Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:42:34 (1538376): wrapper (7.7.26015): starting
01:42:34 (1538376): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 01:42:34] Arguments: --nthreads 3
[2025-12-17 01:42:34] Threads: 3
[2025-12-17 01:42:34] Checking for CVMFS
[2025-12-17 01:42:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 01:42:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 01:42:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 01:42:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 01:42:34] 2.9.2.0 256385 5117 83816 154093 1 57 32511513 36864001 0 130560 0 3362106 99.989 186388 19124 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 01:42:34] CVMFS is ok
[2025-12-17 01:42:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 01:42:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 01:42:34] Further information can be found at the LHC@home message board.
[2025-12-17 01:42:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 01:42:34] Checking for apptainer binary...
[2025-12-17 01:42:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 01:42:34] Running /usr/bin/apptainer --version
[2025-12-17 01:42:34] apptainer version 1.4.1-1.1
[2025-12-17 01:42:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 01:42:34] thA305
[2025-12-17 01:42:34] apptainer works
[2025-12-17 01:42:34] Set ATHENA_PROC_NUMBER=3
[2025-12-17 01:42:34] Set ATHENA_CORE_NUMBER=3
[2025-12-17 01:42:34] Starting ATLAS job with PandaID=6930228386
[2025-12-17 01:42:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 03:37:53]  *** The last 200 lines of the pilot log: ***
[2025-12-17 03:37:53] VERSION="7 (Core)"
[2025-12-17 03:37:53] ID="centos"
[2025-12-17 03:37:53] ID_LIKE="rhel fedora"
[2025-12-17 03:37:53] VERSION_ID="7"
[2025-12-17 03:37:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 03:37:53] ANSI_COLOR="0;31"
[2025-12-17 03:37:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 03:37:53] HOME_URL="https://www.centos.org/"
[2025-12-17 03:37:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 03:37:53] 
[2025-12-17 03:37:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 03:37:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 03:37:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 03:37:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 03:37:53] 
[2025-12-17 03:37:53] 2025-12-17 02:37:18,536 | INFO     | ***************************************
[2025-12-17 03:37:53] 2025-12-17 02:37:19,039 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 03:37:53] 2025-12-17 02:37:19,052 | INFO     | sufficient remaining disk space (227481223168 B)
[2025-12-17 03:37:53] 2025-12-17 02:37:19,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 03:37:53] 2025-12-17 02:37:19,052 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 03:37:53] 2025-12-17 02:37:19,052 | INFO     | update_server=False
[2025-12-17 03:37:53] 2025-12-17 02:37:19,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 03:37:53] 2025-12-17 02:37:19,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:37:53] 2025-12-17 02:37:19,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:37:53] 2025-12-17 02:37:19,053 | INFO     | aborting loop
[2025-12-17 03:37:53] 2025-12-17 02:37:19,295 | INFO     | all job control threads have been joined
[2025-12-17 03:37:53] 2025-12-17 02:37:19,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 03:37:53] 2025-12-17 02:37:19,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 03:37:53] 2025-12-17 02:37:19,597 | INFO     | all data control threads have been joined
[2025-12-17 03:37:53] 2025-12-17 02:37:20,058 | INFO     | [job] queue monitor thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,058 | INFO     | [job] retrieve thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,058 | INFO     | [job] job monitor thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,094 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,104 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,220 | INFO     | all payload control threads have been joined
[2025-12-17 03:37:53] 2025-12-17 02:37:20,301 | INFO     | [job] control thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,602 | INFO     | [data] control thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,836 | INFO     | [payload] validate_post thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:20,963 | INFO     | [data] copytool_in thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:21,019 | INFO     | [payload] failed_post thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:21,226 | INFO     | [payload] control thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:21,422 | INFO     | [data] copytool_out thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:21,450 | INFO     | [job] validate thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:21,552 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:23,546 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:29,399 | INFO     | job.realtimelogging is not enabled
[2025-12-17 03:37:53] 2025-12-17 02:37:30,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 03:37:53] 2025-12-17 02:37:47,761 | INFO     | [monitor] cgroup control has ended
[2025-12-17 03:37:53] 2025-12-17 02:37:48,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695654946624)>', '<ExcThread(monitor, started 140695302022912)>']
[2025-12-17 03:37:53] 2025-12-17 02:37:49,603 | INFO     | PID=1542097 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 03:37:53] 2025-12-17 02:37:49,603 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 03:37:53] 2025-12-17 02:37:49,603 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 03:37:53] 2025-12-17 02:37:49,603 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 03:37:53] 2025-12-17 02:37:49,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 03:37:53] 2025-12-17 02:37:49,603 | INFO     | [monitor] control thread has ended
[2025-12-17 03:37:53] 2025-12-17 02:37:53,260 | INFO     | all workflow threads have been joined
[2025-12-17 03:37:53] 2025-12-17 02:37:53,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 03:37:53] 2025-12-17 02:37:53,261 | INFO     | traces error code: 0
[2025-12-17 03:37:53] 2025-12-17 02:37:53,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 03:37:53] 2025-12-17 02:37:53,311 [wrapper] ==== pilot stdout END ====
[2025-12-17 03:37:53] 2025-12-17 02:37:53,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 03:37:53] 2025-12-17 02:37:53,315 [wrapper] pilotpid: 1542097
[2025-12-17 03:37:53] 2025-12-17 02:37:53,317 [wrapper] Pilot exit status: 0
[2025-12-17 03:37:53] 2025-12-17 02:37:53,324 [wrapper] pandaids: 6930228386
[2025-12-17 03:37:53] 2025-12-17 02:37:53,340 [wrapper] cleanup supervisor_pilot 1562872 1542098
[2025-12-17 03:37:53] 2025-12-17 02:37:53,342 [wrapper] Test setup, not cleaning
[2025-12-17 03:37:53] 2025-12-17 02:37:53,345 [wrapper] apfmon messages muted
[2025-12-17 03:37:53] 2025-12-17 02:37:53,347 [wrapper] ==== wrapper stdout END ====
[2025-12-17 03:37:53] 2025-12-17 02:37:53,349 [wrapper] ==== wrapper stderr END ====
[2025-12-17 03:37:53]  *** Error codes and diagnostics ***
[2025-12-17 03:37:53]     "exeErrorCode": 0,
[2025-12-17 03:37:53]     "exeErrorDiag": "",
[2025-12-17 03:37:53]     "pilotErrorCode": 0,
[2025-12-17 03:37:53]     "pilotErrorDiag": "",
[2025-12-17 03:37:53]  *** Listing of results directory ***
[2025-12-17 03:37:53] total 408904
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc      5112 Dec 16 03:06 queuedata.json
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc    579449 Dec 16 03:06 pilot3.tar.gz
[2025-12-17 03:37:53] -rwx------ 1 boinc boinc     36322 Dec 16 03:06 runpilot2-wrapper.sh
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc       100 Dec 17 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 03:37:53] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 01:42 run_atlas
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc       105 Dec 17 01:42 job.xml
[2025-12-17 03:37:53] -rw-r--r-- 2 boinc boinc 213722167 Dec 17 01:42 EVNT.47898779._000171.pool.root.1
[2025-12-17 03:37:53] -rw-r--r-- 2 boinc boinc    592394 Dec 17 01:42 input.tar.gz
[2025-12-17 03:37:53] -rw-r--r-- 2 boinc boinc     15847 Dec 17 01:42 start_atlas.sh
[2025-12-17 03:37:53] drwxrwx--x 2 boinc boinc      4096 Dec 17 01:42 shared
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc         0 Dec 17 01:42 boinc_setup_complete
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc      6439 Dec 17 01:42 init_data.xml
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc         0 Dec 17 01:42 boinc_lockfile
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc      2519 Dec 17 01:42 pandaJob.out
[2025-12-17 03:37:53] -rw------- 1 boinc boinc    987401 Dec 17 01:42 agis_schedconf.cvmfs.json
[2025-12-17 03:37:53] -rw------- 1 boinc boinc   1516240 Dec 17 01:42 agis_ddmendpoints.agis.ALL.json
[2025-12-17 03:37:53] drwx------ 5 boinc boinc      4096 Dec 17 01:42 pilot3
[2025-12-17 03:37:53] -rw------- 1 boinc boinc 198573228 Dec 17 03:36 HITS.47898782._004170.pool.root.1
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc       529 Dec 17 03:36 boinc_task_state.xml
[2025-12-17 03:37:53] -rw------- 1 boinc boinc      1018 Dec 17 03:37 memory_monitor_summary.json
[2025-12-17 03:37:53] -rw------- 1 boinc boinc    264126 Dec 17 03:37 log.47898782._004170.job.log.tgz.1
[2025-12-17 03:37:53] -rw------- 1 boinc boinc        95 Dec 17 03:37 pilot_heartbeat.json
[2025-12-17 03:37:53] -rw------- 1 boinc boinc      7754 Dec 17 03:37 heartbeat.json
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc      8192 Dec 17 03:37 boinc_mmap_file
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc        27 Dec 17 03:37 wrapper_checkpoint.txt
[2025-12-17 03:37:53] -rw------- 1 boinc boinc      4824 Dec 17 03:37 pilotlog.txt
[2025-12-17 03:37:53] -rw------- 1 boinc boinc    992515 Dec 17 03:37 log.47898782._004170.job.log.1
[2025-12-17 03:37:53] -rw------- 1 boinc boinc       357 Dec 17 03:37 output.list
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc       620 Dec 17 03:37 runtime_log
[2025-12-17 03:37:53] -rw------- 1 boinc boinc   1280000 Dec 17 03:37 result.tar.gz
[2025-12-17 03:37:53] -rw------- 1 boinc boinc       659 Dec 17 03:37 vypLDmkdZp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSdUKDmR7EfKn.diag
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc      8897 Dec 17 03:37 runtime_log.err
[2025-12-17 03:37:53] -rw-r--r-- 1 boinc boinc      8759 Dec 17 03:37 stderr.txt
[2025-12-17 03:37:53] HITS file was successfully produced:
[2025-12-17 03:37:53] -rw------- 1 boinc boinc 198573228 Dec 17 03:36 shared/HITS.pool.root.1
[2025-12-17 03:37:53]  *** Contents of shared directory: ***
[2025-12-17 03:37:53] total 404492
[2025-12-17 03:37:53] -rw-r--r-- 2 boinc boinc 213722167 Dec 17 01:42 ATLAS.root_0
[2025-12-17 03:37:53] -rw-r--r-- 2 boinc boinc    592394 Dec 17 01:42 input.tar.gz
[2025-12-17 03:37:53] -rw-r--r-- 2 boinc boinc     15847 Dec 17 01:42 start_atlas.sh
[2025-12-17 03:37:53] -rw------- 1 boinc boinc 198573228 Dec 17 03:36 HITS.pool.root.1
[2025-12-17 03:37:53] -rw------- 1 boinc boinc   1280000 Dec 17 03:37 result.tar.gz
03:37:54 (1538376): run_atlas exited; CPU time 19951.159321
03:37:54 (1538376): called boinc_finish(0)

</stderr_txt>
]]>

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