:11,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 23:47:15] 2025-12-16 22:46:11,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 23:47:15] 2025-12-16 22:46:11,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 23:47:15] 2025-12-16 22:46:11,289 | INFO     | fitting pss+swap vs Time
[2025-12-16 23:47:15] 2025-12-16 22:46:11,290 | INFO     | sum of square deviations: 5513070810.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,292 | INFO     | sum of deviations: 23534511931.000004
[2025-12-16 23:47:15] 2025-12-16 22:46:11,293 | INFO     | mean x: 1765917180.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,293 | INFO     | mean y: 2465528.8620689656
[2025-12-16 23:47:15] 2025-12-16 22:46:11,293 | INFO     | intersect: -7535982710.635127
[2025-12-16 23:47:15] 2025-12-16 22:46:11,293 | INFO     | chi2: 5.018242442233157
[2025-12-16 23:47:15] 2025-12-16 22:46:11,294 | INFO     | sum of square deviations: 5202255680.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,296 | INFO     | sum of deviations: 40298028315.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,296 | INFO     | mean x: 1765917027.5
[2025-12-16 23:47:15] 2025-12-16 22:46:11,296 | INFO     | mean y: 2473623.046875
[2025-12-16 23:47:15] 2025-12-16 22:46:11,297 | INFO     | intersect: -13676779907.24782
[2025-12-16 23:47:15] 2025-12-16 22:46:11,297 | INFO     | chi2: 4.282496984700321
[2025-12-16 23:47:15] 2025-12-16 22:46:11,297 | INFO     | current chi2=4.282496984700321 (change=14.66141713961159 %)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,297 | INFO     | right removable region: 255
[2025-12-16 23:47:15] 2025-12-16 22:46:11,298 | INFO     | sum of square deviations: 5202255680.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,300 | INFO     | sum of deviations: -58373445225.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,300 | INFO     | mean x: 1765917332.5
[2025-12-16 23:47:15] 2025-12-16 22:46:11,300 | INFO     | mean y: 2505648.1171875
[2025-12-16 23:47:15] 2025-12-16 22:46:11,300 | INFO     | intersect: 19817502261.38762
[2025-12-16 23:47:15] 2025-12-16 22:46:11,301 | INFO     | chi2: 1.1885406871864925
[2025-12-16 23:47:15] 2025-12-16 22:46:11,301 | INFO     | current chi2=1.1885406871864925 (change=76.31559852143009 %)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,301 | INFO     | sum of square deviations: 4903347750.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,304 | INFO     | sum of deviations: -71493507432.00002
[2025-12-16 23:47:15] 2025-12-16 22:46:11,304 | INFO     | mean x: 1765917485.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,304 | INFO     | mean y: 2512289.115537849
[2025-12-16 23:47:15] 2025-12-16 22:46:11,304 | INFO     | intersect: 25750560617.555283
[2025-12-16 23:47:15] 2025-12-16 22:46:11,304 | INFO     | chi2: 1.0059727683602486
[2025-12-16 23:47:15] 2025-12-16 22:46:11,305 | INFO     | current chi2=1.0059727683602486 (change=15.360678922857723 %)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,305 | INFO     | left removable region: 20
[2025-12-16 23:47:15] 2025-12-16 22:46:11,305 | INFO     | sum of square deviations: 4024149870.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,307 | INFO     | sum of deviations: -37738833216.99999
[2025-12-16 23:47:15] 2025-12-16 22:46:11,307 | INFO     | mean x: 1765917607.0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,308 | INFO     | mean y: 2512884.1319148936
[2025-12-16 23:47:15] 2025-12-16 22:46:11,308 | INFO     | intersect: 16563444310.261116
[2025-12-16 23:47:15] 2025-12-16 22:46:11,308 | INFO     | chi2: 0.19073003908394057
[2025-12-16 23:47:15] 2025-12-16 22:46:11,308 | INFO     | current memory leak: -9.38 B/s (using 235 data points, chi2=0.19)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | ..............................
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | . Timing measurements:
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | . get job = 0 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | . initial setup = 8 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | . payload setup = 108 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,309 | INFO     | . stage-in = 0 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,310 | INFO     | . payload execution = 16011 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,310 | INFO     | . stage-out = 1 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,310 | INFO     | . log creation = 0 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,310 | INFO     | ..............................
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | 
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | job summary report
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | --------------------------------------------------
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | PanDA job id: 6930761620
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | task id: 47886831
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | errors: (none)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | pilot state: finished 
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | transexitcode: 0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | exeerrorcode: 0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | exeerrordiag: 
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | exitcode: 0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | exitmsg: OK
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | cpuconsumptiontime: 61654 s
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | nevents: 400
[2025-12-16 23:47:15] 2025-12-16 22:46:11,438 | INFO     | neventsw: 0
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | pid: 27214
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | pgrp: 27214
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | corecount: 8
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | event service: False
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | sizes: {0: 2283165, 1: 2283851, 2: 2284050, 13: 2284050, 23: 2284106, 34: 2284134, 45: 2284290, 56: 2284318, 66: 2284346, 77: 2284374, 84: 2284692, 88: 2285000, 16
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | --------------------------------------------------
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | 
[2025-12-16 23:47:15] 2025-12-16 22:46:11,439 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-16 23:47:15] 2025-12-16 22:46:11,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,477 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:47:15] 2025-12-16 22:46:11,478 | INFO     | job 6930761620 has completed (purged errors)
[2025-12-16 23:47:15] 2025-12-16 22:46:11,478 | INFO     | overall cleanup function is called
[2025-12-16 23:47:15] 2025-12-16 22:46:12,486 | INFO     | --- collectZombieJob: --- 10, [27214]
[2025-12-16 23:47:15] 2025-12-16 22:46:12,487 | INFO     | zombie collector waiting for pid 27214
[2025-12-16 23:47:15] 2025-12-16 22:46:12,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:47:15] 2025-12-16 22:46:12,487 | INFO     | collected zombie processes
[2025-12-16 23:47:15] 2025-12-16 22:46:12,487 | INFO     | will attempt to kill all subprocesses of pid=27214
[2025-12-16 23:47:15] 2025-12-16 22:46:12,637 | INFO     | process IDs to be killed: [27214] (in reverse order)
[2025-12-16 23:47:15] 2025-12-16 22:46:12,917 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:47:15] 2025-12-16 22:46:12,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:47:15] 2025-12-16 22:46:12,921 | INFO     | did not find any defunct processes belonging to 27214
[2025-12-16 23:47:15] 2025-12-16 22:46:12,945 | INFO     | did not find any defunct processes belonging to 27214
[2025-12-16 23:47:15] 2025-12-16 22:46:12,945 | INFO     | ready for new job
[2025-12-16 23:47:15] 2025-12-16 22:46:12,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:47:15] 2025-12-16 22:46:12,948 | INFO     | ***************************************
[2025-12-16 23:47:15] 2025-12-16 22:46:12,948 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:47:15] 2025-12-16 22:46:12,948 | INFO     | ***************************************
[2025-12-16 23:47:15] 2025-12-16 22:46:12,948 | INFO     | 
[2025-12-16 23:47:15] 2025-12-16 22:46:12,948 | INFO     | pilot is running in a VM
[2025-12-16 23:47:15] 2025-12-16 22:46:12,949 | INFO     | architecture information:
[2025-12-16 23:47:15] 2025-12-16 22:46:12,949 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:47:15] 2025-12-16 22:46:13,047 | INFO     | cat /etc/os-release:
[2025-12-16 23:47:15] NAME="CentOS Linux"
[2025-12-16 23:47:15] VERSION="7 (Core)"
[2025-12-16 23:47:15] ID="centos"
[2025-12-16 23:47:15] ID_LIKE="rhel fedora"
[2025-12-16 23:47:15] VERSION_ID="7"
[2025-12-16 23:47:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:47:15] ANSI_COLOR="0;31"
[2025-12-16 23:47:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:47:15] HOME_URL="https://www.centos.org/"
[2025-12-16 23:47:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:47:15] 
[2025-12-16 23:47:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:47:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:47:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:47:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:47:15] 
[2025-12-16 23:47:15] 2025-12-16 22:46:13,048 | INFO     | ***************************************
[2025-12-16 23:47:15] 2025-12-16 22:46:13,551 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-16 23:47:15] 2025-12-16 22:46:13,590 | INFO     | sufficient remaining disk space (496040411136 B)
[2025-12-16 23:47:15] 2025-12-16 22:46:13,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:47:15] 2025-12-16 22:46:13,590 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:47:15] 2025-12-16 22:46:13,590 | INFO     | update_server=False
[2025-12-16 23:47:15] 2025-12-16 22:46:13,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:47:15] 2025-12-16 22:46:13,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:47:15] 2025-12-16 22:46:13,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:47:15] 2025-12-16 22:46:13,592 | INFO     | aborting loop
[2025-12-16 23:47:15] 2025-12-16 22:46:13,597 | INFO     | all payload control threads have been joined
[2025-12-16 23:47:15] 2025-12-16 22:46:13,790 | INFO     | all data control threads have been joined
[2025-12-16 23:47:15] 2025-12-16 22:46:14,554 | INFO     | all job control threads have been joined
[2025-12-16 23:47:15] 2025-12-16 22:46:14,596 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:14,598 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:14,604 | INFO     | [payload] control thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:14,797 | INFO     | [data] control thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,224 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,248 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,453 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,561 | INFO     | [job] control thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,598 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:47:15] 2025-12-16 22:46:15,944 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:15,953 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:16,058 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:16,072 | INFO     | [job] validate thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:16,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:47:15] 2025-12-16 22:46:17,456 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:19,852 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:24,172 | INFO     | job.realtimelogging is not enabled
[2025-12-16 23:47:15] 2025-12-16 22:46:25,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:47:15] 2025-12-16 22:46:43,325 | INFO     | PID=20616 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 23:47:15] 2025-12-16 22:46:43,326 | INFO     | .. there are 9 such processes running
[2025-12-16 23:47:15] 2025-12-16 22:46:43,326 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:47:15] 2025-12-16 22:46:43,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:47:15] 2025-12-16 22:46:43,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:47:15] 2025-12-16 22:47:06,305 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:47:15] 2025-12-16 22:47:06,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675619239744)>', '<ExcThread(monitor, started 139675306006272)>']
[2025-12-16 23:47:15] 2025-12-16 22:47:06,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:47:15] 2025-12-16 22:47:06,462 | INFO     | [monitor] control thread has ended
[2025-12-16 23:47:15] 2025-12-16 22:47:11,381 | INFO     | all workflow threads have been joined
[2025-12-16 23:47:15] 2025-12-16 22:47:11,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:47:15] 2025-12-16 22:47:11,382 | INFO     | traces error code: 0
[2025-12-16 23:47:15] 2025-12-16 22:47:11,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:47:15] 2025-12-16 22:47:11,684 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:47:15] 2025-12-16 22:47:11,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:47:15] 2025-12-16 22:47:11,970 [wrapper] pilotpid: 20616
[2025-12-16 23:47:15] 2025-12-16 22:47:12,040 [wrapper] Pilot exit status: 0
[2025-12-16 23:47:15] 2025-12-16 22:47:12,422 [wrapper] pandaids: 6930761620
[2025-12-16 23:47:15] 2025-12-16 22:47:12,778 [wrapper] cleanup supervisor_pilot  1025 20617
[2025-12-16 23:47:15] 2025-12-16 22:47:12,798 [wrapper] Test setup, not cleaning
[2025-12-16 23:47:15] 2025-12-16 22:47:12,812 [wrapper] apfmon messages muted
[2025-12-16 23:47:15] 2025-12-16 22:47:12,848 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:47:15] 2025-12-16 22:47:12,963 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:47:15]  *** Error codes and diagnostics ***
[2025-12-16 23:47:15]     "exeErrorCode": 0,
[2025-12-16 23:47:15]     "exeErrorDiag": "",
[2025-12-16 23:47:15]     "pilotErrorCode": 0,
[2025-12-16 23:47:15]     "pilotErrorDiag": "",
[2025-12-16 23:47:15]  *** Listing of results directory ***
[2025-12-16 23:47:15] total 345256
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc    579449 Dec 16 07:04 pilot3.tar.gz
[2025-12-16 23:47:15] -rwx------. 1 boinc boinc     36322 Dec 16 07:08 runpilot2-wrapper.sh
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc      5112 Dec 16 07:11 queuedata.json
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc       100 Dec 16 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:47:15] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 19:10 run_atlas
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc       105 Dec 16 19:10 job.xml
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc      6392 Dec 16 19:10 init_data.xml
[2025-12-16 23:47:15] -rw-r--r--. 2 boinc boinc 193844852 Dec 16 19:10 EVNT.47886829._000519.pool.root.1
[2025-12-16 23:47:15] -rw-r--r--. 2 boinc boinc     15847 Dec 16 19:10 start_atlas.sh
[2025-12-16 23:47:15] drwxrwx--x. 2 boinc boinc        68 Dec 16 19:10 shared
[2025-12-16 23:47:15] -rw-r--r--. 2 boinc boinc    592420 Dec 16 19:10 input.tar.gz
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc         0 Dec 16 19:10 boinc_lockfile
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc      2539 Dec 16 19:10 pandaJob.out
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc    987409 Dec 16 19:13 agis_schedconf.cvmfs.json
[2025-12-16 23:47:15] drwx------. 5 boinc boinc      4096 Dec 16 19:13 pilot3
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc 150489694 Dec 16 23:44 HITS.47886831._012627.pool.root.1
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc       531 Dec 16 23:44 boinc_task_state.xml
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc      1015 Dec 16 23:45 memory_monitor_summary.json
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc   1516240 Dec 16 23:45 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc    476744 Dec 16 23:45 log.47886831._012627.job.log.tgz.1
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc        95 Dec 16 23:45 pilot_heartbeat.json
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc      7770 Dec 16 23:46 heartbeat.json
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc      8192 Dec 16 23:46 boinc_mmap_file
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc        28 Dec 16 23:46 wrapper_checkpoint.txt
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc      4957 Dec 16 23:47 pilotlog.txt
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc   2175961 Dec 16 23:47 log.47886831._012627.job.log.1
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc       357 Dec 16 23:47 output.list
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc       620 Dec 16 23:47 runtime_log
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc   2672640 Dec 16 23:47 result.tar.gz
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc      8833 Dec 16 23:47 runtime_log.err
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc       657 Dec 16 23:47 okjMDmaPdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhgZKDmPLF2sm.diag
[2025-12-16 23:47:15] -rw-r--r--. 1 boinc boinc     20968 Dec 16 23:47 stderr.txt
[2025-12-16 23:47:15] HITS file was successfully produced:
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc 150489694 Dec 16 23:44 shared/HITS.pool.root.1
[2025-12-16 23:47:15]  *** Contents of shared directory: ***
[2025-12-16 23:47:15] total 339476
[2025-12-16 23:47:15] -rw-r--r--. 2 boinc boinc 193844852 Dec 16 19:10 ATLAS.root_0
[2025-12-16 23:47:15] -rw-r--r--. 2 boinc boinc     15847 Dec 16 19:10 start_atlas.sh
[2025-12-16 23:47:15] -rw-r--r--. 2 boinc boinc    592420 Dec 16 19:10 input.tar.gz
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc 150489694 Dec 16 23:44 HITS.pool.root.1
[2025-12-16 23:47:15] -rw-------. 1 boinc boinc   2672640 Dec 16 23:47 result.tar.gz
23:47:17 (16772): run_atlas exited; CPU time 61892.712641
23:47:17 (16772): called boinc_finish(0)

</stderr_txt>
]]>

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