Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:19:43 (28186): wrapper (7.7.26015): starting
06:19:43 (28186): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 06:19:43] Arguments: --nthreads 8
[2025-12-16 06:19:43] Threads: 8
[2025-12-16 06:19:43] Checking for CVMFS
[2025-12-16 06:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 06:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 06:19:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 06:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 06:19:43] 2.11.2.0 26213 94338 83104 154069 0 56 15399977 20275201 1 130560 0 25257643 99.843 5831702 32197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 06:19:43] CVMFS is ok
[2025-12-16 06:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 06:19:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 06:19:43] Further information can be found at the LHC@home message board.
[2025-12-16 06:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 06:19:43] Checking for apptainer binary...
[2025-12-16 06:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 06:19:43] Running /usr/bin/apptainer --version
[2025-12-16 06:19:43] apptainer version 1.3.2-1.el7
[2025-12-16 06:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 06:19:45] c-115-4.aglt2.org
[2025-12-16 06:19:45] apptainer works
[2025-12-16 06:19:45] Set ATHENA_PROC_NUMBER=8
[2025-12-16 06:19:45] Set ATHENA_CORE_NUMBER=8
[2025-12-16 06:19:45] Starting ATLAS job with PandaID=6930760068
[2025-12-16 06:19:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 08:24:21]  *** The last 200 lines of the pilot log: ***
[2025-12-16 08:24:21] 2025-12-16 13:23:23,588 | INFO     | time since job start (7401s) is within the limit (174528.0s)
[2025-12-16 08:24:21] 2025-12-16 13:23:24,621 | INFO     | monitor loop #549: job 0:6930760068 is in state 'finished'
[2025-12-16 08:24:21] 2025-12-16 13:23:24,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 08:24:21] 2025-12-16 13:23:25,594 | INFO     | time since job start (7403s) is within the limit (174528.0s)
[2025-12-16 08:24:21] 2025-12-16 13:23:26,725 | INFO     | PID=31946 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 08:24:21] 2025-12-16 13:23:27,125 | INFO     | monitor loop #550: job 0:6930760068 is in state 'finished'
[2025-12-16 08:24:21] 2025-12-16 13:23:27,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,415 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 08:24:21] 2025-12-16 13:23:27,418 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1862.25
[2025-12-16 08:24:21] 2025-12-16 13:23:27,420 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930760068/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,421 | INFO     | extracted standard info from prmon json
[2025-12-16 08:24:21] 2025-12-16 13:23:27,421 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 08:24:21] 2025-12-16 13:23:27,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 08:24:21] 2025-12-16 13:23:27,422 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 08:24:21] 2025-12-16 13:23:27,422 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 08:24:21] 2025-12-16 13:23:27,424 | INFO     | fitting pss+swap vs Time
[2025-12-16 08:24:21] 2025-12-16 13:23:27,425 | INFO     | sum of square deviations: 549294020.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,425 | INFO     | sum of deviations: -8397778622.000002
[2025-12-16 08:24:21] 2025-12-16 13:23:27,425 | INFO     | mean x: 1765887693.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,425 | INFO     | mean y: 2566216.0495867766
[2025-12-16 08:24:21] 2025-12-16 13:23:27,426 | INFO     | intersect: 27000009073.93525
[2025-12-16 08:24:21] 2025-12-16 13:23:27,426 | INFO     | chi2: 1.5415187217324196
[2025-12-16 08:24:21] 2025-12-16 13:23:27,426 | INFO     | sum of square deviations: 483971865.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,427 | INFO     | sum of deviations: -7248946406.999999
[2025-12-16 08:24:21] 2025-12-16 13:23:27,427 | INFO     | mean x: 1765887540.5
[2025-12-16 08:24:21] 2025-12-16 13:23:27,427 | INFO     | mean y: 2568899.6379310344
[2025-12-16 08:24:21] 2025-12-16 13:23:27,427 | INFO     | intersect: 26452090178.883244
[2025-12-16 08:24:21] 2025-12-16 13:23:27,427 | INFO     | chi2: 1.5422333361307332
[2025-12-16 08:24:21] 2025-12-16 13:23:27,427 | INFO     | current chi2=1.5422333361307332 (change=-0.04635781507152571 %)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,428 | INFO     | right removable region: 115
[2025-12-16 08:24:21] 2025-12-16 13:23:27,428 | INFO     | sum of square deviations: 483971865.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,428 | INFO     | sum of deviations: -25994516545.500004
[2025-12-16 08:24:21] 2025-12-16 13:23:27,428 | INFO     | mean x: 1765887845.5
[2025-12-16 08:24:21] 2025-12-16 13:23:27,429 | INFO     | mean y: 2606500.3017241377
[2025-12-16 08:24:21] 2025-12-16 13:23:27,429 | INFO     | intersect: 94849857212.58664
[2025-12-16 08:24:21] 2025-12-16 13:23:27,429 | INFO     | chi2: 0.10751154223509936
[2025-12-16 08:24:21] 2025-12-16 13:23:27,429 | INFO     | current chi2=0.10751154223509936 (change=93.02560904908935 %)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,429 | INFO     | sum of square deviations: 424045160.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,430 | INFO     | sum of deviations: -23785209853.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,430 | INFO     | mean x: 1765887998.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,430 | INFO     | mean y: 2600857.4954954954
[2025-12-16 08:24:21] 2025-12-16 13:23:27,430 | INFO     | intersect: 99053410939.43121
[2025-12-16 08:24:21] 2025-12-16 13:23:27,430 | INFO     | chi2: 0.10496544336067477
[2025-12-16 08:24:21] 2025-12-16 13:23:27,430 | INFO     | current chi2=0.10496544336067477 (change=2.3682097954254426 %)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,431 | INFO     | left removable region: 20
[2025-12-16 08:24:21] 2025-12-16 13:23:27,431 | INFO     | sum of square deviations: 265828240.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,431 | INFO     | sum of deviations: -16502694048.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,431 | INFO     | mean x: 1765888120.0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,431 | INFO     | mean y: 2588904.4
[2025-12-16 08:24:21] 2025-12-16 13:23:27,432 | INFO     | intersect: 109629434296.58974
[2025-12-16 08:24:21] 2025-12-16 13:23:27,432 | INFO     | chi2: 0.09697823015260057
[2025-12-16 08:24:21] 2025-12-16 13:23:27,432 | INFO     | current memory leak: -62.08 B/s (using 95 data points, chi2=0.10)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,432 | INFO     | could have reported an average CPU frequency of 2136 MHz (8 samples)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,432 | INFO     | ..............................
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . Timing measurements:
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . get job = 0 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . initial setup = 2 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . payload setup = 8 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . stage-in = 0 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . payload execution = 7366 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . stage-out = 0 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | . log creation = 0 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,433 | INFO     | ..............................
[2025-12-16 08:24:21] 2025-12-16 13:23:27,516 | INFO     | 
[2025-12-16 08:24:21] 2025-12-16 13:23:27,517 | INFO     | job summary report
[2025-12-16 08:24:21] 2025-12-16 13:23:27,517 | INFO     | --------------------------------------------------
[2025-12-16 08:24:21] 2025-12-16 13:23:27,517 | INFO     | PanDA job id: 6930760068
[2025-12-16 08:24:21] 2025-12-16 13:23:27,517 | INFO     | task id: 47886831
[2025-12-16 08:24:21] 2025-12-16 13:23:27,517 | INFO     | errors: (none)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 08:24:21] 2025-12-16 13:23:27,518 | INFO     | pilot state: finished 
[2025-12-16 08:24:21] 2025-12-16 13:23:27,518 | INFO     | transexitcode: 0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,518 | INFO     | exeerrorcode: 0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,518 | INFO     | exeerrordiag: 
[2025-12-16 08:24:21] 2025-12-16 13:23:27,518 | INFO     | exitcode: 0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,519 | INFO     | exitmsg: OK
[2025-12-16 08:24:21] 2025-12-16 13:23:27,519 | INFO     | cpuconsumptiontime: 55076 s
[2025-12-16 08:24:21] 2025-12-16 13:23:27,519 | INFO     | nevents: 400
[2025-12-16 08:24:21] 2025-12-16 13:23:27,519 | INFO     | neventsw: 0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,519 | INFO     | pid: 7263
[2025-12-16 08:24:21] 2025-12-16 13:23:27,519 | INFO     | pgrp: 7263
[2025-12-16 08:24:21] 2025-12-16 13:23:27,520 | INFO     | corecount: 8
[2025-12-16 08:24:21] 2025-12-16 13:23:27,520 | INFO     | event service: False
[2025-12-16 08:24:21] 2025-12-16 13:23:27,520 | INFO     | sizes: {0: 2283993, 6: 2284255, 11: 2284283, 7378: 2311635, 7380: 2320633, 7382: 2320689, 7388: 2321011}
[2025-12-16 08:24:21] 2025-12-16 13:23:27,520 | INFO     | --------------------------------------------------
[2025-12-16 08:24:21] 2025-12-16 13:23:27,520 | INFO     | 
[2025-12-16 08:24:21] 2025-12-16 13:23:27,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 08:24:21] 2025-12-16 13:23:27,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 08:24:21] 2025-12-16 13:23:27,553 | INFO     | job 6930760068 has completed (purged errors)
[2025-12-16 08:24:21] 2025-12-16 13:23:27,553 | INFO     | overall cleanup function is called
[2025-12-16 08:24:21] 2025-12-16 13:23:28,557 | INFO     | --- collectZombieJob: --- 10, [7263]
[2025-12-16 08:24:21] 2025-12-16 13:23:28,558 | INFO     | zombie collector waiting for pid 7263
[2025-12-16 08:24:21] 2025-12-16 13:23:28,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 08:24:21] 2025-12-16 13:23:28,558 | INFO     | collected zombie processes
[2025-12-16 08:24:21] 2025-12-16 13:23:28,558 | INFO     | will attempt to kill all subprocesses of pid=7263
[2025-12-16 08:24:21] 2025-12-16 13:23:28,643 | INFO     | process IDs to be killed: [7263] (in reverse order)
[2025-12-16 08:24:21] 2025-12-16 13:23:28,699 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 08:24:21] 2025-12-16 13:23:28,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 08:24:21] 2025-12-16 13:23:28,703 | INFO     | did not find any defunct processes belonging to 7263
[2025-12-16 08:24:21] 2025-12-16 13:23:28,707 | INFO     | did not find any defunct processes belonging to 7263
[2025-12-16 08:24:21] 2025-12-16 13:23:28,707 | INFO     | ready for new job
[2025-12-16 08:24:21] 2025-12-16 13:23:28,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 08:24:21] 2025-12-16 13:23:28,709 | INFO     | ***************************************
[2025-12-16 08:24:21] 2025-12-16 13:23:28,710 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 08:24:21] 2025-12-16 13:23:28,710 | INFO     | ***************************************
[2025-12-16 08:24:21] 2025-12-16 13:23:28,710 | INFO     | 
[2025-12-16 08:24:21] 2025-12-16 13:23:28,711 | INFO     | architecture information:
[2025-12-16 08:24:21] 2025-12-16 13:23:28,711 | INFO     | executing command: cat /etc/os-release
[2025-12-16 08:24:21] 2025-12-16 13:23:28,729 | INFO     | cat /etc/os-release:
[2025-12-16 08:24:21] NAME="CentOS Linux"
[2025-12-16 08:24:21] VERSION="7 (Core)"
[2025-12-16 08:24:21] ID="centos"
[2025-12-16 08:24:21] ID_LIKE="rhel fedora"
[2025-12-16 08:24:21] VERSION_ID="7"
[2025-12-16 08:24:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 08:24:21] ANSI_COLOR="0;31"
[2025-12-16 08:24:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 08:24:21] HOME_URL="https://www.centos.org/"
[2025-12-16 08:24:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 08:24:21] 
[2025-12-16 08:24:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 08:24:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 08:24:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 08:24:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 08:24:21] 
[2025-12-16 08:24:21] 2025-12-16 13:23:28,730 | INFO     | ***************************************
[2025-12-16 08:24:21] 2025-12-16 13:23:29,233 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 08:24:21] 2025-12-16 13:23:29,253 | INFO     | sufficient remaining disk space (18684575744 B)
[2025-12-16 08:24:21] 2025-12-16 13:23:29,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 08:24:21] 2025-12-16 13:23:29,254 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 08:24:21] 2025-12-16 13:23:29,254 | INFO     | update_server=False
[2025-12-16 08:24:21] 2025-12-16 13:23:29,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 08:24:21] 2025-12-16 13:23:29,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 08:24:21] 2025-12-16 13:23:29,538 | INFO     | all job control threads have been joined
[2025-12-16 08:24:21] 2025-12-16 13:23:29,612 | INFO     | all data control threads have been joined
[2025-12-16 08:24:21] 2025-12-16 13:23:29,628 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 08:24:21] 2025-12-16 13:23:29,629 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 08:24:21] 2025-12-16 13:23:29,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 08:24:21] 2025-12-16 13:23:29,629 | INFO     | will abort loop
[2025-12-16 08:24:21] 2025-12-16 13:23:29,755 | INFO     | all payload control threads have been joined
[2025-12-16 08:24:21] 2025-12-16 13:23:30,260 | INFO     | [job] retrieve thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,260 | INFO     | [job] queue monitor thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,301 | INFO     | [payload] validate_post thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,505 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,544 | INFO     | [job] control thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 08:24:21] 2025-12-16 13:23:30,618 | INFO     | [data] control thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,635 | INFO     | [job] job monitor thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,761 | INFO     | [payload] control thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,969 | INFO     | [job] validate thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:30,969 | INFO     | [data] copytool_in thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:31,306 | INFO     | [payload] failed_post thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:31,373 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:31,410 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:32,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 08:24:21] 2025-12-16 13:23:32,590 | INFO     | [data] copytool_out thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:36,346 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:40,115 | INFO     | job.realtimelogging is not enabled
[2025-12-16 08:24:21] 2025-12-16 13:23:41,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 08:24:21] 2025-12-16 13:23:58,931 | INFO     | PID=31946 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 08:24:21] 2025-12-16 13:23:58,932 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 08:24:21] 2025-12-16 13:23:58,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 08:24:21] 2025-12-16 13:23:58,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 08:24:21] 2025-12-16 13:24:13,977 | INFO     | [monitor] cgroup control has ended
[2025-12-16 08:24:21] 2025-12-16 13:24:15,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620926396224)>', '<ExcThread(monitor, started 140619980732160)>']
[2025-12-16 08:24:21] 2025-12-16 13:24:15,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 08:24:21] 2025-12-16 13:24:15,991 | INFO     | [monitor] control thread has ended
[2025-12-16 08:24:21] 2025-12-16 13:24:20,953 | INFO     | all workflow threads have been joined
[2025-12-16 08:24:21] 2025-12-16 13:24:20,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 08:24:21] 2025-12-16 13:24:20,954 | INFO     | traces error code: 0
[2025-12-16 08:24:21] 2025-12-16 13:24:20,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 08:24:21] 2025-12-16 13:24:21,053 [wrapper] ==== pilot stdout END ====
[2025-12-16 08:24:21] 2025-12-16 13:24:21,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 08:24:21] 2025-12-16 13:24:21,063 [wrapper] pilotpid: 31946
[2025-12-16 08:24:21] 2025-12-16 13:24:21,067 [wrapper] Pilot exit status: 0
[2025-12-16 08:24:21] 2025-12-16 13:24:21,085 [wrapper] pandaids: 6930760068
[2025-12-16 08:24:21] 2025-12-16 13:24:21,140 [wrapper] cleanup supervisor_pilot 26723 31947
[2025-12-16 08:24:21] 2025-12-16 13:24:21,145 [wrapper] Test setup, not cleaning
[2025-12-16 08:24:21] 2025-12-16 13:24:21,150 [wrapper] apfmon messages muted
[2025-12-16 08:24:21] 2025-12-16 13:24:21,154 [wrapper] ==== wrapper stdout END ====
[2025-12-16 08:24:21] 2025-12-16 13:24:21,159 [wrapper] ==== wrapper stderr END ====
[2025-12-16 08:24:21]  *** Error codes and diagnostics ***
[2025-12-16 08:24:21]     "exeErrorCode": 0,
[2025-12-16 08:24:21]     "exeErrorDiag": "",
[2025-12-16 08:24:21]     "pilotErrorCode": 0,
[2025-12-16 08:24:21]     "pilotErrorDiag": "",
[2025-12-16 08:24:21]  *** Listing of results directory ***
[2025-12-16 08:24:21] total 338028
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 01:04 pilot3.tar.gz
[2025-12-16 08:24:21] -rwx------ 1 boincer umatlas     36322 Dec 16 01:05 runpilot2-wrapper.sh
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 01:05 queuedata.json
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas       100 Dec 16 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 08:24:21] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 06:19 run_atlas
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas       105 Dec 16 06:19 job.xml
[2025-12-16 08:24:21] -rw-r--r-- 2 boincer umatlas 191822708 Dec 16 06:19 EVNT.47886829._000486.pool.root.1
[2025-12-16 08:24:21] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 06:19 start_atlas.sh
[2025-12-16 08:24:21] drwxrwx--x 2 boincer umatlas      4096 Dec 16 06:19 shared
[2025-12-16 08:24:21] -rw-r--r-- 2 boincer umatlas    592415 Dec 16 06:19 input.tar.gz
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas         0 Dec 16 06:19 boinc_lockfile
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas      2539 Dec 16 06:19 pandaJob.out
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas        57 Dec 16 06:19 setup.sh.local
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas    991017 Dec 16 06:20 agis_schedconf.cvmfs.json
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas   1516240 Dec 16 06:20 agis_ddmendpoints.agis.ALL.json
[2025-12-16 08:24:21] drwx------ 5 boincer umatlas      4096 Dec 16 06:20 pilot3
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas      5909 Dec 16 08:21 init_data.xml
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas 147565678 Dec 16 08:22 HITS.47886831._012089.pool.root.1
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas       529 Dec 16 08:22 boinc_task_state.xml
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas      1048 Dec 16 08:23 memory_monitor_summary.json
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas    376400 Dec 16 08:23 log.47886831._012089.job.log.tgz.1
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas      7849 Dec 16 08:23 heartbeat.json
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 08:23 boinc_mmap_file
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas        27 Dec 16 08:23 wrapper_checkpoint.txt
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas        95 Dec 16 08:23 pilot_heartbeat.json
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas      5004 Dec 16 08:24 pilotlog.txt
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas   1044377 Dec 16 08:24 log.47886831._012089.job.log.1
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas       357 Dec 16 08:24 output.list
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas       620 Dec 16 08:24 runtime_log
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas   1443840 Dec 16 08:24 result.tar.gz
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas      9337 Dec 16 08:24 runtime_log.err
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas       658 Dec 16 08:24 7vDMDmZMdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk4UKDmImqDOm.diag
[2025-12-16 08:24:21] -rw-r--r-- 1 boincer umatlas     21337 Dec 16 08:24 stderr.txt
[2025-12-16 08:24:21] HITS file was successfully produced:
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas 147565678 Dec 16 08:22 shared/HITS.pool.root.1
[2025-12-16 08:24:21]  *** Contents of shared directory: ***
[2025-12-16 08:24:21] total 333444
[2025-12-16 08:24:21] -rw-r--r-- 2 boincer umatlas 191822708 Dec 16 06:19 ATLAS.root_0
[2025-12-16 08:24:21] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 06:19 start_atlas.sh
[2025-12-16 08:24:21] -rw-r--r-- 2 boincer umatlas    592415 Dec 16 06:19 input.tar.gz
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas 147565678 Dec 16 08:22 HITS.pool.root.1
[2025-12-16 08:24:21] -rw------- 1 boincer umatlas   1443840 Dec 16 08:24 result.tar.gz
08:24:22 (28186): run_atlas exited; CPU time 55027.365128
08:24:22 (28186): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN