Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:36:34 (26461): wrapper (7.7.26015): starting
20:36:34 (26461): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 20:36:34] Arguments: --nthreads 8
[2025-12-16 20:36:34] Threads: 8
[2025-12-16 20:36:34] Checking for CVMFS
[2025-12-16 20:36:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:36:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:36:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:36:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:36:36] 2.11.2.0 24088 1284 68392 154083 0 61 24071491 25165824 4712 130560 0 925252 99.679 1538470 1250 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 20:36:36] CVMFS is ok
[2025-12-16 20:36:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:36:36] Checking for apptainer binary...
[2025-12-16 20:36:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:36:36] Running /usr/bin/apptainer --version
[2025-12-16 20:36:36] apptainer version 1.3.2-1.el7
[2025-12-16 20:36:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:37:00] cg-vwn483.simple-grid.lan
[2025-12-16 20:37:00] apptainer works
[2025-12-16 20:37:00] Set ATHENA_PROC_NUMBER=8
[2025-12-16 20:37:00] Set ATHENA_CORE_NUMBER=8
[2025-12-16 20:37:00] Starting ATLAS job with PandaID=6930761416
[2025-12-16 20:37:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 00:52:51]  *** The last 200 lines of the pilot log: ***
[2025-12-17 00:52:51] 2025-12-16 23:51:52,765 | INFO     | time since job start (15097s) is within the limit (174528.0s)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,799 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 00:52:51] 2025-12-16 23:51:52,800 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-17 00:52:51] 2025-12-16 23:51:52,802 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6930761416/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,803 | INFO     | extracted standard info from prmon json
[2025-12-17 00:52:51] 2025-12-16 23:51:52,803 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 00:52:51] 2025-12-16 23:51:52,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 00:52:51] 2025-12-16 23:51:52,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 00:52:51] 2025-12-16 23:51:52,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 00:52:51] 2025-12-16 23:51:52,809 | INFO     | fitting pss+swap vs Time
[2025-12-17 00:52:51] 2025-12-16 23:51:52,809 | INFO     | sum of square deviations: 4233158440.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,811 | INFO     | sum of deviations: 73386806949.00012
[2025-12-17 00:52:51] 2025-12-16 23:51:52,812 | INFO     | mean x: 1765921726.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,812 | INFO     | mean y: 2430055.4560669456
[2025-12-17 00:52:51] 2025-12-16 23:51:52,812 | INFO     | intersect: -30611911134.430298
[2025-12-17 00:52:51] 2025-12-16 23:51:52,812 | INFO     | chi2: 5.7487497912889385
[2025-12-17 00:52:51] 2025-12-16 23:51:52,813 | INFO     | sum of square deviations: 3972995422.5
[2025-12-17 00:52:51] 2025-12-16 23:51:52,815 | INFO     | sum of deviations: 87376896906.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,815 | INFO     | mean x: 1765921573.5
[2025-12-17 00:52:51] 2025-12-16 23:51:52,815 | INFO     | mean y: 2438099.4615384615
[2025-12-17 00:52:51] 2025-12-16 23:51:52,815 | INFO     | intersect: -38834945502.32911
[2025-12-17 00:52:51] 2025-12-16 23:51:52,816 | INFO     | chi2: 5.020878390852405
[2025-12-17 00:52:51] 2025-12-16 23:51:52,816 | INFO     | current chi2=5.020878390852405 (change=12.661385985862081 %)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,816 | INFO     | right removable region: 233
[2025-12-17 00:52:51] 2025-12-16 23:51:52,817 | INFO     | sum of square deviations: 3972995422.5
[2025-12-17 00:52:51] 2025-12-16 23:51:52,819 | INFO     | sum of deviations: -5394345259.499996
[2025-12-17 00:52:51] 2025-12-16 23:51:52,819 | INFO     | mean x: 1765921878.5
[2025-12-17 00:52:51] 2025-12-16 23:51:52,819 | INFO     | mean y: 2476182.012820513
[2025-12-17 00:52:51] 2025-12-16 23:51:52,819 | INFO     | intersect: 2400161379.429834
[2025-12-17 00:52:51] 2025-12-16 23:51:52,820 | INFO     | chi2: 1.4383585402714893
[2025-12-17 00:52:51] 2025-12-16 23:51:52,820 | INFO     | current chi2=1.4383585402714893 (change=74.97962874552256 %)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,820 | INFO     | sum of square deviations: 3723716330.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,838 | INFO     | sum of deviations: -26688976383.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,839 | INFO     | mean x: 1765922031.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,839 | INFO     | mean y: 2489080.0305676856
[2025-12-17 00:52:51] 2025-12-16 23:51:52,839 | INFO     | intersect: 12659374622.001589
[2025-12-17 00:52:51] 2025-12-16 23:51:52,839 | INFO     | chi2: 0.9066421546223209
[2025-12-17 00:52:51] 2025-12-16 23:51:52,840 | INFO     | current chi2=0.9066421546223209 (change=36.966887654367966 %)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,840 | INFO     | sum of square deviations: 3485088600.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,842 | INFO     | sum of deviations: -25296051600.499996
[2025-12-17 00:52:51] 2025-12-16 23:51:52,842 | INFO     | mean x: 1765922183.5
[2025-12-17 00:52:51] 2025-12-16 23:51:52,842 | INFO     | mean y: 2488157.5133928573
[2025-12-17 00:52:51] 2025-12-16 23:51:52,842 | INFO     | intersect: 12820199212.630793
[2025-12-17 00:52:51] 2025-12-16 23:51:52,842 | INFO     | chi2: 0.8928777700651331
[2025-12-17 00:52:51] 2025-12-16 23:51:52,843 | INFO     | current chi2=0.8928777700651331 (change=1.518171693982349 %)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,843 | INFO     | left removable region: 30
[2025-12-17 00:52:51] 2025-12-16 23:51:52,843 | INFO     | sum of square deviations: 2593916542.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,844 | INFO     | sum of deviations: 6318062617.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,845 | INFO     | mean x: 1765922458.0
[2025-12-17 00:52:51] 2025-12-16 23:51:52,845 | INFO     | mean y: 2486156.7438423648
[2025-12-17 00:52:51] 2025-12-16 23:51:52,845 | INFO     | intersect: -4298812086.956765
[2025-12-17 00:52:51] 2025-12-16 23:51:52,845 | INFO     | chi2: 0.0008500683949542784
[2025-12-17 00:52:51] 2025-12-16 23:51:52,845 | INFO     | current memory leak: 2.44 B/s (using 203 data points, chi2=0.00)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,846 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-17 00:52:51] 2025-12-16 23:51:52,846 | INFO     | ..............................
[2025-12-17 00:52:51] 2025-12-16 23:51:52,846 | INFO     | . Timing measurements:
[2025-12-17 00:52:51] 2025-12-16 23:51:52,846 | INFO     | . get job = 0 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,846 | INFO     | . initial setup = 6 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,846 | INFO     | . payload setup = 121 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,847 | INFO     | . stage-in = 0 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,847 | INFO     | . payload execution = 14688 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,847 | INFO     | . stage-out = 3 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,847 | INFO     | . log creation = 1 s
[2025-12-17 00:52:51] 2025-12-16 23:51:52,847 | INFO     | ..............................
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | 
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | job summary report
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | --------------------------------------------------
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | PanDA job id: 6930761416
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | task id: 47886831
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | errors: (none)
[2025-12-17 00:52:51] 2025-12-16 23:51:53,099 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | pilot state: finished 
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | transexitcode: 0
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | exeerrorcode: 0
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | exeerrordiag: 
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | exitcode: 0
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | exitmsg: OK
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | cpuconsumptiontime: 54308 s
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | nevents: 400
[2025-12-17 00:52:51] 2025-12-16 23:51:53,100 | INFO     | neventsw: 0
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | pid: 4466
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | pgrp: 4466
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | corecount: 8
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | event service: False
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | sizes: {0: 2283767, 1: 2284022, 12: 2284022, 23: 2284050, 33: 2284078, 44: 2284134, 55: 2284290, 66: 2284318, 76: 2284346, 85: 2284664, 87: 2284692, 14813: 2315221
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | --------------------------------------------------
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | 
[2025-12-17 00:52:51] 2025-12-16 23:51:53,101 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-12-17 00:52:51] 2025-12-16 23:51:53,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 00:52:51] 2025-12-16 23:51:53,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 00:52:51] 2025-12-16 23:51:53,531 | INFO     | job 6930761416 has completed (purged errors)
[2025-12-17 00:52:51] 2025-12-16 23:51:53,531 | INFO     | overall cleanup function is called
[2025-12-17 00:52:51] 2025-12-16 23:51:54,541 | INFO     | --- collectZombieJob: --- 10, [4466]
[2025-12-17 00:52:51] 2025-12-16 23:51:54,541 | INFO     | zombie collector waiting for pid 4466
[2025-12-17 00:52:51] 2025-12-16 23:51:54,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 00:52:51] 2025-12-16 23:51:54,541 | INFO     | collected zombie processes
[2025-12-17 00:52:51] 2025-12-16 23:51:54,541 | INFO     | will attempt to kill all subprocesses of pid=4466
[2025-12-17 00:52:51] 2025-12-16 23:51:54,693 | INFO     | process IDs to be killed: [4466] (in reverse order)
[2025-12-17 00:52:51] 2025-12-16 23:51:55,618 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 00:52:51] 2025-12-16 23:51:55,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 00:52:51] 2025-12-16 23:51:55,622 | INFO     | did not find any defunct processes belonging to 4466
[2025-12-17 00:52:51] 2025-12-16 23:51:55,625 | INFO     | did not find any defunct processes belonging to 4466
[2025-12-17 00:52:51] 2025-12-16 23:51:55,625 | INFO     | ready for new job
[2025-12-17 00:52:51] 2025-12-16 23:51:55,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 00:52:51] 2025-12-16 23:51:55,627 | INFO     | ***************************************
[2025-12-17 00:52:51] 2025-12-16 23:51:55,627 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 00:52:51] 2025-12-16 23:51:55,627 | INFO     | ***************************************
[2025-12-17 00:52:51] 2025-12-16 23:51:55,627 | INFO     | 
[2025-12-17 00:52:51] 2025-12-16 23:51:55,628 | INFO     | pilot is running in a VM
[2025-12-17 00:52:51] 2025-12-16 23:51:55,628 | INFO     | architecture information:
[2025-12-17 00:52:51] 2025-12-16 23:51:55,640 | INFO     | executing command: cat /etc/os-release
[2025-12-17 00:52:51] 2025-12-16 23:51:55,949 | INFO     | cat /etc/os-release:
[2025-12-17 00:52:51] NAME="CentOS Linux"
[2025-12-17 00:52:51] VERSION="7 (Core)"
[2025-12-17 00:52:51] ID="centos"
[2025-12-17 00:52:51] ID_LIKE="rhel fedora"
[2025-12-17 00:52:51] VERSION_ID="7"
[2025-12-17 00:52:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 00:52:51] ANSI_COLOR="0;31"
[2025-12-17 00:52:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 00:52:51] HOME_URL="https://www.centos.org/"
[2025-12-17 00:52:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 00:52:51] 
[2025-12-17 00:52:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 00:52:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 00:52:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 00:52:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 00:52:51] 
[2025-12-17 00:52:51] 2025-12-16 23:51:55,950 | INFO     | ***************************************
[2025-12-17 00:52:51] 2025-12-16 23:51:56,454 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-12-17 00:52:51] 2025-12-16 23:51:56,654 | INFO     | sufficient remaining disk space (495949185024 B)
[2025-12-17 00:52:51] 2025-12-16 23:51:56,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 00:52:51] 2025-12-16 23:51:56,655 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 00:52:51] 2025-12-16 23:51:56,655 | INFO     | update_server=False
[2025-12-17 00:52:51] 2025-12-16 23:51:56,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 00:52:51] 2025-12-16 23:51:56,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 00:52:51] 2025-12-16 23:51:56,657 | INFO     | aborting loop
[2025-12-17 00:52:51] 2025-12-16 23:51:56,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 00:52:51] 2025-12-16 23:51:56,954 | INFO     | all data control threads have been joined
[2025-12-17 00:52:51] 2025-12-16 23:51:57,131 | INFO     | all payload control threads have been joined
[2025-12-17 00:52:51] 2025-12-16 23:51:57,660 | INFO     | [job] retrieve thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:57,663 | INFO     | [job] job monitor thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:57,785 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:57,960 | INFO     | [data] control thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:57,967 | INFO     | all job control threads have been joined
[2025-12-17 00:52:51] 2025-12-16 23:51:57,978 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:58,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 00:52:51] 2025-12-16 23:51:58,138 | INFO     | [payload] control thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:58,152 | INFO     | [payload] failed_post thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:58,270 | INFO     | [data] copytool_in thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:58,656 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:58,727 | INFO     | [data] copytool_out thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:58,973 | INFO     | [job] control thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:59,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:59,062 | INFO     | [job] validate thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:59,117 | INFO     | [job] queue monitor thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:51:59,212 | INFO     | [payload] validate_post thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:52:00,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 00:52:51] 2025-12-16 23:52:04,134 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 00:52:51] 2025-12-16 23:52:25,981 | INFO     | PID=30239 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 00:52:51] 2025-12-16 23:52:25,982 | INFO     | .. there are 9 such processes running
[2025-12-17 00:52:51] 2025-12-16 23:52:25,983 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 00:52:51] 2025-12-16 23:52:25,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 00:52:51] 2025-12-16 23:52:25,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 00:52:51] 2025-12-16 23:52:40,309 | INFO     | [monitor] cgroup control has ended
[2025-12-17 00:52:51] 2025-12-16 23:52:42,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361575561024)>', '<ExcThread(monitor, started 140360990840576)>']
[2025-12-17 00:52:51] 2025-12-16 23:52:42,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 00:52:51] 2025-12-16 23:52:42,080 | INFO     | [monitor] control thread has ended
[2025-12-17 00:52:51] 2025-12-16 23:52:47,048 | INFO     | all workflow threads have been joined
[2025-12-17 00:52:51] 2025-12-16 23:52:47,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 00:52:51] 2025-12-16 23:52:47,048 | INFO     | traces error code: 0
[2025-12-17 00:52:51] 2025-12-16 23:52:47,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 00:52:51] 2025-12-16 23:52:47,388 [wrapper] ==== pilot stdout END ====
[2025-12-17 00:52:51] 2025-12-16 23:52:47,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 00:52:51] 2025-12-16 23:52:47,480 [wrapper] pilotpid: 30239
[2025-12-17 00:52:51] 2025-12-16 23:52:47,527 [wrapper] Pilot exit status: 0
[2025-12-17 00:52:51] 2025-12-16 23:52:47,920 [wrapper] pandaids: 6930761416
[2025-12-17 00:52:51] 2025-12-16 23:52:48,643 [wrapper] cleanup supervisor_pilot 13832 30240
[2025-12-17 00:52:51] 2025-12-16 23:52:48,726 [wrapper] Test setup, not cleaning
[2025-12-17 00:52:51] 2025-12-16 23:52:48,793 [wrapper] apfmon messages muted
[2025-12-17 00:52:51] 2025-12-16 23:52:48,869 [wrapper] ==== wrapper stdout END ====
[2025-12-17 00:52:51] 2025-12-16 23:52:48,945 [wrapper] ==== wrapper stderr END ====
[2025-12-17 00:52:51]  *** Error codes and diagnostics ***
[2025-12-17 00:52:51]     "exeErrorCode": 0,
[2025-12-17 00:52:51]     "exeErrorDiag": "",
[2025-12-17 00:52:51]     "pilotErrorCode": 0,
[2025-12-17 00:52:51]     "pilotErrorDiag": "",
[2025-12-17 00:52:51]  *** Listing of results directory ***
[2025-12-17 00:52:51] total 335744
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc    579449 Dec 16 07:04 pilot3.tar.gz
[2025-12-17 00:52:51] -rwx------. 1 boinc boinc     36322 Dec 16 07:08 runpilot2-wrapper.sh
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc      5112 Dec 16 07:11 queuedata.json
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc       100 Dec 16 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 00:52:51] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 20:36 run_atlas
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc       105 Dec 16 20:36 job.xml
[2025-12-17 00:52:51] -rw-r--r--. 2 boinc boinc    592415 Dec 16 20:36 input.tar.gz
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc      6393 Dec 16 20:36 init_data.xml
[2025-12-17 00:52:51] -rw-r--r--. 2 boinc boinc 190196480 Dec 16 20:36 EVNT.47886829._000512.pool.root.1
[2025-12-17 00:52:51] -rw-r--r--. 2 boinc boinc     15847 Dec 16 20:36 start_atlas.sh
[2025-12-17 00:52:51] drwxrwx--x. 2 boinc boinc        68 Dec 16 20:36 shared
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc         0 Dec 16 20:36 boinc_lockfile
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc      2539 Dec 16 20:37 pandaJob.out
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc    987409 Dec 16 20:40 agis_schedconf.cvmfs.json
[2025-12-17 00:52:51] drwx------. 5 boinc boinc      4096 Dec 16 20:40 pilot3
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc 144740494 Dec 17 00:49 HITS.47886831._012480.pool.root.1
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc       531 Dec 17 00:49 boinc_task_state.xml
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc      1018 Dec 17 00:50 memory_monitor_summary.json
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc   1516240 Dec 17 00:50 agis_ddmendpoints.agis.ALL.json
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc    463730 Dec 17 00:50 log.47886831._012480.job.log.tgz.1
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc      7780 Dec 17 00:51 heartbeat.json
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc        95 Dec 17 00:52 pilot_heartbeat.json
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc      8192 Dec 17 00:52 boinc_mmap_file
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc        28 Dec 17 00:52 wrapper_checkpoint.txt
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc      4885 Dec 17 00:52 pilotlog.txt
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc   2020199 Dec 17 00:52 log.47886831._012480.job.log.1
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc       357 Dec 17 00:52 output.list
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc       620 Dec 17 00:52 runtime_log
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc   2498560 Dec 17 00:52 result.tar.gz
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc      8833 Dec 17 00:52 runtime_log.err
[2025-12-17 00:52:51] -rw-------. 1 boinc boinc       657 Dec 17 00:52 MknLDmRPdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2fZKDmTCD5Nm.diag
[2025-12-17 00:52:51] -rw-r--r--. 1 boinc boinc     20766 Dec 17 00:52 stderr.txt
[2025-12-17 00:52:52] HITS file was successfully produced:
[2025-12-17 00:52:52] -rw-------. 1 boinc boinc 144740494 Dec 17 00:49 shared/HITS.pool.root.1
[2025-12-17 00:52:52]  *** Contents of shared directory: ***
[2025-12-17 00:52:52] total 330128
[2025-12-17 00:52:52] -rw-r--r--. 2 boinc boinc    592415 Dec 16 20:36 input.tar.gz
[2025-12-17 00:52:52] -rw-r--r--. 2 boinc boinc 190196480 Dec 16 20:36 ATLAS.root_0
[2025-12-17 00:52:52] -rw-r--r--. 2 boinc boinc     15847 Dec 16 20:36 start_atlas.sh
[2025-12-17 00:52:52] -rw-------. 1 boinc boinc 144740494 Dec 17 00:49 HITS.pool.root.1
[2025-12-17 00:52:52] -rw-------. 1 boinc boinc   2498560 Dec 17 00:52 result.tar.gz
00:52:53 (26461): run_atlas exited; CPU time 54512.502053
00:52:53 (26461): called boinc_finish(0)

</stderr_txt>
]]>

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