Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:38:17 (1565502): wrapper (7.7.26015): starting
03:38:17 (1565502): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 03:38:17] Arguments: --nthreads 3
[2025-12-17 03:38:17] Threads: 3
[2025-12-17 03:38:17] Checking for CVMFS
[2025-12-17 03:38:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:38:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:38:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:38:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:38:17] 2.9.2.0 256385 5232 83936 154095 1 57 32519630 36864001 0 130560 0 3433716 99.989 189189 19156 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 03:38:17] CVMFS is ok
[2025-12-17 03:38:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 03:38:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 03:38:17] Further information can be found at the LHC@home message board.
[2025-12-17 03:38:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:38:17] Checking for apptainer binary...
[2025-12-17 03:38:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:38:17] Running /usr/bin/apptainer --version
[2025-12-17 03:38:17] apptainer version 1.4.1-1.1
[2025-12-17 03:38:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:38:17] thA305
[2025-12-17 03:38:17] apptainer works
[2025-12-17 03:38:17] Set ATHENA_PROC_NUMBER=3
[2025-12-17 03:38:17] Set ATHENA_CORE_NUMBER=3
[2025-12-17 03:38:17] Starting ATLAS job with PandaID=6930760719
[2025-12-17 03:38:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:30:38]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:30:38] 2025-12-17 04:30:07,202 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:30:38] 2025-12-17 04:30:07,210 | INFO     | cat /etc/os-release:
[2025-12-17 05:30:38] NAME="CentOS Linux"
[2025-12-17 05:30:38] VERSION="7 (Core)"
[2025-12-17 05:30:38] ID="centos"
[2025-12-17 05:30:38] ID_LIKE="rhel fedora"
[2025-12-17 05:30:38] VERSION_ID="7"
[2025-12-17 05:30:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:30:38] ANSI_COLOR="0;31"
[2025-12-17 05:30:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:30:38] HOME_URL="https://www.centos.org/"
[2025-12-17 05:30:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:30:38] 
[2025-12-17 05:30:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:30:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:30:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:30:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:30:38] 
[2025-12-17 05:30:38] 2025-12-17 04:30:07,210 | INFO     | ***************************************
[2025-12-17 05:30:38] 2025-12-17 04:30:07,713 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | INFO     | sufficient remaining disk space (227294576640 B)
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | INFO     | update_server=False
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:30:38] 2025-12-17 04:30:07,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:30:38] 2025-12-17 04:30:07,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:30:38] 2025-12-17 04:30:07,906 | INFO     | aborting loop
[2025-12-17 05:30:38] 2025-12-17 04:30:08,189 | INFO     | all data control threads have been joined
[2025-12-17 05:30:38] 2025-12-17 04:30:08,250 | INFO     | all job control threads have been joined
[2025-12-17 05:30:38] 2025-12-17 04:30:08,560 | INFO     | all payload control threads have been joined
[2025-12-17 05:30:38] 2025-12-17 04:30:08,732 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:08,732 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:08,740 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:08,912 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,193 | INFO     | [data] control thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,255 | INFO     | [job] control thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,276 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,410 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,565 | INFO     | [payload] control thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,575 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:09,732 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:10,043 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:10,173 | INFO     | [job] validate thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:10,216 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:11,733 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:17,838 | INFO     | job.realtimelogging is not enabled
[2025-12-17 05:30:38] 2025-12-17 04:30:18,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:30:38] 2025-12-17 04:30:31,122 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:30:38] 2025-12-17 04:30:31,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106203461440)>', '<ExcThread(monitor, started 140105566111488)>']
[2025-12-17 05:30:38] 2025-12-17 04:30:36,141 | INFO     | all workflow threads have been joined
[2025-12-17 05:30:38] 2025-12-17 04:30:36,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:30:38] 2025-12-17 04:30:36,143 | INFO     | traces error code: 0
[2025-12-17 05:30:38] 2025-12-17 04:30:36,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:30:38] 2025-12-17 04:30:38,058 | INFO     | PID=1569224 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:30:38] 2025-12-17 04:30:38,058 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:30:38] 2025-12-17 04:30:38,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:30:38] 2025-12-17 04:30:38,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:30:38] 2025-12-17 04:30:38,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:30:38] 2025-12-17 04:30:38,058 | INFO     | [monitor] control thread has ended
[2025-12-17 05:30:38] 2025-12-17 04:30:38,105 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:30:38] 2025-12-17 04:30:38,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:30:38] 2025-12-17 04:30:38,109 [wrapper] pilotpid: 1569224
[2025-12-17 05:30:38] 2025-12-17 04:30:38,111 [wrapper] Pilot exit status: 0
[2025-12-17 05:30:38] 2025-12-17 04:30:38,119 [wrapper] pandaids: 6930760719
[2025-12-17 05:30:38] 2025-12-17 04:30:38,134 [wrapper] cleanup supervisor_pilot 1590009 1569225
[2025-12-17 05:30:38] 2025-12-17 04:30:38,137 [wrapper] Test setup, not cleaning
[2025-12-17 05:30:38] 2025-12-17 04:30:38,139 [wrapper] apfmon messages muted
[2025-12-17 05:30:38] 2025-12-17 04:30:38,141 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:30:38] 2025-12-17 04:30:38,143 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:30:38]  *** Error codes and diagnostics ***
[2025-12-17 05:30:38]     "exeErrorCode": 0,
[2025-12-17 05:30:38]     "exeErrorDiag": "",
[2025-12-17 05:30:38]     "pilotErrorCode": 0,
[2025-12-17 05:30:38]     "pilotErrorDiag": "",
[2025-12-17 05:30:38]  *** Listing of results directory ***
[2025-12-17 05:30:38] total 404028
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc    579449 Dec 16 07:04 pilot3.tar.gz
[2025-12-17 05:30:38] -rwx------ 1 boinc boinc     36322 Dec 16 07:07 runpilot2-wrapper.sh
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc      5112 Dec 16 07:09 queuedata.json
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc       100 Dec 17 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:30:38] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 03:38 run_atlas
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc       105 Dec 17 03:38 job.xml
[2025-12-17 05:30:38] -rw-r--r-- 2 boinc boinc 214286495 Dec 17 03:38 EVNT.47898779._000202.pool.root.1
[2025-12-17 05:30:38] -rw-r--r-- 2 boinc boinc    592393 Dec 17 03:38 input.tar.gz
[2025-12-17 05:30:38] -rw-r--r-- 2 boinc boinc     15847 Dec 17 03:38 start_atlas.sh
[2025-12-17 05:30:38] drwxrwx--x 2 boinc boinc      4096 Dec 17 03:38 shared
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc         0 Dec 17 03:38 boinc_setup_complete
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc      6439 Dec 17 03:38 init_data.xml
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc         0 Dec 17 03:38 boinc_lockfile
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc      2522 Dec 17 03:38 pandaJob.out
[2025-12-17 05:30:38] -rw------- 1 boinc boinc    987409 Dec 17 03:38 agis_schedconf.cvmfs.json
[2025-12-17 05:30:38] -rw------- 1 boinc boinc   1516240 Dec 17 03:38 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:30:38] drwx------ 5 boinc boinc      4096 Dec 17 03:38 pilot3
[2025-12-17 05:30:38] -rw------- 1 boinc boinc 193050994 Dec 17 05:29 HITS.47898782._004967.pool.root.1
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc       529 Dec 17 05:29 boinc_task_state.xml
[2025-12-17 05:30:38] -rw------- 1 boinc boinc        95 Dec 17 05:29 pilot_heartbeat.json
[2025-12-17 05:30:38] -rw------- 1 boinc boinc      1019 Dec 17 05:29 memory_monitor_summary.json
[2025-12-17 05:30:38] -rw------- 1 boinc boinc    276574 Dec 17 05:29 log.47898782._004967.job.log.tgz.1
[2025-12-17 05:30:38] -rw------- 1 boinc boinc      7755 Dec 17 05:30 heartbeat.json
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc        27 Dec 17 05:30 wrapper_checkpoint.txt
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc      8192 Dec 17 05:30 boinc_mmap_file
[2025-12-17 05:30:38] -rw------- 1 boinc boinc       747 Dec 17 05:30 pilotlog.txt
[2025-12-17 05:30:38] -rw------- 1 boinc boinc    967848 Dec 17 05:30 log.47898782._004967.job.log.1
[2025-12-17 05:30:38] -rw------- 1 boinc boinc       357 Dec 17 05:30 output.list
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc       620 Dec 17 05:30 runtime_log
[2025-12-17 05:30:38] -rw------- 1 boinc boinc   1259520 Dec 17 05:30 result.tar.gz
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc      8897 Dec 17 05:30 runtime_log.err
[2025-12-17 05:30:38] -rw------- 1 boinc boinc       659 Dec 17 05:30 91lLDmgOdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1EVKDmksMktn.diag
[2025-12-17 05:30:38] -rw-r--r-- 1 boinc boinc      8979 Dec 17 05:30 stderr.txt
[2025-12-17 05:30:38] HITS file was successfully produced:
[2025-12-17 05:30:38] -rw------- 1 boinc boinc 193050994 Dec 17 05:29 shared/HITS.pool.root.1
[2025-12-17 05:30:38]  *** Contents of shared directory: ***
[2025-12-17 05:30:38] total 399632
[2025-12-17 05:30:38] -rw-r--r-- 2 boinc boinc 214286495 Dec 17 03:38 ATLAS.root_0
[2025-12-17 05:30:38] -rw-r--r-- 2 boinc boinc    592393 Dec 17 03:38 input.tar.gz
[2025-12-17 05:30:38] -rw-r--r-- 2 boinc boinc     15847 Dec 17 03:38 start_atlas.sh
[2025-12-17 05:30:38] -rw------- 1 boinc boinc 193050994 Dec 17 05:29 HITS.pool.root.1
[2025-12-17 05:30:38] -rw------- 1 boinc boinc   1259520 Dec 17 05:30 result.tar.gz
05:30:39 (1565502): run_atlas exited; CPU time 19408.381401
05:30:39 (1565502): called boinc_finish(0)

</stderr_txt>
]]>

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