Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:42:53 (3084866): wrapper (7.7.26015): starting
04:42:53 (3084866): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 04:42:53] Arguments: --nthreads 12
[2025-12-16 04:42:53] Threads: 12
[2025-12-16 04:42:53] Checking for CVMFS
[2025-12-16 04:42:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 04:42:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 04:42:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 04:42:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 04:42:55] 2.11.5.0 3459277 22006 402344 154071 1 641 34188893 45568001 11879 130560 0 131158261 99.717 115162646 25947 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-16 04:42:55] CVMFS is ok
[2025-12-16 04:42:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 04:42:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 04:42:55] Further information can be found at the LHC@home message board.
[2025-12-16 04:42:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 04:42:55] Checking for apptainer binary...
[2025-12-16 04:42:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 04:42:55] Running /usr/bin/apptainer --version
[2025-12-16 04:42:56] apptainer version 1.4.1-1.el9
[2025-12-16 04:42:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 04:42:57] wns0066.triumf.lcg
[2025-12-16 04:42:57] apptainer works
[2025-12-16 04:42:57] Set ATHENA_PROC_NUMBER=12
[2025-12-16 04:42:57] Set ATHENA_CORE_NUMBER=12
[2025-12-16 04:42:57] Starting ATLAS job with PandaID=6930760623
[2025-12-16 04:42:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 04:48:43]  *** The last 200 lines of the pilot log: ***
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | wrong length of table data, x=[1765889101.0], y=[1359.0] (must be same and length>=4)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | INFO     | could have reported an average CPU frequency of 2645 MHz (4 samples)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | ..............................
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . Timing measurements:
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . get job = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . initial setup = 4 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . payload setup = 17 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . stage-in = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . payload execution = 59 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . stage-out = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . log creation = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | ..............................
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930760623/pilotlog.txt
[2025-12-16 04:48:44] 2025-12-16 12:47:50,597 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 04:48:44] - Log from pilotlog.txt -
[2025-12-16 04:48:44] 2025-12-16 12:47:50,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930760623/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | INFO     | extracted standard info from prmon json
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | wrong length of table data, x=[1765889101.0], y=[1359.0] (must be same and length>=4)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | INFO     | could have reported an average CPU frequency of 2645 MHz (4 samples)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | ..............................
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . Timing measurements:
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . get job = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . initial setup = 4 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . payload setup = 17 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . stage-in = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . payload execution = 59 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . stage-out = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . log creation = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | ..............................
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930760623/pilotlog.txt
[2025-12-16 04:48:44] 2025-12-16 12:47:50,597 | WARNING  | 
[2025-12-16 04:48:44] [begin log extracts]
[2025-12-16 04:48:44] - Log from pilotlog.txt -
[2025-12-16 04:48:44] 2025-12-16 12:47:50,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930760623/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | INFO     | extracted standard info from prmon json
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 04:48:44] 2025-12-16 12:47:50,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | WARNING  | wrong length of table data, x=[1765889101.0], y=[1359.0] (must be same and length>=4)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,515 | INFO     | could have reported an average CPU frequency of 2645 MHz (4 samples)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | ..............................
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . Timing measurements:
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . get job = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . initial setup = 4 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . payload setup = 17 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . stage-in = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . payload execution = 59 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . stage-out = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | . log creation = 0 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | ..............................
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 04:48:44] 2025-12-16 12:47:50,516 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930760623/pilotlog.txt
[2025-12-16 04:48:44] [end log extracts]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,597 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,598 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | 
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | job summary report
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | --------------------------------------------------
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | PanDA job id: 6930760623
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | task id: 47898782
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 04:45:28,097 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | pilot state: failed 
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | transexitcode: 65
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | exeerrorcode: 65
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,777 | INFO     | exitcode: 65
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | cpuconsumptiontime: 17 s
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | nevents: 0
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | neventsw: 0
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | pid: 3099103
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | pgrp: 3099103
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | corecount: 12
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | event service: False
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | sizes: {0: 2283152, 1: 2283834, 2: 2284005, 3: 2284033, 14: 2284061, 23: 2284351, 25: 2284507, 80: 2307734, 81: 2312026, 84: 2312054, 214: 2312220}
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | --------------------------------------------------
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | 
[2025-12-16 04:48:44] 2025-12-16 12:47:50,778 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 04:48:44] 2025-12-16 12:47:50,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 04:48:44] 2025-12-16 12:47:50,872 | INFO     | job 6930760623 has completed (purged errors)
[2025-12-16 04:48:44] 2025-12-16 12:47:50,872 | INFO     | overall cleanup function is called
[2025-12-16 04:48:44] 2025-12-16 12:47:51,879 | INFO     | --- collectZombieJob: --- 10, [3099103]
[2025-12-16 04:48:44] 2025-12-16 12:47:51,879 | INFO     | zombie collector waiting for pid 3099103
[2025-12-16 04:48:44] 2025-12-16 12:47:51,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 04:48:44] 2025-12-16 12:47:51,879 | INFO     | collected zombie processes
[2025-12-16 04:48:44] 2025-12-16 12:47:51,879 | INFO     | will attempt to kill all subprocesses of pid=3099103
[2025-12-16 04:48:44] 2025-12-16 12:47:52,059 | INFO     | process IDs to be killed: [3099103] (in reverse order)
[2025-12-16 04:48:44] 2025-12-16 12:47:52,310 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 04:48:44] 2025-12-16 12:47:52,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 04:48:44] 2025-12-16 12:47:52,348 | INFO     | did not find any defunct processes belonging to 3099103
[2025-12-16 04:48:44] 2025-12-16 12:47:52,374 | INFO     | did not find any defunct processes belonging to 3099103
[2025-12-16 04:48:44] 2025-12-16 12:47:52,394 | INFO     | ready for new job
[2025-12-16 04:48:44] 2025-12-16 12:47:52,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 04:48:44] 2025-12-16 12:47:52,396 | INFO     | ***************************************
[2025-12-16 04:48:44] 2025-12-16 12:47:52,396 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 04:48:44] 2025-12-16 12:47:52,396 | INFO     | ***************************************
[2025-12-16 04:48:44] 2025-12-16 12:47:52,396 | INFO     | 
[2025-12-16 04:48:44] 2025-12-16 12:47:52,406 | INFO     | architecture information:
[2025-12-16 04:48:44] 2025-12-16 12:47:52,410 | INFO     | executing command: cat /etc/os-release
[2025-12-16 04:48:44] 2025-12-16 12:47:52,507 | INFO     | cat /etc/os-release:
[2025-12-16 04:48:44] NAME="CentOS Linux"
[2025-12-16 04:48:44] VERSION="7 (Core)"
[2025-12-16 04:48:44] ID="centos"
[2025-12-16 04:48:44] ID_LIKE="rhel fedora"
[2025-12-16 04:48:44] VERSION_ID="7"
[2025-12-16 04:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 04:48:44] ANSI_COLOR="0;31"
[2025-12-16 04:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 04:48:44] HOME_URL="https://www.centos.org/"
[2025-12-16 04:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 04:48:44] 
[2025-12-16 04:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 04:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 04:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 04:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 04:48:44] 
[2025-12-16 04:48:44] 2025-12-16 12:47:52,507 | INFO     | ***************************************
[2025-12-16 04:48:44] 2025-12-16 12:47:53,013 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 04:48:44] 2025-12-16 12:47:53,029 | INFO     | sufficient remaining disk space (2119527563264 B)
[2025-12-16 04:48:44] 2025-12-16 12:47:53,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 04:48:44] 2025-12-16 12:47:53,030 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 04:48:44] 2025-12-16 12:47:53,030 | INFO     | update_server=False
[2025-12-16 04:48:44] 2025-12-16 12:47:53,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 04:48:44] 2025-12-16 12:47:53,145 | INFO     | all data control threads have been joined
[2025-12-16 04:48:44] 2025-12-16 12:47:53,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:48:44] 2025-12-16 12:47:53,261 | INFO     | aborting loop
[2025-12-16 04:48:44] 2025-12-16 12:47:53,579 | INFO     | all job control threads have been joined
[2025-12-16 04:48:44] 2025-12-16 12:47:53,723 | INFO     | all payload control threads have been joined
[2025-12-16 04:48:44] 2025-12-16 12:47:53,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 04:48:44] 2025-12-16 12:47:54,036 | INFO     | [job] retrieve thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,096 | INFO     | [payload] validate_post thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 04:48:44] 2025-12-16 12:47:54,151 | INFO     | [data] control thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,158 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,267 | INFO     | [job] job monitor thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,334 | INFO     | [data] copytool_in thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,446 | INFO     | [job] validate thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,586 | INFO     | [job] control thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,729 | INFO     | [payload] control thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:54,767 | INFO     | [payload] failed_post thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:55,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:55,167 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:55,167 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:55,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:48:44] 2025-12-16 12:47:56,176 | INFO     | [data] copytool_out thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:56,801 | INFO     | [job] queue monitor thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:47:57,792 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 04:48:44] 2025-12-16 12:48:22,701 | INFO     | PID=3088866 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 04:48:44] 2025-12-16 12:48:22,701 | INFO     | .. there are 27 such processes running
[2025-12-16 04:48:44] 2025-12-16 12:48:22,701 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 04:48:44] 2025-12-16 12:48:22,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 04:48:44] 2025-12-16 12:48:22,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 04:48:44] 2025-12-16 12:48:37,302 | INFO     | [monitor] cgroup control has ended
[2025-12-16 04:48:44] 2025-12-16 12:48:38,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702038591296)>', '<ExcThread(monitor, started 139701059057408)>']
[2025-12-16 04:48:44] 2025-12-16 12:48:38,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 04:48:44] 2025-12-16 12:48:38,805 | INFO     | [monitor] control thread has ended
[2025-12-16 04:48:44] 2025-12-16 12:48:43,189 | INFO     | all workflow threads have been joined
[2025-12-16 04:48:44] 2025-12-16 12:48:43,189 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 04:48:44] 2025-12-16 12:48:43,189 | INFO     | traces error code: 0
[2025-12-16 04:48:44] 2025-12-16 12:48:43,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 04:48:44] 2025-12-16 12:48:43,352 [wrapper] ==== pilot stdout END ====
[2025-12-16 04:48:44] 2025-12-16 12:48:43,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 04:48:44] 2025-12-16 12:48:43,361 [wrapper] pilotpid: 3088866
[2025-12-16 04:48:44] 2025-12-16 12:48:43,364 [wrapper] Pilot exit status: 0
[2025-12-16 04:48:44] 2025-12-16 12:48:43,391 [wrapper] pandaids: 6930760623
[2025-12-16 04:48:44] 2025-12-16 12:48:43,674 [wrapper] cleanup supervisor_pilot 3088872 3088867
[2025-12-16 04:48:44] 2025-12-16 12:48:43,678 [wrapper] Test setup, not cleaning
[2025-12-16 04:48:44] 2025-12-16 12:48:43,695 [wrapper] apfmon messages muted
[2025-12-16 04:48:44] 2025-12-16 12:48:43,700 [wrapper] ==== wrapper stdout END ====
[2025-12-16 04:48:44] 2025-12-16 12:48:43,701 [wrapper] ==== wrapper stderr END ====
[2025-12-16 04:48:44]  *** Error codes and diagnostics ***
[2025-12-16 04:48:44]     "exeErrorCode": 65,
[2025-12-16 04:48:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 04:48:44]     "pilotErrorCode": 1305,
[2025-12-16 04:48:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 04:48:44]  *** Listing of results directory ***
[2025-12-16 04:48:44] total 211300
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc    579449 Dec 15 22:04 pilot3.tar.gz
[2025-12-16 04:48:44] -rwx------. 1 boinc boinc     36322 Dec 15 22:07 runpilot2-wrapper.sh
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc      5112 Dec 15 22:09 queuedata.json
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc       100 Dec 16 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 04:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 04:42 run_atlas
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc       105 Dec 16 04:42 job.xml
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc      6596 Dec 16 04:42 init_data.xml
[2025-12-16 04:48:44] -rw-r--r--. 2 boinc boinc 212227461 Dec 16 04:42 EVNT.47898779._000198.pool.root.1
[2025-12-16 04:48:44] -rw-r--r--. 2 boinc boinc     15847 Dec 16 04:42 start_atlas.sh
[2025-12-16 04:48:44] drwxrwx--x. 2 boinc boinc      4096 Dec 16 04:42 shared
[2025-12-16 04:48:44] -rw-r--r--. 2 boinc boinc    592397 Dec 16 04:42 input.tar.gz
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc         0 Dec 16 04:42 boinc_lockfile
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc      2522 Dec 16 04:42 pandaJob.out
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc    990993 Dec 16 04:43 agis_schedconf.cvmfs.json
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc   1516240 Dec 16 04:43 agis_ddmendpoints.agis.ALL.json
[2025-12-16 04:48:44] drwx------. 5 boinc boinc      4096 Dec 16 04:43 pilot3
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc       523 Dec 16 04:45 boinc_task_state.xml
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc       954 Dec 16 04:45 memory_monitor_summary.json
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc     21764 Dec 16 04:45 log.47898782._004871.job.log.tgz.1
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc        95 Dec 16 04:47 pilot_heartbeat.json
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc      8392 Dec 16 04:47 heartbeat.json
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc      8192 Dec 16 04:48 boinc_mmap_file
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc        22 Dec 16 04:48 wrapper_checkpoint.txt
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc      4823 Dec 16 04:48 pilotlog.txt
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc     92736 Dec 16 04:48 log.47898782._004871.job.log.1
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc       188 Dec 16 04:48 output.list
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc       620 Dec 16 04:48 runtime_log
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc    133120 Dec 16 04:48 result.tar.gz
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc       645 Dec 16 04:48 U7NKDmgOdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTEVKDmlIQwem.diag
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc      8636 Dec 16 04:48 runtime_log.err
[2025-12-16 04:48:44] -rw-r--r--. 1 boinc boinc     21830 Dec 16 04:48 stderr.txt
[2025-12-16 04:48:44] No HITS result produced
[2025-12-16 04:48:44]  *** Contents of shared directory: ***
[2025-12-16 04:48:44] total 207988
[2025-12-16 04:48:44] -rw-r--r--. 2 boinc boinc 212227461 Dec 16 04:42 ATLAS.root_0
[2025-12-16 04:48:44] -rw-r--r--. 2 boinc boinc     15847 Dec 16 04:42 start_atlas.sh
[2025-12-16 04:48:44] -rw-r--r--. 2 boinc boinc    592397 Dec 16 04:42 input.tar.gz
[2025-12-16 04:48:44] -rw-------. 1 boinc boinc    133120 Dec 16 04:48 result.tar.gz
04:48:45 (3084866): run_atlas exited; CPU time 28.584555
04:48:45 (3084866): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN