Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:13 (1760042): wrapper (7.7.26015): starting
16:04:13 (1760042): wrapper: running run_atlas (--nthreads 2)
[2025-12-16 16:04:13] Arguments: --nthreads 2
[2025-12-16 16:04:13] Threads: 2
[2025-12-16 16:04:13] Checking for CVMFS
[2025-12-16 16:04:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 16:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 16:04:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 16:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 16:04:13] 2.9.2.0 925053 4306 65356 154073 1 57 35475726 36864001 0 130560 0 2222672 99.986 154606 19867 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 16:04:13] CVMFS is ok
[2025-12-16 16:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 16:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 16:04:13] Further information can be found at the LHC@home message board.
[2025-12-16 16:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 16:04:13] Checking for apptainer binary...
[2025-12-16 16:04:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 16:04:13] Running /usr/bin/apptainer --version
[2025-12-16 16:04:13] apptainer version 1.4.1-1.1
[2025-12-16 16:04:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 16:04:13] atlasA219
[2025-12-16 16:04:13] apptainer works
[2025-12-16 16:04:13] Set ATHENA_PROC_NUMBER=2
[2025-12-16 16:04:13] Set ATHENA_CORE_NUMBER=2
[2025-12-16 16:04:13] Starting ATLAS job with PandaID=6929806962
[2025-12-16 16:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 18:14:44]  *** The last 200 lines of the pilot log: ***
[2025-12-16 18:14:44] 2025-12-16 17:13:43,564 | INFO     | cat /etc/os-release:
[2025-12-16 18:14:44] NAME="CentOS Linux"
[2025-12-16 18:14:44] VERSION="7 (Core)"
[2025-12-16 18:14:44] ID="centos"
[2025-12-16 18:14:44] ID_LIKE="rhel fedora"
[2025-12-16 18:14:44] VERSION_ID="7"
[2025-12-16 18:14:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 18:14:44] ANSI_COLOR="0;31"
[2025-12-16 18:14:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 18:14:44] HOME_URL="https://www.centos.org/"
[2025-12-16 18:14:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 18:14:44] 
[2025-12-16 18:14:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 18:14:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 18:14:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 18:14:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 18:14:44] 
[2025-12-16 18:14:44] 2025-12-16 17:13:43,564 | INFO     | ***************************************
[2025-12-16 18:14:44] 2025-12-16 17:13:44,068 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 18:14:44] 2025-12-16 17:13:44,080 | INFO     | sufficient remaining disk space (174961197056 B)
[2025-12-16 18:14:44] 2025-12-16 17:13:44,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 18:14:44] 2025-12-16 17:13:44,080 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 18:14:44] 2025-12-16 17:13:44,080 | INFO     | update_server=False
[2025-12-16 18:14:44] 2025-12-16 17:13:44,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 18:14:44] 2025-12-16 17:13:44,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:14:44] 2025-12-16 17:13:44,798 | INFO     | all data control threads have been joined
[2025-12-16 18:14:44] 2025-12-16 17:13:45,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:14:44] 2025-12-16 17:13:45,002 | INFO     | aborting loop
[2025-12-16 18:14:44] 2025-12-16 17:13:45,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 18:14:44] 2025-12-16 17:13:45,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 18:14:44] 2025-12-16 17:13:45,086 | INFO     | [job] retrieve thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:45,086 | INFO     | [job] queue monitor thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:45,288 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:45,359 | INFO     | all job control threads have been joined
[2025-12-16 18:14:44] 2025-12-16 17:13:45,367 | INFO     | all payload control threads have been joined
[2025-12-16 18:14:44] 2025-12-16 17:13:45,384 | INFO     | [payload] failed_post thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:45,804 | INFO     | [data] control thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,007 | INFO     | [job] job monitor thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,107 | INFO     | [data] copytool_in thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,148 | INFO     | [job] validate thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,160 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,218 | INFO     | [payload] validate_post thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,294 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,365 | INFO     | [job] control thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:46,372 | INFO     | [payload] control thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:47,063 | INFO     | [data] copytool_out thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:49,055 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:13:54,537 | INFO     | job.realtimelogging is not enabled
[2025-12-16 18:14:44] 2025-12-16 17:13:55,543 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 18:14:44] 2025-12-16 17:14:14,556 | INFO     | PID=1763749 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 18:14:44] 2025-12-16 17:14:14,556 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 18:14:44] 2025-12-16 17:14:14,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 18:14:44] 2025-12-16 17:14:14,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 18:14:44] 2025-12-16 17:14:38,249 | INFO     | [monitor] cgroup control has ended
[2025-12-16 18:14:44] 2025-12-16 17:14:38,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673802385216)>', '<ExcThread(monitor, started 139673301133056)>']
[2025-12-16 18:14:44] 2025-12-16 17:14:38,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 18:14:44] 2025-12-16 17:14:38,686 | INFO     | [monitor] control thread has ended
[2025-12-16 18:14:44] 2025-12-16 17:14:43,470 | INFO     | all workflow threads have been joined
[2025-12-16 18:14:44] 2025-12-16 17:14:43,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 18:14:44] 2025-12-16 17:14:43,472 | INFO     | traces error code: 0
[2025-12-16 18:14:44] 2025-12-16 17:14:43,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 18:14:44] 2025-12-16 17:14:43,517 [wrapper] ==== pilot stdout END ====
[2025-12-16 18:14:44] 2025-12-16 17:14:43,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 18:14:44] 2025-12-16 17:14:43,522 [wrapper] pilotpid: 1763749
[2025-12-16 18:14:44] 2025-12-16 17:14:43,525 [wrapper] Pilot exit status: 0
[2025-12-16 18:14:44] 2025-12-16 17:14:43,531 [wrapper] pandaids: 6929806962
[2025-12-16 18:14:44] 2025-12-16 17:14:43,545 [wrapper] cleanup supervisor_pilot 1784509 1763750
[2025-12-16 18:14:44] 2025-12-16 17:14:43,547 [wrapper] Test setup, not cleaning
[2025-12-16 18:14:44] 2025-12-16 17:14:43,549 [wrapper] apfmon messages muted
[2025-12-16 18:14:44] 2025-12-16 17:14:43,551 [wrapper] ==== wrapper stdout END ====
[2025-12-16 18:14:44] 2025-12-16 17:14:43,553 [wrapper] ==== wrapper stderr END ====
[2025-12-16 18:14:44]  *** Error codes and diagnostics ***
[2025-12-16 18:14:44]     "exeErrorCode": 0,
[2025-12-16 18:14:44]     "exeErrorDiag": "",
[2025-12-16 18:14:44]     "pilotErrorCode": 0,
[2025-12-16 18:14:44]     "pilotErrorDiag": "",
[2025-12-16 18:14:44]  *** Listing of results directory ***
[2025-12-16 18:14:44] total 336028
[2025-12-16 18:14:44] -rwx------ 1 boinc boinc     36322 Dec 15 16:55 runpilot2-wrapper.sh
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc      5112 Dec 15 16:57 queuedata.json
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc    579449 Dec 15 16:57 pilot3.tar.gz
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc       100 Dec 16 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 18:14:44] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 16:04 run_atlas
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc       105 Dec 16 16:04 job.xml
[2025-12-16 18:14:44] -rw-r--r-- 2 boinc boinc 193186904 Dec 16 16:04 EVNT.47886929._000199.pool.root.1
[2025-12-16 18:14:44] -rw-r--r-- 2 boinc boinc    592398 Dec 16 16:04 input.tar.gz
[2025-12-16 18:14:44] -rw-r--r-- 2 boinc boinc     15847 Dec 16 16:04 start_atlas.sh
[2025-12-16 18:14:44] drwxrwx--x 2 boinc boinc      4096 Dec 16 16:04 shared
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc         0 Dec 16 16:04 boinc_setup_complete
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc      6208 Dec 16 16:04 init_data.xml
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc         0 Dec 16 16:04 boinc_lockfile
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc      2514 Dec 16 16:04 pandaJob.out
[2025-12-16 18:14:44] -rw------- 1 boinc boinc    987355 Dec 16 16:04 agis_schedconf.cvmfs.json
[2025-12-16 18:14:44] -rw------- 1 boinc boinc   1516240 Dec 16 16:04 agis_ddmendpoints.agis.ALL.json
[2025-12-16 18:14:44] drwx------ 5 boinc boinc      4096 Dec 16 16:04 pilot3
[2025-12-16 18:14:44] -rw------- 1 boinc boinc 144237294 Dec 16 18:13 HITS.47886933._005664.pool.root.1
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc       529 Dec 16 18:13 boinc_task_state.xml
[2025-12-16 18:14:44] -rw------- 1 boinc boinc      1013 Dec 16 18:13 memory_monitor_summary.json
[2025-12-16 18:14:44] -rw------- 1 boinc boinc    269928 Dec 16 18:13 log.47886933._005664.job.log.tgz.1
[2025-12-16 18:14:44] -rw------- 1 boinc boinc      7750 Dec 16 18:13 heartbeat.json
[2025-12-16 18:14:44] -rw------- 1 boinc boinc        95 Dec 16 18:14 pilot_heartbeat.json
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc      8192 Dec 16 18:14 boinc_mmap_file
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc        27 Dec 16 18:14 wrapper_checkpoint.txt
[2025-12-16 18:14:44] -rw------- 1 boinc boinc      4824 Dec 16 18:14 pilotlog.txt
[2025-12-16 18:14:44] -rw------- 1 boinc boinc   1115188 Dec 16 18:14 log.47886933._005664.job.log.1
[2025-12-16 18:14:44] -rw------- 1 boinc boinc       357 Dec 16 18:14 output.list
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc       620 Dec 16 18:14 runtime_log
[2025-12-16 18:14:44] -rw------- 1 boinc boinc   1402880 Dec 16 18:14 result.tar.gz
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc      8912 Dec 16 18:14 runtime_log.err
[2025-12-16 18:14:44] -rw------- 1 boinc boinc       662 Dec 16 18:14 O5GODmF6Pp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlrTKDmRmBAtn.diag
[2025-12-16 18:14:44] -rw-r--r-- 1 boinc boinc      8884 Dec 16 18:14 stderr.txt
[2025-12-16 18:14:44] HITS file was successfully produced:
[2025-12-16 18:14:44] -rw------- 1 boinc boinc 144237294 Dec 16 18:13 shared/HITS.pool.root.1
[2025-12-16 18:14:44]  *** Contents of shared directory: ***
[2025-12-16 18:14:44] total 331492
[2025-12-16 18:14:44] -rw-r--r-- 2 boinc boinc 193186904 Dec 16 16:04 ATLAS.root_0
[2025-12-16 18:14:44] -rw-r--r-- 2 boinc boinc    592398 Dec 16 16:04 input.tar.gz
[2025-12-16 18:14:44] -rw-r--r-- 2 boinc boinc     15847 Dec 16 16:04 start_atlas.sh
[2025-12-16 18:14:44] -rw------- 1 boinc boinc 144237294 Dec 16 18:13 HITS.pool.root.1
[2025-12-16 18:14:44] -rw------- 1 boinc boinc   1402880 Dec 16 18:14 result.tar.gz
18:14:45 (1760042): run_atlas exited; CPU time 15110.389282
18:14:45 (1760042): called boinc_finish(0)

</stderr_txt>
]]>

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