Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:23:09 (2024206): wrapper (7.7.26015): starting
06:23:09 (2024206): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 06:23:09] Arguments: --nthreads 4
[2025-12-16 06:23:09] Threads: 4
[2025-12-16 06:23:09] Checking for CVMFS
[2025-12-16 06:23:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 06:23:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 06:23:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 06:23:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 06:23:19] 2.12.6.0 2024432 0 25316 154071 3 1 3316077 4194305 0 130560 0 0 0.000 1336 687 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-16 06:23:19] CVMFS is ok
[2025-12-16 06:23:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 06:23:19] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-16 06:23:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-16 06:23:19] Further information can be found at the LHC@home message board.
[2025-12-16 06:23:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 06:23:19] Checking for apptainer binary...
[2025-12-16 06:23:19] apptainer is not installed, using version from CVMFS
[2025-12-16 06:23:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 06:23:22] Kthanid-Penguin
[2025-12-16 06:23:22] apptainer works
[2025-12-16 06:23:22] Set ATHENA_PROC_NUMBER=4
[2025-12-16 06:23:22] Set ATHENA_CORE_NUMBER=4
[2025-12-16 06:23:22] Starting ATLAS job with PandaID=6930760642
[2025-12-16 06:23:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 09:07:55]  *** The last 200 lines of the pilot log: ***
[2025-12-16 09:07:55] 2025-12-16 15:07:15,526 | INFO     | maximum number of monitored processes: 6
[2025-12-16 09:07:55] 2025-12-16 15:07:15,807 | INFO     | time since job start (9776s) is within the limit (174528.0s)
[2025-12-16 09:07:55] 2025-12-16 15:07:17,813 | INFO     | time since job start (9778s) is within the limit (174528.0s)
[2025-12-16 09:07:55] 2025-12-16 15:07:18,028 | INFO     | monitor loop #743: job 0:6930760642 is in state 'finished'
[2025-12-16 09:07:55] 2025-12-16 15:07:18,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 09:07:55] 2025-12-16 15:07:19,817 | INFO     | time since job start (9780s) is within the limit (174528.0s)
[2025-12-16 09:07:55] 2025-12-16 15:07:20,533 | INFO     | monitor loop #744: job 0:6930760642 is in state 'finished'
[2025-12-16 09:07:55] 2025-12-16 15:07:20,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 09:07:55] 2025-12-16 15:07:21,822 | INFO     | time since job start (9782s) is within the limit (174528.0s)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,211 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 09:07:55] 2025-12-16 15:07:22,212 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3874.094166666667
[2025-12-16 09:07:55] 2025-12-16 15:07:22,214 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6930760642/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,214 | INFO     | extracted standard info from prmon json
[2025-12-16 09:07:55] 2025-12-16 15:07:22,214 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 09:07:55] 2025-12-16 15:07:22,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 09:07:55] 2025-12-16 15:07:22,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 09:07:55] 2025-12-16 15:07:22,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 09:07:55] 2025-12-16 15:07:22,216 | INFO     | fitting pss+swap vs Time
[2025-12-16 09:07:55] 2025-12-16 15:07:22,216 | INFO     | sum of square deviations: 1270051720.0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,216 | INFO     | sum of deviations: -2695385710.9999943
[2025-12-16 09:07:55] 2025-12-16 15:07:22,216 | INFO     | mean x: 1765892743.5
[2025-12-16 09:07:55] 2025-12-16 15:07:22,216 | INFO     | mean y: 2366944.025
[2025-12-16 09:07:55] 2025-12-16 15:07:22,216 | INFO     | intersect: 3750058469.5232515
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | chi2: 3.180329448839429
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | sum of square deviations: 1154663510.0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | sum of deviations: -2293942210.0000196
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | mean x: 1765892591.0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | mean y: 2367473.7032258064
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | intersect: 3510623790.5770483
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | chi2: 3.1812945509508457
[2025-12-16 09:07:55] 2025-12-16 15:07:22,217 | INFO     | current chi2=3.1812945509508457 (change=-0.030345979149069755 %)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,218 | INFO     | right removable region: 154
[2025-12-16 09:07:55] 2025-12-16 15:07:22,218 | INFO     | sum of square deviations: 1154663510.0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,218 | INFO     | sum of deviations: -42188227934.0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,218 | INFO     | mean x: 1765892896.0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,218 | INFO     | mean y: 2418873.5161290322
[2025-12-16 09:07:55] 2025-12-16 15:07:22,218 | INFO     | intersect: 64523286951.76635
[2025-12-16 09:07:55] 2025-12-16 15:07:22,219 | INFO     | chi2: 0.29087886753742986
[2025-12-16 09:07:55] 2025-12-16 15:07:22,219 | INFO     | current chi2=0.29087886753742986 (change=90.85381334806122 %)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,219 | INFO     | sum of square deviations: 1046484737.5
[2025-12-16 09:07:55] 2025-12-16 15:07:22,219 | INFO     | sum of deviations: -43159665469.5
[2025-12-16 09:07:55] 2025-12-16 15:07:22,219 | INFO     | mean x: 1765893048.5
[2025-12-16 09:07:55] 2025-12-16 15:07:22,220 | INFO     | mean y: 2420177.2733333334
[2025-12-16 09:07:55] 2025-12-16 15:07:22,220 | INFO     | intersect: 72832295756.96906
[2025-12-16 09:07:55] 2025-12-16 15:07:22,220 | INFO     | chi2: 0.24443024794074325
[2025-12-16 09:07:55] 2025-12-16 15:07:22,220 | INFO     | current chi2=0.24443024794074325 (change=15.968371985878168 %)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,220 | INFO     | left removable region: 20
[2025-12-16 09:07:55] 2025-12-16 15:07:22,220 | INFO     | sum of square deviations: 746051197.5
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | sum of deviations: -26798146436.00001
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | mean x: 1765893170.5
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | mean y: 2398516.9104477614
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | intersect: 63433251428.8399
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | chi2: 0.18417942409572513
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | current memory leak: -35.92 B/s (using 134 data points, chi2=0.18)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | could have reported an average CPU frequency of 4135 MHz (9 samples)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,221 | INFO     | ..............................
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . Timing measurements:
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . get job = 0 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . initial setup = 10 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . payload setup = 17 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . stage-in = 0 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . payload execution = 9735 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . stage-out = 0 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | . log creation = 0 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,222 | INFO     | ..............................
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | 
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | job summary report
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | --------------------------------------------------
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | PanDA job id: 6930760642
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | task id: 47898782
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | errors: (none)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | pilot state: finished 
[2025-12-16 09:07:55] 2025-12-16 15:07:22,274 | INFO     | transexitcode: 0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | exeerrorcode: 0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | exeerrordiag: 
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | exitcode: 0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | exitmsg: OK
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | cpuconsumptiontime: 36333 s
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | nevents: 400
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | neventsw: 0
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | pid: 2035240
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | pgrp: 2035240
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | corecount: 4
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | event service: False
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | sizes: {0: 2283152, 1: 2284015, 5: 2284277, 12: 2284333, 9755: 2312885, 9757: 2322081, 9769: 2322283}
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | --------------------------------------------------
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | 
[2025-12-16 09:07:55] 2025-12-16 15:07:22,275 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | job 6930760642 has completed (purged errors)
[2025-12-16 09:07:55] 2025-12-16 15:07:22,297 | INFO     | overall cleanup function is called
[2025-12-16 09:07:55] 2025-12-16 15:07:23,304 | INFO     | --- collectZombieJob: --- 10, [2035240]
[2025-12-16 09:07:55] 2025-12-16 15:07:23,304 | INFO     | zombie collector waiting for pid 2035240
[2025-12-16 09:07:55] 2025-12-16 15:07:23,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 09:07:55] 2025-12-16 15:07:23,304 | INFO     | collected zombie processes
[2025-12-16 09:07:55] 2025-12-16 15:07:23,305 | INFO     | will attempt to kill all subprocesses of pid=2035240
[2025-12-16 09:07:55] 2025-12-16 15:07:23,390 | INFO     | process IDs to be killed: [2035240] (in reverse order)
[2025-12-16 09:07:55] 2025-12-16 15:07:23,442 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 09:07:55] 2025-12-16 15:07:23,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 09:07:55] 2025-12-16 15:07:23,446 | INFO     | did not find any defunct processes belonging to 2035240
[2025-12-16 09:07:55] 2025-12-16 15:07:23,450 | INFO     | did not find any defunct processes belonging to 2035240
[2025-12-16 09:07:55] 2025-12-16 15:07:23,450 | INFO     | ready for new job
[2025-12-16 09:07:55] 2025-12-16 15:07:23,450 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 09:07:55] 2025-12-16 15:07:23,452 | INFO     | ***************************************
[2025-12-16 09:07:55] 2025-12-16 15:07:23,452 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 09:07:55] 2025-12-16 15:07:23,452 | INFO     | ***************************************
[2025-12-16 09:07:55] 2025-12-16 15:07:23,452 | INFO     | 
[2025-12-16 09:07:55] 2025-12-16 15:07:23,453 | INFO     | architecture information:
[2025-12-16 09:07:55] 2025-12-16 15:07:23,454 | INFO     | executing command: cat /etc/os-release
[2025-12-16 09:07:55] 2025-12-16 15:07:23,468 | INFO     | cat /etc/os-release:
[2025-12-16 09:07:55] NAME="CentOS Linux"
[2025-12-16 09:07:55] VERSION="7 (Core)"
[2025-12-16 09:07:55] ID="centos"
[2025-12-16 09:07:55] ID_LIKE="rhel fedora"
[2025-12-16 09:07:55] VERSION_ID="7"
[2025-12-16 09:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 09:07:55] ANSI_COLOR="0;31"
[2025-12-16 09:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 09:07:55] HOME_URL="https://www.centos.org/"
[2025-12-16 09:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 09:07:55] 
[2025-12-16 09:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 09:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 09:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 09:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 09:07:55] 
[2025-12-16 09:07:55] 2025-12-16 15:07:23,468 | INFO     | ***************************************
[2025-12-16 09:07:55] 2025-12-16 15:07:23,971 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-12-16 09:07:55] 2025-12-16 15:07:23,988 | INFO     | sufficient remaining disk space (678451740672 B)
[2025-12-16 09:07:55] 2025-12-16 15:07:23,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 09:07:55] 2025-12-16 15:07:23,989 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 09:07:55] 2025-12-16 15:07:23,989 | INFO     | update_server=False
[2025-12-16 09:07:55] 2025-12-16 15:07:23,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 09:07:55] 2025-12-16 15:07:23,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 09:07:55] 2025-12-16 15:07:23,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:07:55] 2025-12-16 15:07:24,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:07:55] 2025-12-16 15:07:24,040 | INFO     | aborting loop
[2025-12-16 09:07:55] 2025-12-16 15:07:24,068 | INFO     | all payload control threads have been joined
[2025-12-16 09:07:55] 2025-12-16 15:07:24,672 | INFO     | all data control threads have been joined
[2025-12-16 09:07:55] 2025-12-16 15:07:24,993 | INFO     | [job] retrieve thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:24,994 | INFO     | [job] queue monitor thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,046 | INFO     | [job] job monitor thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,073 | INFO     | [payload] control thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,224 | INFO     | [payload] failed_post thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,415 | INFO     | all job control threads have been joined
[2025-12-16 09:07:55] 2025-12-16 15:07:25,513 | INFO     | [data] copytool_in thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 09:07:55] 2025-12-16 15:07:25,678 | INFO     | [data] control thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,744 | INFO     | [payload] validate_post thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:25,994 | INFO     | [data] copytool_out thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:26,160 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:26,164 | INFO     | [job] validate thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:26,192 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:26,243 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:26,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:26,420 | INFO     | [job] control thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:29,572 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 09:07:55] 2025-12-16 15:07:34,626 | INFO     | [monitor] cgroup control has ended
[2025-12-16 09:07:55] 2025-12-16 15:07:35,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133749284312896)>', '<ExcThread(monitor, started 133748351817472)>']
[2025-12-16 09:07:55] 2025-12-16 15:07:40,700 | INFO     | all workflow threads have been joined
[2025-12-16 09:07:55] 2025-12-16 15:07:40,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 09:07:55] 2025-12-16 15:07:40,700 | INFO     | traces error code: 0
[2025-12-16 09:07:55] 2025-12-16 15:07:40,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 09:07:55] 2025-12-16 15:07:55,014 | INFO     | PID=2028648 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 09:07:55] 2025-12-16 15:07:55,015 | INFO     | .. there are 2 such processes running
[2025-12-16 09:07:55] 2025-12-16 15:07:55,015 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 09:07:55] 2025-12-16 15:07:55,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 09:07:55] 2025-12-16 15:07:55,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 09:07:55] 2025-12-16 15:07:55,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 09:07:55] 2025-12-16 15:07:55,015 | INFO     | [monitor] control thread has ended
[2025-12-16 09:07:55] 2025-12-16 15:07:55,097 [wrapper] ==== pilot stdout END ====
[2025-12-16 09:07:55] 2025-12-16 15:07:55,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 09:07:55] 2025-12-16 15:07:55,103 [wrapper] pilotpid: 2028648
[2025-12-16 09:07:55] 2025-12-16 15:07:55,106 [wrapper] Pilot exit status: 0
[2025-12-16 09:07:55] 2025-12-16 15:07:55,223 [wrapper] pandaids: 6930760642
[2025-12-16 09:07:55] 2025-12-16 15:07:55,253 [wrapper] cleanup supervisor_pilot 2104068 2028649
[2025-12-16 09:07:55] 2025-12-16 15:07:55,260 [wrapper] Test setup, not cleaning
[2025-12-16 09:07:55] 2025-12-16 15:07:55,265 [wrapper] apfmon messages muted
[2025-12-16 09:07:55] 2025-12-16 15:07:55,268 [wrapper] ==== wrapper stdout END ====
[2025-12-16 09:07:55] 2025-12-16 15:07:55,272 [wrapper] ==== wrapper stderr END ====
[2025-12-16 09:07:55]  *** Error codes and diagnostics ***
[2025-12-16 09:07:55]     "exeErrorCode": 0,
[2025-12-16 09:07:55]     "exeErrorDiag": "",
[2025-12-16 09:07:55]     "pilotErrorCode": 0,
[2025-12-16 09:07:55]     "pilotErrorDiag": "",
[2025-12-16 09:07:55]  *** Listing of results directory ***
[2025-12-16 09:07:55] total 410708
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc    579449 Dec 16 00:04 pilot3.tar.gz
[2025-12-16 09:07:55] -rwx------ 1 boinc boinc     36322 Dec 16 00:05 runpilot2-wrapper.sh
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc      5112 Dec 16 00:07 queuedata.json
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc       100 Dec 16 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 09:07:55] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 06:23 run_atlas
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc       105 Dec 16 06:23 job.xml
[2025-12-16 09:07:55] -rw-r--r-- 2 boinc boinc 214745789 Dec 16 06:23 EVNT.47898779._000199.pool.root.1
[2025-12-16 09:07:55] -rw-r--r-- 2 boinc boinc     15847 Dec 16 06:23 start_atlas.sh
[2025-12-16 09:07:55] drwxrwx--x 2 boinc boinc      4096 Dec 16 06:23 shared
[2025-12-16 09:07:55] -rw-r--r-- 2 boinc boinc    592395 Dec 16 06:23 input.tar.gz
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc      9384 Dec 16 06:23 init_data.xml
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc         0 Dec 16 06:23 boinc_setup_complete
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc         0 Dec 16 06:23 boinc_lockfile
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc      2522 Dec 16 06:23 pandaJob.out
[2025-12-16 09:07:55] -rw------- 1 boinc boinc    990993 Dec 16 06:24 agis_schedconf.cvmfs.json
[2025-12-16 09:07:55] -rw------- 1 boinc boinc   1516240 Dec 16 06:24 agis_ddmendpoints.agis.ALL.json
[2025-12-16 09:07:55] drwx------ 5 boinc boinc      4096 Dec 16 06:24 pilot3
[2025-12-16 09:07:55] -rw------- 1 boinc boinc 198391264 Dec 16 09:06 HITS.47898782._004890.pool.root.1
[2025-12-16 09:07:55] -rw------- 1 boinc boinc      1019 Dec 16 09:07 memory_monitor_summary.json
[2025-12-16 09:07:55] -rw------- 1 boinc boinc    338067 Dec 16 09:07 log.47898782._004890.job.log.tgz.1
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc       530 Dec 16 09:07 boinc_task_state.xml
[2025-12-16 09:07:55] -rw------- 1 boinc boinc      7740 Dec 16 09:07 heartbeat.json
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc      8192 Dec 16 09:07 boinc_mmap_file
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc        27 Dec 16 09:07 wrapper_checkpoint.txt
[2025-12-16 09:07:55] -rw------- 1 boinc boinc        95 Dec 16 09:07 pilot_heartbeat.json
[2025-12-16 09:07:55] -rw------- 1 boinc boinc       822 Dec 16 09:07 pilotlog.txt
[2025-12-16 09:07:55] -rw------- 1 boinc boinc   1418945 Dec 16 09:07 log.47898782._004890.job.log.1
[2025-12-16 09:07:55] -rw------- 1 boinc boinc       357 Dec 16 09:07 output.list
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc       620 Dec 16 09:07 runtime_log
[2025-12-16 09:07:55] -rw------- 1 boinc boinc   1771520 Dec 16 09:07 result.tar.gz
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc      8938 Dec 16 09:07 runtime_log.err
[2025-12-16 09:07:55] -rw------- 1 boinc boinc       658 Dec 16 09:07 m6KODmDNdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXBVKDmdhD9Po.diag
[2025-12-16 09:07:55] -rw-r--r-- 1 boinc boinc     21379 Dec 16 09:07 stderr.txt
[2025-12-16 09:07:55] HITS file was successfully produced:
[2025-12-16 09:07:55] -rw------- 1 boinc boinc 198391264 Dec 16 09:06 shared/HITS.pool.root.1
[2025-12-16 09:07:55]  *** Contents of shared directory: ***
[2025-12-16 09:07:55] total 405796
[2025-12-16 09:07:55] -rw-r--r-- 2 boinc boinc 214745789 Dec 16 06:23 ATLAS.root_0
[2025-12-16 09:07:55] -rw-r--r-- 2 boinc boinc     15847 Dec 16 06:23 start_atlas.sh
[2025-12-16 09:07:55] -rw-r--r-- 2 boinc boinc    592395 Dec 16 06:23 input.tar.gz
[2025-12-16 09:07:55] -rw------- 1 boinc boinc 198391264 Dec 16 09:06 HITS.pool.root.1
[2025-12-16 09:07:55] -rw------- 1 boinc boinc   1771520 Dec 16 09:07 result.tar.gz
09:07:56 (2024206): run_atlas exited; CPU time 36351.890193
09:07:56 (2024206): called boinc_finish(0)

</stderr_txt>
]]>

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