Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:52:35 (2046943): wrapper (7.7.26015): starting
06:52:35 (2046943): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 06:52:35] Arguments: --nthreads 4
[2025-12-16 06:52:35] Threads: 4
[2025-12-16 06:52:35] Checking for CVMFS
[2025-12-16 06:52:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 06:52:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 06:52:37] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 06:52:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 06:52:37] 2.12.6.0 2024432 29 44944 154071 2 188 2855630 4194305 923 130560 0 49756 87.380 670557 1630 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-16 06:52:37] CVMFS is ok
[2025-12-16 06:52:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 06:52:37] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-16 06:52:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-16 06:52:37] Further information can be found at the LHC@home message board.
[2025-12-16 06:52:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 06:52:37] Checking for apptainer binary...
[2025-12-16 06:52:37] apptainer is not installed, using version from CVMFS
[2025-12-16 06:52:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 06:52:37] Kthanid-Penguin
[2025-12-16 06:52:37] apptainer works
[2025-12-16 06:52:37] Set ATHENA_PROC_NUMBER=4
[2025-12-16 06:52:37] Set ATHENA_CORE_NUMBER=4
[2025-12-16 06:52:37] Starting ATLAS job with PandaID=6930760637
[2025-12-16 06:52:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 09:30:30]  *** The last 200 lines of the pilot log: ***
[2025-12-16 09:30:30] 2025-12-16 15:29:58,019 | INFO     | .. there are 2 such processes running
[2025-12-16 09:30:30] 2025-12-16 15:29:58,206 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 09:30:30] 2025-12-16 15:29:58,207 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3553.9557499999996
[2025-12-16 09:30:30] 2025-12-16 15:29:58,209 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6930760637/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,210 | INFO     | extracted standard info from prmon json
[2025-12-16 09:30:30] 2025-12-16 15:29:58,210 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 09:30:30] 2025-12-16 15:29:58,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 09:30:30] 2025-12-16 15:29:58,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 09:30:30] 2025-12-16 15:29:58,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 09:30:30] 2025-12-16 15:29:58,212 | INFO     | fitting pss+swap vs Time
[2025-12-16 09:30:30] 2025-12-16 15:29:58,212 | INFO     | sum of square deviations: 1154663510.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,213 | INFO     | sum of deviations: -3856248041.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,213 | INFO     | mean x: 1765894292.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,213 | INFO     | mean y: 2322933.316129032
[2025-12-16 09:30:30] 2025-12-16 15:29:58,213 | INFO     | intersect: 5899908113.034922
[2025-12-16 09:30:30] 2025-12-16 15:29:58,213 | INFO     | chi2: 2.0422309373208813
[2025-12-16 09:30:30] 2025-12-16 15:29:58,213 | INFO     | sum of square deviations: 1046484737.5
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | sum of deviations: 5001173297.499999
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | mean x: 1765894139.5
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | mean y: 2335092.553333333
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | intersect: -8436911367.722097
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | chi2: 1.382475326580811
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | current chi2=1.382475326580811 (change=32.3056319774284 %)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,214 | INFO     | sum of square deviations: 945282840.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | sum of deviations: 4809203521.999998
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | mean x: 1765893987.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | mean y: 2334803.124137931
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | intersect: -8981794837.649855
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | chi2: 1.3833514195778855
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | current chi2=1.3833514195778855 (change=-0.06337132968885384 %)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | right removable region: 144
[2025-12-16 09:30:30] 2025-12-16 15:29:58,215 | INFO     | sum of square deviations: 1046484737.5
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | sum of deviations: -20555002006.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | mean x: 1765894444.5
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | mean y: 2345957.066666667
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | intersect: 34687958224.85357
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | chi2: 0.7505293912574584
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | current chi2=0.7505293912574584 (change=63.2495337553721 %)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,216 | INFO     | sum of square deviations: 945282840.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | sum of deviations: -16817706710.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | mean x: 1765894597.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | mean y: 2340316.496551724
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | intersect: 31419706798.172707
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | chi2: 0.741788881293937
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | current chi2=0.741788881293937 (change=1.1645793043330763 %)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | left removable region: 20
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | sum of square deviations: 591173875.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,217 | INFO     | sum of deviations: -822902200.0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | mean x: 1765894566.5
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | mean y: 2340537.5
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | intersect: 2460430424.744927
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | chi2: 0.015100165575021656
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | current memory leak: -1.39 B/s (using 124 data points, chi2=0.02)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | could have reported an average CPU frequency of 4116 MHz (9 samples)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | ..............................
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | . Timing measurements:
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | . get job = 0 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | . initial setup = 3 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | . payload setup = 4 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,218 | INFO     | . stage-in = 0 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,219 | INFO     | . payload execution = 9398 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,219 | INFO     | . stage-out = 0 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,219 | INFO     | . log creation = 0 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,219 | INFO     | ..............................
[2025-12-16 09:30:30] 2025-12-16 15:29:58,363 | INFO     | 
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | job summary report
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | --------------------------------------------------
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | PanDA job id: 6930760637
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | task id: 47898782
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | errors: (none)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | pilot state: finished 
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | transexitcode: 0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | exeerrorcode: 0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | exeerrordiag: 
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | exitcode: 0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | exitmsg: OK
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | cpuconsumptiontime: 36501 s
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | nevents: 400
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | neventsw: 0
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | pid: 2057532
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | pgrp: 2057532
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | corecount: 4
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | event service: False
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | sizes: {0: 2283987, 4: 2284249, 11: 2284277, 9407: 2321841, 9408: 2321841, 9412: 2322127}
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | --------------------------------------------------
[2025-12-16 09:30:30] 2025-12-16 15:29:58,364 | INFO     | 
[2025-12-16 09:30:30] 2025-12-16 15:29:58,365 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | job 6930760637 has completed (purged errors)
[2025-12-16 09:30:30] 2025-12-16 15:29:58,388 | INFO     | overall cleanup function is called
[2025-12-16 09:30:30] 2025-12-16 15:29:59,395 | INFO     | --- collectZombieJob: --- 10, [2057532]
[2025-12-16 09:30:30] 2025-12-16 15:29:59,396 | INFO     | zombie collector waiting for pid 2057532
[2025-12-16 09:30:30] 2025-12-16 15:29:59,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 09:30:30] 2025-12-16 15:29:59,396 | INFO     | collected zombie processes
[2025-12-16 09:30:30] 2025-12-16 15:29:59,396 | INFO     | will attempt to kill all subprocesses of pid=2057532
[2025-12-16 09:30:30] 2025-12-16 15:29:59,495 | INFO     | process IDs to be killed: [2057532] (in reverse order)
[2025-12-16 09:30:30] 2025-12-16 15:29:59,553 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 09:30:30] 2025-12-16 15:29:59,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 09:30:30] 2025-12-16 15:29:59,557 | INFO     | did not find any defunct processes belonging to 2057532
[2025-12-16 09:30:30] 2025-12-16 15:29:59,560 | INFO     | did not find any defunct processes belonging to 2057532
[2025-12-16 09:30:30] 2025-12-16 15:29:59,560 | INFO     | ready for new job
[2025-12-16 09:30:30] 2025-12-16 15:29:59,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 09:30:30] 2025-12-16 15:29:59,562 | INFO     | ***************************************
[2025-12-16 09:30:30] 2025-12-16 15:29:59,562 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 09:30:30] 2025-12-16 15:29:59,562 | INFO     | ***************************************
[2025-12-16 09:30:30] 2025-12-16 15:29:59,562 | INFO     | 
[2025-12-16 09:30:30] 2025-12-16 15:29:59,563 | INFO     | architecture information:
[2025-12-16 09:30:30] 2025-12-16 15:29:59,563 | INFO     | executing command: cat /etc/os-release
[2025-12-16 09:30:30] 2025-12-16 15:29:59,581 | INFO     | cat /etc/os-release:
[2025-12-16 09:30:30] NAME="CentOS Linux"
[2025-12-16 09:30:30] VERSION="7 (Core)"
[2025-12-16 09:30:30] ID="centos"
[2025-12-16 09:30:30] ID_LIKE="rhel fedora"
[2025-12-16 09:30:30] VERSION_ID="7"
[2025-12-16 09:30:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 09:30:30] ANSI_COLOR="0;31"
[2025-12-16 09:30:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 09:30:30] HOME_URL="https://www.centos.org/"
[2025-12-16 09:30:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 09:30:30] 
[2025-12-16 09:30:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 09:30:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 09:30:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 09:30:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 09:30:30] 
[2025-12-16 09:30:30] 2025-12-16 15:29:59,582 | INFO     | ***************************************
[2025-12-16 09:30:30] 2025-12-16 15:30:00,084 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | INFO     | sufficient remaining disk space (678558695424 B)
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | INFO     | update_server=False
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:30:30] 2025-12-16 15:30:00,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 09:30:30] 2025-12-16 15:30:00,117 | INFO     | all payload control threads have been joined
[2025-12-16 09:30:30] 2025-12-16 15:30:00,187 | INFO     | all data control threads have been joined
[2025-12-16 09:30:30] 2025-12-16 15:30:00,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 09:30:30] 2025-12-16 15:30:00,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 09:30:30] 2025-12-16 15:30:00,465 | INFO     | aborting loop
[2025-12-16 09:30:30] 2025-12-16 15:30:01,109 | INFO     | [job] retrieve thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,111 | INFO     | [job] queue monitor thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,124 | INFO     | [payload] control thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,191 | INFO     | [data] control thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,421 | INFO     | all job control threads have been joined
[2025-12-16 09:30:30] 2025-12-16 15:30:01,447 | INFO     | [data] copytool_in thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,471 | INFO     | [job] job monitor thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,745 | INFO     | [payload] failed_post thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:01,870 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:02,109 | INFO     | [data] copytool_out thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:02,114 | INFO     | [job] validate thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:02,373 | INFO     | [payload] validate_post thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:02,413 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:02,426 | INFO     | [job] control thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:02,486 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:04,252 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:07,620 | INFO     | [monitor] cgroup control has ended
[2025-12-16 09:30:30] 2025-12-16 15:30:10,232 | INFO     | job.realtimelogging is not enabled
[2025-12-16 09:30:30] 2025-12-16 15:30:11,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 09:30:30] 2025-12-16 15:30:11,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662426261312)>', '<ExcThread(monitor, started 139661464827648)>']
[2025-12-16 09:30:30] 2025-12-16 15:30:16,498 | INFO     | all workflow threads have been joined
[2025-12-16 09:30:30] 2025-12-16 15:30:16,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 09:30:30] 2025-12-16 15:30:16,499 | INFO     | traces error code: 0
[2025-12-16 09:30:30] 2025-12-16 15:30:16,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 09:30:30] 2025-12-16 15:30:30,224 | INFO     | PID=2051028 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 09:30:30] 2025-12-16 15:30:30,224 | INFO     | .. there are 2 such processes running
[2025-12-16 09:30:30] 2025-12-16 15:30:30,224 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 09:30:30] 2025-12-16 15:30:30,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 09:30:30] 2025-12-16 15:30:30,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 09:30:30] 2025-12-16 15:30:30,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 09:30:30] 2025-12-16 15:30:30,225 | INFO     | [monitor] control thread has ended
[2025-12-16 09:30:30] 2025-12-16 15:30:30,330 [wrapper] ==== pilot stdout END ====
[2025-12-16 09:30:30] 2025-12-16 15:30:30,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 09:30:30] 2025-12-16 15:30:30,339 [wrapper] pilotpid: 2051028
[2025-12-16 09:30:30] 2025-12-16 15:30:30,342 [wrapper] Pilot exit status: 0
[2025-12-16 09:30:30] 2025-12-16 15:30:30,352 [wrapper] pandaids: 6930760637
[2025-12-16 09:30:30] 2025-12-16 15:30:30,383 [wrapper] cleanup supervisor_pilot 2132789 2051029
[2025-12-16 09:30:30] 2025-12-16 15:30:30,389 [wrapper] Test setup, not cleaning
[2025-12-16 09:30:30] 2025-12-16 15:30:30,392 [wrapper] apfmon messages muted
[2025-12-16 09:30:30] 2025-12-16 15:30:30,395 [wrapper] ==== wrapper stdout END ====
[2025-12-16 09:30:30] 2025-12-16 15:30:30,398 [wrapper] ==== wrapper stderr END ====
[2025-12-16 09:30:30]  *** Error codes and diagnostics ***
[2025-12-16 09:30:30]     "exeErrorCode": 0,
[2025-12-16 09:30:30]     "exeErrorDiag": "",
[2025-12-16 09:30:30]     "pilotErrorCode": 0,
[2025-12-16 09:30:30]     "pilotErrorDiag": "",
[2025-12-16 09:30:30]  *** Listing of results directory ***
[2025-12-16 09:30:30] total 412816
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc    579449 Dec 16 00:04 pilot3.tar.gz
[2025-12-16 09:30:30] -rwx------ 1 boinc boinc     36322 Dec 16 00:05 runpilot2-wrapper.sh
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc      5112 Dec 16 00:07 queuedata.json
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc       100 Dec 16 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 09:30:30] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 06:52 run_atlas
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc       105 Dec 16 06:52 job.xml
[2025-12-16 09:30:30] -rw-r--r-- 2 boinc boinc 214745789 Dec 16 06:52 EVNT.47898779._000199.pool.root.1
[2025-12-16 09:30:30] -rw-r--r-- 2 boinc boinc     15847 Dec 16 06:52 start_atlas.sh
[2025-12-16 09:30:30] drwxrwx--x 2 boinc boinc      4096 Dec 16 06:52 shared
[2025-12-16 09:30:30] -rw-r--r-- 2 boinc boinc    592395 Dec 16 06:52 input.tar.gz
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc      9384 Dec 16 06:52 init_data.xml
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc         0 Dec 16 06:52 boinc_setup_complete
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc         0 Dec 16 06:52 boinc_lockfile
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc      2522 Dec 16 06:52 pandaJob.out
[2025-12-16 09:30:30] -rw------- 1 boinc boinc    990993 Dec 16 06:52 agis_schedconf.cvmfs.json
[2025-12-16 09:30:30] -rw------- 1 boinc boinc   1516240 Dec 16 06:52 agis_ddmendpoints.agis.ALL.json
[2025-12-16 09:30:30] drwx------ 5 boinc boinc      4096 Dec 16 06:52 pilot3
[2025-12-16 09:30:30] -rw------- 1 boinc boinc 200662757 Dec 16 09:29 HITS.47898782._004885.pool.root.1
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc       529 Dec 16 09:29 boinc_task_state.xml
[2025-12-16 09:30:30] -rw------- 1 boinc boinc      1015 Dec 16 09:29 memory_monitor_summary.json
[2025-12-16 09:30:30] -rw------- 1 boinc boinc    327315 Dec 16 09:29 log.47898782._004885.job.log.tgz.1
[2025-12-16 09:30:30] -rw------- 1 boinc boinc      7735 Dec 16 09:29 heartbeat.json
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc      8192 Dec 16 09:30 boinc_mmap_file
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc        27 Dec 16 09:30 wrapper_checkpoint.txt
[2025-12-16 09:30:30] -rw------- 1 boinc boinc       822 Dec 16 09:30 pilotlog.txt
[2025-12-16 09:30:30] -rw------- 1 boinc boinc        95 Dec 16 09:30 pilot_heartbeat.json
[2025-12-16 09:30:30] -rw------- 1 boinc boinc   1373415 Dec 16 09:30 log.47898782._004885.job.log.1
[2025-12-16 09:30:30] -rw------- 1 boinc boinc       357 Dec 16 09:30 output.list
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc       620 Dec 16 09:30 runtime_log
[2025-12-16 09:30:30] -rw------- 1 boinc boinc   1720320 Dec 16 09:30 result.tar.gz
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc      8938 Dec 16 09:30 runtime_log.err
[2025-12-16 09:30:30] -rw------- 1 boinc boinc       657 Dec 16 09:30 oZFODmDNdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUBVKDmQuh0Po.diag
[2025-12-16 09:30:30] -rw-r--r-- 1 boinc boinc     21097 Dec 16 09:30 stderr.txt
[2025-12-16 09:30:30] HITS file was successfully produced:
[2025-12-16 09:30:30] -rw------- 1 boinc boinc 200662757 Dec 16 09:29 shared/HITS.pool.root.1
[2025-12-16 09:30:30]  *** Contents of shared directory: ***
[2025-12-16 09:30:30] total 407960
[2025-12-16 09:30:30] -rw-r--r-- 2 boinc boinc 214745789 Dec 16 06:52 ATLAS.root_0
[2025-12-16 09:30:30] -rw-r--r-- 2 boinc boinc     15847 Dec 16 06:52 start_atlas.sh
[2025-12-16 09:30:30] -rw-r--r-- 2 boinc boinc    592395 Dec 16 06:52 input.tar.gz
[2025-12-16 09:30:30] -rw------- 1 boinc boinc 200662757 Dec 16 09:29 HITS.pool.root.1
[2025-12-16 09:30:30] -rw------- 1 boinc boinc   1720320 Dec 16 09:30 result.tar.gz
09:30:31 (2046943): run_atlas exited; CPU time 36515.654709
09:30:31 (2046943): called boinc_finish(0)

</stderr_txt>
]]>

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