Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:57:19 (1281428): wrapper (7.7.26015): starting
03:57:19 (1281428): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 03:57:19] Arguments: --nthreads 8
[2025-12-16 03:57:19] Threads: 8
[2025-12-16 03:57:19] Checking for CVMFS
[2025-12-16 03:57:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 03:57:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 03:57:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 03:57:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 03:57:21] 2.11.3.0 756893 57154 241792 154069 1 614 32016098 45568000 7960 130560 0 354757306 99.787 232925547 25165 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-16 03:57:21] CVMFS is ok
[2025-12-16 03:57:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 03:57:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 03:57:21] Further information can be found at the LHC@home message board.
[2025-12-16 03:57:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 03:57:21] Checking for apptainer binary...
[2025-12-16 03:57:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 03:57:21] Running /usr/bin/apptainer --version
[2025-12-16 03:57:22] apptainer version 1.4.1-1.el9
[2025-12-16 03:57:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 03:57:23] wns0012.triumf.lcg
[2025-12-16 03:57:23] apptainer works
[2025-12-16 03:57:23] Set ATHENA_PROC_NUMBER=8
[2025-12-16 03:57:23] Set ATHENA_CORE_NUMBER=8
[2025-12-16 03:57:23] Starting ATLAS job with PandaID=6930760684
[2025-12-16 03:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 04:03:31]  *** The last 200 lines of the pilot log: ***
[2025-12-16 04:03:31] 2025-12-16 12:02:57,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | WARNING  | wrong length of table data, x=[1765886407.0], y=[1570.0] (must be same and length>=4)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | ..............................
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . Timing measurements:
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . get job = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . initial setup = 6 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . payload setup = 32 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . stage-in = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . payload execution = 44 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . stage-out = 1 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . log creation = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | ..............................
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930760684/pilotlog.txt
[2025-12-16 04:03:31] 2025-12-16 12:02:57,938 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 04:03:31] - Log from pilotlog.txt -
[2025-12-16 04:03:31] 2025-12-16 12:02:57,864 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930760684/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | INFO     | extracted standard info from prmon json
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:03:31] 2025-12-16 12:02:57,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | WARNING  | wrong length of table data, x=[1765886407.0], y=[1570.0] (must be same and length>=4)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | ..............................
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . Timing measurements:
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . get job = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . initial setup = 6 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . payload setup = 32 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . stage-in = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . payload execution = 44 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . stage-out = 1 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . log creation = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | ..............................
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930760684/pilotlog.txt
[2025-12-16 04:03:31] 2025-12-16 12:02:57,939 | WARNING  | 
[2025-12-16 04:03:31] [begin log extracts]
[2025-12-16 04:03:31] - Log from pilotlog.txt -
[2025-12-16 04:03:31] 2025-12-16 12:02:57,864 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6930760684/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | INFO     | extracted standard info from prmon json
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:03:31] 2025-12-16 12:02:57,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:03:31] 2025-12-16 12:02:57,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | WARNING  | wrong length of table data, x=[1765886407.0], y=[1570.0] (must be same and length>=4)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | ..............................
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . Timing measurements:
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . get job = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . initial setup = 6 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . payload setup = 32 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,874 | INFO     | . stage-in = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . payload execution = 44 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . stage-out = 1 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | . log creation = 0 s
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | ..............................
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 04:03:31] 2025-12-16 12:02:57,875 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6930760684/pilotlog.txt
[2025-12-16 04:03:31] [end log extracts]
[2025-12-16 04:03:31] 2025-12-16 12:02:57,939 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 04:03:31] 2025-12-16 12:02:57,940 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 04:03:31] 2025-12-16 12:02:58,240 | INFO     | 
[2025-12-16 04:03:31] 2025-12-16 12:02:58,240 | INFO     | job summary report
[2025-12-16 04:03:31] 2025-12-16 12:02:58,240 | INFO     | --------------------------------------------------
[2025-12-16 04:03:31] 2025-12-16 12:02:58,240 | INFO     | PanDA job id: 6930760684
[2025-12-16 04:03:31] 2025-12-16 12:02:58,240 | INFO     | task id: 47898782
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 04:00:27,255 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | pilot state: failed 
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | transexitcode: 65
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | exeerrorcode: 65
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | exitcode: 65
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | cpuconsumptiontime: 17 s
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | nevents: 0
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | neventsw: 0
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | pid: 1291917
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | pgrp: 1291917
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | corecount: 8
[2025-12-16 04:03:31] 2025-12-16 12:02:58,241 | INFO     | event service: False
[2025-12-16 04:03:31] 2025-12-16 12:02:58,242 | INFO     | sizes: {0: 2283150, 1: 2283748, 2: 2283860, 3: 2283860, 4: 2284087, 15: 2284087, 26: 2284243, 29: 2284533, 37: 2284561, 81: 2307975, 82: 2307951, 84: 2312579, 87: 
[2025-12-16 04:03:31] 2025-12-16 12:02:58,242 | INFO     | --------------------------------------------------
[2025-12-16 04:03:31] 2025-12-16 12:02:58,242 | INFO     | 
[2025-12-16 04:03:31] 2025-12-16 12:02:58,242 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 04:03:31] 2025-12-16 12:02:58,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 04:03:31] 2025-12-16 12:02:58,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 04:03:31] 2025-12-16 12:02:58,282 | INFO     | job 6930760684 has completed (purged errors)
[2025-12-16 04:03:31] 2025-12-16 12:02:58,282 | INFO     | overall cleanup function is called
[2025-12-16 04:03:31] 2025-12-16 12:02:59,315 | INFO     | --- collectZombieJob: --- 10, [1291917]
[2025-12-16 04:03:31] 2025-12-16 12:02:59,315 | INFO     | zombie collector waiting for pid 1291917
[2025-12-16 04:03:31] 2025-12-16 12:02:59,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 04:03:31] 2025-12-16 12:02:59,315 | INFO     | collected zombie processes
[2025-12-16 04:03:31] 2025-12-16 12:02:59,315 | INFO     | will attempt to kill all subprocesses of pid=1291917
[2025-12-16 04:03:31] 2025-12-16 12:02:59,491 | INFO     | process IDs to be killed: [1291917] (in reverse order)
[2025-12-16 04:03:31] 2025-12-16 12:02:59,547 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 04:03:31] 2025-12-16 12:02:59,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 04:03:31] 2025-12-16 12:02:59,553 | INFO     | did not find any defunct processes belonging to 1291917
[2025-12-16 04:03:31] 2025-12-16 12:02:59,559 | INFO     | did not find any defunct processes belonging to 1291917
[2025-12-16 04:03:31] 2025-12-16 12:02:59,559 | INFO     | ready for new job
[2025-12-16 04:03:31] 2025-12-16 12:02:59,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 04:03:31] 2025-12-16 12:02:59,561 | INFO     | ***************************************
[2025-12-16 04:03:31] 2025-12-16 12:02:59,561 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 04:03:31] 2025-12-16 12:02:59,561 | INFO     | ***************************************
[2025-12-16 04:03:31] 2025-12-16 12:02:59,561 | INFO     | 
[2025-12-16 04:03:31] 2025-12-16 12:02:59,562 | INFO     | architecture information:
[2025-12-16 04:03:31] 2025-12-16 12:02:59,563 | INFO     | executing command: cat /etc/os-release
[2025-12-16 04:03:31] 2025-12-16 12:02:59,574 | INFO     | cat /etc/os-release:
[2025-12-16 04:03:31] NAME="CentOS Linux"
[2025-12-16 04:03:31] VERSION="7 (Core)"
[2025-12-16 04:03:31] ID="centos"
[2025-12-16 04:03:31] ID_LIKE="rhel fedora"
[2025-12-16 04:03:31] VERSION_ID="7"
[2025-12-16 04:03:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 04:03:31] ANSI_COLOR="0;31"
[2025-12-16 04:03:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 04:03:31] HOME_URL="https://www.centos.org/"
[2025-12-16 04:03:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 04:03:31] 
[2025-12-16 04:03:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 04:03:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 04:03:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 04:03:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 04:03:31] 
[2025-12-16 04:03:31] 2025-12-16 12:02:59,574 | INFO     | ***************************************
[2025-12-16 04:03:31] 2025-12-16 12:03:00,077 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 04:03:31] 2025-12-16 12:03:00,104 | INFO     | sufficient remaining disk space (1382453084160 B)
[2025-12-16 04:03:31] 2025-12-16 12:03:00,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 04:03:31] 2025-12-16 12:03:00,105 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 04:03:31] 2025-12-16 12:03:00,105 | INFO     | update_server=False
[2025-12-16 04:03:31] 2025-12-16 12:03:00,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 04:03:31] 2025-12-16 12:03:00,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 04:03:31] 2025-12-16 12:03:00,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:03:31] 2025-12-16 12:03:00,127 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 04:03:31] 2025-12-16 12:03:00,127 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 04:03:31] 2025-12-16 12:03:00,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:03:31] 2025-12-16 12:03:00,127 | INFO     | will abort loop
[2025-12-16 04:03:31] 2025-12-16 12:03:00,399 | INFO     | all data control threads have been joined
[2025-12-16 04:03:31] 2025-12-16 12:03:00,442 | INFO     | all job control threads have been joined
[2025-12-16 04:03:31] 2025-12-16 12:03:01,110 | INFO     | [job] retrieve thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,113 | INFO     | [job] queue monitor thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,132 | INFO     | [job] job monitor thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,353 | INFO     | all payload control threads have been joined
[2025-12-16 04:03:31] 2025-12-16 12:03:01,405 | INFO     | [data] control thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,447 | INFO     | [job] control thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,625 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,641 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 04:03:31] 2025-12-16 12:03:01,778 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,792 | INFO     | [payload] validate_post thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:01,793 | INFO     | [payload] failed_post thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:02,114 | INFO     | [data] copytool_out thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:02,208 | INFO     | [data] copytool_in thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:02,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:02,226 | INFO     | [job] validate thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:02,359 | INFO     | [payload] control thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:03,935 | INFO     | [monitor] cgroup control has ended
[2025-12-16 04:03:31] 2025-12-16 12:03:05,738 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 04:03:31] 2025-12-16 12:03:07,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139769427064640)>', '<ExcThread(monitor, started 139768369248000)>']
[2025-12-16 04:03:31] 2025-12-16 12:03:12,434 | INFO     | all workflow threads have been joined
[2025-12-16 04:03:31] 2025-12-16 12:03:12,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 04:03:31] 2025-12-16 12:03:12,434 | INFO     | traces error code: 0
[2025-12-16 04:03:31] 2025-12-16 12:03:12,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 04:03:31] 2025-12-16 12:03:30,825 | INFO     | PID=1285157 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 04:03:31] 2025-12-16 12:03:30,825 | INFO     | .. there are 19 such processes running
[2025-12-16 04:03:31] 2025-12-16 12:03:30,827 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 04:03:31] 2025-12-16 12:03:30,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 04:03:31] 2025-12-16 12:03:30,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 04:03:31] 2025-12-16 12:03:30,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 04:03:31] 2025-12-16 12:03:30,827 | INFO     | [monitor] control thread has ended
[2025-12-16 04:03:31] 2025-12-16 12:03:30,955 [wrapper] ==== pilot stdout END ====
[2025-12-16 04:03:31] 2025-12-16 12:03:30,973 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 04:03:31] 2025-12-16 12:03:30,988 [wrapper] pilotpid: 1285157
[2025-12-16 04:03:31] 2025-12-16 12:03:31,030 [wrapper] Pilot exit status: 0
[2025-12-16 04:03:31] 2025-12-16 12:03:31,136 [wrapper] pandaids: 6930760684
[2025-12-16 04:03:31] 2025-12-16 12:03:31,182 [wrapper] cleanup supervisor_pilot 1285163 1285158
[2025-12-16 04:03:31] 2025-12-16 12:03:31,196 [wrapper] Test setup, not cleaning
[2025-12-16 04:03:31] 2025-12-16 12:03:31,198 [wrapper] apfmon messages muted
[2025-12-16 04:03:31] 2025-12-16 12:03:31,200 [wrapper] ==== wrapper stdout END ====
[2025-12-16 04:03:31] 2025-12-16 12:03:31,202 [wrapper] ==== wrapper stderr END ====
[2025-12-16 04:03:31]  *** Error codes and diagnostics ***
[2025-12-16 04:03:31]     "exeErrorCode": 65,
[2025-12-16 04:03:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 04:03:31]     "pilotErrorCode": 1305,
[2025-12-16 04:03:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 04:03:31]  *** Listing of results directory ***
[2025-12-16 04:03:31] total 214004
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc    579449 Dec 15 22:04 pilot3.tar.gz
[2025-12-16 04:03:31] -rwx------. 1 boinc boinc     36322 Dec 15 22:05 runpilot2-wrapper.sh
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc      5112 Dec 15 22:07 queuedata.json
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc       100 Dec 16 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 04:03:31] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 03:57 run_atlas
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc       105 Dec 16 03:57 job.xml
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc      6446 Dec 16 03:57 init_data.xml
[2025-12-16 04:03:31] -rw-r--r--. 2 boinc boinc 214989246 Dec 16 03:57 EVNT.47898779._000201.pool.root.1
[2025-12-16 04:03:31] -rw-r--r--. 2 boinc boinc     15847 Dec 16 03:57 start_atlas.sh
[2025-12-16 04:03:31] drwxrwx--x. 2 boinc boinc      4096 Dec 16 03:57 shared
[2025-12-16 04:03:31] -rw-r--r--. 2 boinc boinc    592386 Dec 16 03:57 input.tar.gz
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc         0 Dec 16 03:57 boinc_lockfile
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc      2521 Dec 16 03:57 pandaJob.out
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc    991017 Dec 16 03:58 agis_schedconf.cvmfs.json
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc   1516240 Dec 16 03:58 agis_ddmendpoints.agis.ALL.json
[2025-12-16 04:03:31] drwx------. 5 boinc boinc      4096 Dec 16 03:58 pilot3
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc       964 Dec 16 04:00 memory_monitor_summary.json
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc       524 Dec 16 04:00 boinc_task_state.xml
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc     22701 Dec 16 04:00 log.47898782._004932.job.log.tgz.1
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc      8406 Dec 16 04:02 heartbeat.json
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc      8192 Dec 16 04:03 boinc_mmap_file
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc        22 Dec 16 04:03 wrapper_checkpoint.txt
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc        95 Dec 16 04:03 pilot_heartbeat.json
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc       823 Dec 16 04:03 pilotlog.txt
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc     97019 Dec 16 04:03 log.47898782._004932.job.log.1
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc       188 Dec 16 04:03 output.list
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc       620 Dec 16 04:03 runtime_log
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc    143360 Dec 16 04:03 result.tar.gz
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc      8634 Dec 16 04:03 runtime_log.err
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc       644 Dec 16 04:03 PE1LDmFNdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8ZZKDmr5uhzn.diag
[2025-12-16 04:03:31] -rw-r--r--. 1 boinc boinc     21868 Dec 16 04:03 stderr.txt
[2025-12-16 04:03:31] No HITS result produced
[2025-12-16 04:03:31]  *** Contents of shared directory: ***
[2025-12-16 04:03:31] total 210692
[2025-12-16 04:03:31] -rw-r--r--. 2 boinc boinc 214989246 Dec 16 03:57 ATLAS.root_0
[2025-12-16 04:03:31] -rw-r--r--. 2 boinc boinc     15847 Dec 16 03:57 start_atlas.sh
[2025-12-16 04:03:31] -rw-r--r--. 2 boinc boinc    592386 Dec 16 03:57 input.tar.gz
[2025-12-16 04:03:31] -rw-------. 1 boinc boinc    143360 Dec 16 04:03 result.tar.gz
04:03:33 (1281428): run_atlas exited; CPU time 29.801699
04:03:33 (1281428): called boinc_finish(0)

</stderr_txt>
]]>

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