Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:43:06 (19046): wrapper (7.7.26015): starting
05:43:06 (19046): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 05:43:06] Arguments: --nthreads 8
[2025-12-16 05:43:06] Threads: 8
[2025-12-16 05:43:06] Checking for CVMFS
[2025-12-16 05:43:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 05:43:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 05:43:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 05:43:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 05:43:06] 2.11.2.0 2929 21282 83348 154067 2 57 13493833 20275200 1 130560 0 6264489 99.890 1206122 28248 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 05:43:06] CVMFS is ok
[2025-12-16 05:43:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 05:43:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 05:43:06] Further information can be found at the LHC@home message board.
[2025-12-16 05:43:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 05:43:06] Checking for apptainer binary...
[2025-12-16 05:43:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 05:43:06] Running /usr/bin/apptainer --version
[2025-12-16 05:43:06] apptainer version 1.3.2-1.el7
[2025-12-16 05:43:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 05:43:08] c-115-9.aglt2.org
[2025-12-16 05:43:08] apptainer works
[2025-12-16 05:43:08] Set ATHENA_PROC_NUMBER=8
[2025-12-16 05:43:08] Set ATHENA_CORE_NUMBER=8
[2025-12-16 05:43:08] Starting ATLAS job with PandaID=6932206770
[2025-12-16 05:43:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 07:29:47]  *** The last 200 lines of the pilot log: ***
[2025-12-16 07:29:47] 2025-12-16 12:29:12,115 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932206770/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 07:29:47] 2025-12-16 12:29:12,209 | INFO     | number of running child processes to parent process 29159: 1
[2025-12-16 07:29:47] 2025-12-16 12:29:12,210 | INFO     | maximum number of monitored processes: 6
[2025-12-16 07:29:47] 2025-12-16 12:29:12,401 | INFO     | time since job start (6347s) is within the limit (174528.0s)
[2025-12-16 07:29:47] 2025-12-16 12:29:14,405 | INFO     | time since job start (6349s) is within the limit (174528.0s)
[2025-12-16 07:29:47] 2025-12-16 12:29:14,713 | INFO     | monitor loop #469: job 0:6932206770 is in state 'finished'
[2025-12-16 07:29:47] 2025-12-16 12:29:14,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,318 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 07:29:47] 2025-12-16 12:29:15,322 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-12-16 07:29:47] 2025-12-16 12:29:15,325 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6932206770/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,326 | INFO     | extracted standard info from prmon json
[2025-12-16 07:29:47] 2025-12-16 12:29:15,326 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 07:29:47] 2025-12-16 12:29:15,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 07:29:47] 2025-12-16 12:29:15,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 07:29:47] 2025-12-16 12:29:15,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 07:29:47] 2025-12-16 12:29:15,330 | INFO     | fitting pss+swap vs Time
[2025-12-16 07:29:47] 2025-12-16 12:29:15,331 | INFO     | sum of square deviations: 348769330.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,331 | INFO     | sum of deviations: 7208311165.500001
[2025-12-16 07:29:47] 2025-12-16 12:29:15,331 | INFO     | mean x: 1765884977.5
[2025-12-16 07:29:47] 2025-12-16 12:29:15,332 | INFO     | mean y: 2521569.2596153845
[2025-12-16 07:29:47] 2025-12-16 12:29:15,332 | INFO     | intersect: -36494519040.07942
[2025-12-16 07:29:47] 2025-12-16 12:29:15,334 | INFO     | chi2: 1.468908257856642
[2025-12-16 07:29:47] 2025-12-16 12:29:15,335 | INFO     | sum of square deviations: 300842850.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,335 | INFO     | sum of deviations: 6906155687.000002
[2025-12-16 07:29:47] 2025-12-16 12:29:15,335 | INFO     | mean x: 1765884825.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,335 | INFO     | mean y: 2520607.9696969697
[2025-12-16 07:29:47] 2025-12-16 12:29:15,336 | INFO     | intersect: -40535173828.71295
[2025-12-16 07:29:47] 2025-12-16 12:29:15,336 | INFO     | chi2: 1.4720333377075914
[2025-12-16 07:29:47] 2025-12-16 12:29:15,336 | INFO     | current chi2=1.4720333377075914 (change=-0.21274847045311152 %)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,336 | INFO     | right removable region: 98
[2025-12-16 07:29:47] 2025-12-16 12:29:15,336 | INFO     | sum of square deviations: 300842850.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,337 | INFO     | sum of deviations: -7283176008.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,337 | INFO     | mean x: 1765885130.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,337 | INFO     | mean y: 2566588.121212121
[2025-12-16 07:29:47] 2025-12-16 12:29:15,337 | INFO     | intersect: 42753299110.76538
[2025-12-16 07:29:47] 2025-12-16 12:29:15,337 | INFO     | chi2: 0.0970182694855705
[2025-12-16 07:29:47] 2025-12-16 12:29:15,337 | INFO     | current chi2=0.0970182694855705 (change=93.39521246703761 %)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,338 | INFO     | sum of square deviations: 257521107.5
[2025-12-16 07:29:47] 2025-12-16 12:29:15,338 | INFO     | sum of deviations: -6822798211.0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,338 | INFO     | mean x: 1765885282.5
[2025-12-16 07:29:47] 2025-12-16 12:29:15,338 | INFO     | mean y: 2564774.638297872
[2025-12-16 07:29:47] 2025-12-16 12:29:15,338 | INFO     | intersect: 46788162519.367744
[2025-12-16 07:29:47] 2025-12-16 12:29:15,339 | INFO     | chi2: 0.08271328939404692
[2025-12-16 07:29:47] 2025-12-16 12:29:15,339 | INFO     | current chi2=0.08271328939404692 (change=14.744625076672971 %)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,339 | INFO     | left removable region: 20
[2025-12-16 07:29:47] 2025-12-16 12:29:15,339 | INFO     | sum of square deviations: 147126479.5
[2025-12-16 07:29:47] 2025-12-16 12:29:15,339 | INFO     | sum of deviations: -339710280.9999998
[2025-12-16 07:29:47] 2025-12-16 12:29:15,339 | INFO     | mean x: 1765885404.5
[2025-12-16 07:29:47] 2025-12-16 12:29:15,340 | INFO     | mean y: 2537350.923076923
[2025-12-16 07:29:47] 2025-12-16 12:29:15,340 | INFO     | intersect: 4079909616.0325217
[2025-12-16 07:29:47] 2025-12-16 12:29:15,340 | INFO     | chi2: 0.02440523517575526
[2025-12-16 07:29:47] 2025-12-16 12:29:15,340 | INFO     | current memory leak: -2.31 B/s (using 78 data points, chi2=0.02)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,341 | INFO     | could have reported an average CPU frequency of 2097 MHz (7 samples)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,341 | INFO     | ..............................
[2025-12-16 07:29:47] 2025-12-16 12:29:15,341 | INFO     | . Timing measurements:
[2025-12-16 07:29:47] 2025-12-16 12:29:15,341 | INFO     | . get job = 0 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | . initial setup = 2 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | . payload setup = 8 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | . stage-in = 0 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | . payload execution = 6313 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | . stage-out = 0 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | . log creation = 0 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,342 | INFO     | ..............................
[2025-12-16 07:29:47] 2025-12-16 12:29:15,436 | INFO     | 
[2025-12-16 07:29:47] 2025-12-16 12:29:15,436 | INFO     | job summary report
[2025-12-16 07:29:47] 2025-12-16 12:29:15,436 | INFO     | --------------------------------------------------
[2025-12-16 07:29:47] 2025-12-16 12:29:15,437 | INFO     | PanDA job id: 6932206770
[2025-12-16 07:29:47] 2025-12-16 12:29:15,437 | INFO     | task id: 47898896
[2025-12-16 07:29:47] 2025-12-16 12:29:15,437 | INFO     | errors: (none)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 07:29:47] 2025-12-16 12:29:15,438 | INFO     | pilot state: finished 
[2025-12-16 07:29:47] 2025-12-16 12:29:15,438 | INFO     | transexitcode: 0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,438 | INFO     | exeerrorcode: 0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,438 | INFO     | exeerrordiag: 
[2025-12-16 07:29:47] 2025-12-16 12:29:15,438 | INFO     | exitcode: 0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,439 | INFO     | exitmsg: OK
[2025-12-16 07:29:47] 2025-12-16 12:29:15,439 | INFO     | cpuconsumptiontime: 46610 s
[2025-12-16 07:29:47] 2025-12-16 12:29:15,439 | INFO     | nevents: 400
[2025-12-16 07:29:47] 2025-12-16 12:29:15,439 | INFO     | neventsw: 0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,439 | INFO     | pid: 29159
[2025-12-16 07:29:47] 2025-12-16 12:29:15,440 | INFO     | pgrp: 29159
[2025-12-16 07:29:47] 2025-12-16 12:29:15,440 | INFO     | corecount: 8
[2025-12-16 07:29:47] 2025-12-16 12:29:15,440 | INFO     | event service: False
[2025-12-16 07:29:47] 2025-12-16 12:29:15,440 | INFO     | sizes: {0: 2283778, 1: 2283977, 6: 2284239, 11: 2284267, 6325: 2311222, 6326: 2311221, 6327: 2320459, 6333: 2320597}
[2025-12-16 07:29:47] 2025-12-16 12:29:15,440 | INFO     | --------------------------------------------------
[2025-12-16 07:29:47] 2025-12-16 12:29:15,441 | INFO     | 
[2025-12-16 07:29:47] 2025-12-16 12:29:15,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 07:29:47] 2025-12-16 12:29:15,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 07:29:47] 2025-12-16 12:29:15,473 | INFO     | job 6932206770 has completed (purged errors)
[2025-12-16 07:29:47] 2025-12-16 12:29:15,474 | INFO     | overall cleanup function is called
[2025-12-16 07:29:47] 2025-12-16 12:29:16,482 | INFO     | --- collectZombieJob: --- 10, [29159]
[2025-12-16 07:29:47] 2025-12-16 12:29:16,483 | INFO     | zombie collector waiting for pid 29159
[2025-12-16 07:29:47] 2025-12-16 12:29:16,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 07:29:47] 2025-12-16 12:29:16,483 | INFO     | collected zombie processes
[2025-12-16 07:29:47] 2025-12-16 12:29:16,483 | INFO     | will attempt to kill all subprocesses of pid=29159
[2025-12-16 07:29:47] 2025-12-16 12:29:16,578 | INFO     | process IDs to be killed: [29159] (in reverse order)
[2025-12-16 07:29:47] 2025-12-16 12:29:16,632 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 07:29:47] 2025-12-16 12:29:16,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 07:29:47] 2025-12-16 12:29:16,637 | INFO     | did not find any defunct processes belonging to 29159
[2025-12-16 07:29:47] 2025-12-16 12:29:16,641 | INFO     | did not find any defunct processes belonging to 29159
[2025-12-16 07:29:47] 2025-12-16 12:29:16,642 | INFO     | ready for new job
[2025-12-16 07:29:47] 2025-12-16 12:29:16,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 07:29:47] 2025-12-16 12:29:16,644 | INFO     | ***************************************
[2025-12-16 07:29:47] 2025-12-16 12:29:16,644 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 07:29:47] 2025-12-16 12:29:16,644 | INFO     | ***************************************
[2025-12-16 07:29:47] 2025-12-16 12:29:16,644 | INFO     | 
[2025-12-16 07:29:47] 2025-12-16 12:29:16,644 | INFO     | architecture information:
[2025-12-16 07:29:47] 2025-12-16 12:29:16,645 | INFO     | executing command: cat /etc/os-release
[2025-12-16 07:29:47] 2025-12-16 12:29:16,663 | INFO     | cat /etc/os-release:
[2025-12-16 07:29:47] NAME="CentOS Linux"
[2025-12-16 07:29:47] VERSION="7 (Core)"
[2025-12-16 07:29:47] ID="centos"
[2025-12-16 07:29:47] ID_LIKE="rhel fedora"
[2025-12-16 07:29:47] VERSION_ID="7"
[2025-12-16 07:29:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 07:29:47] ANSI_COLOR="0;31"
[2025-12-16 07:29:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 07:29:47] HOME_URL="https://www.centos.org/"
[2025-12-16 07:29:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 07:29:47] 
[2025-12-16 07:29:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 07:29:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 07:29:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 07:29:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 07:29:47] 
[2025-12-16 07:29:47] 2025-12-16 12:29:16,663 | INFO     | ***************************************
[2025-12-16 07:29:47] 2025-12-16 12:29:17,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 07:29:47] 2025-12-16 12:29:17,190 | INFO     | sufficient remaining disk space (18633195520 B)
[2025-12-16 07:29:47] 2025-12-16 12:29:17,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 07:29:47] 2025-12-16 12:29:17,191 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 07:29:47] 2025-12-16 12:29:17,191 | INFO     | update_server=False
[2025-12-16 07:29:47] 2025-12-16 12:29:17,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 07:29:47] 2025-12-16 12:29:17,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 07:29:47] 2025-12-16 12:29:17,217 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 07:29:47] 2025-12-16 12:29:17,217 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 07:29:47] 2025-12-16 12:29:17,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 07:29:47] 2025-12-16 12:29:17,218 | INFO     | will abort loop
[2025-12-16 07:29:47] 2025-12-16 12:29:17,532 | INFO     | all payload control threads have been joined
[2025-12-16 07:29:47] 2025-12-16 12:29:17,648 | INFO     | all data control threads have been joined
[2025-12-16 07:29:47] 2025-12-16 12:29:17,747 | INFO     | all job control threads have been joined
[2025-12-16 07:29:47] 2025-12-16 12:29:17,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 07:29:47] 2025-12-16 12:29:18,197 | INFO     | [job] retrieve thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,198 | INFO     | [job] queue monitor thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,223 | INFO     | [job] job monitor thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,421 | INFO     | [payload] failed_post thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,537 | INFO     | [payload] control thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,653 | INFO     | [data] control thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,753 | INFO     | [job] control thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,822 | INFO     | [payload] validate_post thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:18,917 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:19,163 | INFO     | [data] copytool_in thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:19,165 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:19,217 | INFO     | [job] validate thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:19,448 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:19,889 | INFO     | [data] copytool_out thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:20,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 07:29:47] 2025-12-16 12:29:24,470 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:28,001 | INFO     | job.realtimelogging is not enabled
[2025-12-16 07:29:47] 2025-12-16 12:29:29,007 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 07:29:47] 2025-12-16 12:29:35,312 | INFO     | [monitor] cgroup control has ended
[2025-12-16 07:29:47] 2025-12-16 12:29:35,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015201040192)>', '<ExcThread(monitor, started 140014742640384)>']
[2025-12-16 07:29:47] 2025-12-16 12:29:40,642 | INFO     | all workflow threads have been joined
[2025-12-16 07:29:47] 2025-12-16 12:29:40,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 07:29:47] 2025-12-16 12:29:40,642 | INFO     | traces error code: 0
[2025-12-16 07:29:47] 2025-12-16 12:29:40,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 07:29:47] 2025-12-16 12:29:47,631 | INFO     | PID=22721 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 07:29:47] 2025-12-16 12:29:47,631 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 07:29:47] 2025-12-16 12:29:47,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 07:29:47] 2025-12-16 12:29:47,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 07:29:47] 2025-12-16 12:29:47,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 07:29:47] 2025-12-16 12:29:47,632 | INFO     | [monitor] control thread has ended
[2025-12-16 07:29:47] 2025-12-16 12:29:47,753 [wrapper] ==== pilot stdout END ====
[2025-12-16 07:29:47] 2025-12-16 12:29:47,758 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 07:29:47] 2025-12-16 12:29:47,762 [wrapper] pilotpid: 22721
[2025-12-16 07:29:47] 2025-12-16 12:29:47,767 [wrapper] Pilot exit status: 0
[2025-12-16 07:29:47] 2025-12-16 12:29:47,785 [wrapper] pandaids: 6932206770
[2025-12-16 07:29:47] 2025-12-16 12:29:47,827 [wrapper] cleanup supervisor_pilot 16367 22722
[2025-12-16 07:29:47] 2025-12-16 12:29:47,831 [wrapper] Test setup, not cleaning
[2025-12-16 07:29:47] 2025-12-16 12:29:47,836 [wrapper] apfmon messages muted
[2025-12-16 07:29:47] 2025-12-16 12:29:47,840 [wrapper] ==== wrapper stdout END ====
[2025-12-16 07:29:47] 2025-12-16 12:29:47,845 [wrapper] ==== wrapper stderr END ====
[2025-12-16 07:29:47]  *** Error codes and diagnostics ***
[2025-12-16 07:29:47]     "exeErrorCode": 0,
[2025-12-16 07:29:47]     "exeErrorDiag": "",
[2025-12-16 07:29:47]     "pilotErrorCode": 0,
[2025-12-16 07:29:47]     "pilotErrorDiag": "",
[2025-12-16 07:29:47]  *** Listing of results directory ***
[2025-12-16 07:29:47] total 373868
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 15:57 pilot3.tar.gz
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 15:57 queuedata.json
[2025-12-16 07:29:47] -rwx------ 1 boincer umatlas     36322 Dec 15 15:57 runpilot2-wrapper.sh
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas       100 Dec 16 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 07:29:47] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 05:43 run_atlas
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas       105 Dec 16 05:43 job.xml
[2025-12-16 07:29:47] -rw-r--r-- 2 boincer umatlas 200140605 Dec 16 05:43 EVNT.47898894._000082.pool.root.1
[2025-12-16 07:29:47] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 05:43 start_atlas.sh
[2025-12-16 07:29:47] drwxrwx--x 2 boincer umatlas      4096 Dec 16 05:43 shared
[2025-12-16 07:29:47] -rw-r--r-- 2 boincer umatlas    592394 Dec 16 05:43 input.tar.gz
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas         0 Dec 16 05:43 boinc_lockfile
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas      2506 Dec 16 05:43 pandaJob.out
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas        57 Dec 16 05:43 setup.sh.local
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas    990636 Dec 16 05:43 agis_schedconf.cvmfs.json
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas   1516240 Dec 16 05:43 agis_ddmendpoints.agis.ALL.json
[2025-12-16 07:29:47] drwx------ 5 boincer umatlas      4096 Dec 16 05:43 pilot3
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas      5909 Dec 16 07:22 init_data.xml
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas 176299571 Dec 16 07:28 HITS.47898896._002090.pool.root.1
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas        95 Dec 16 07:28 pilot_heartbeat.json
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas      1045 Dec 16 07:29 memory_monitor_summary.json
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas       529 Dec 16 07:29 boinc_task_state.xml
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas    345978 Dec 16 07:29 log.47898896._002090.job.log.tgz.1
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas      7833 Dec 16 07:29 heartbeat.json
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 07:29 boinc_mmap_file
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas        27 Dec 16 07:29 wrapper_checkpoint.txt
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas       745 Dec 16 07:29 pilotlog.txt
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas    900908 Dec 16 07:29 log.47898896._002090.job.log.1
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas       357 Dec 16 07:29 output.list
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas       620 Dec 16 07:29 runtime_log
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas   1269760 Dec 16 07:29 result.tar.gz
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas      9337 Dec 16 07:29 runtime_log.err
[2025-12-16 07:29:47] -rw------- 1 boincer umatlas       657 Dec 16 07:29 jPkKDmioUp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSCUKDmrpE2Nn.diag
[2025-12-16 07:29:47] -rw-r--r-- 1 boincer umatlas     21255 Dec 16 07:29 stderr.txt
[2025-12-16 07:29:48] HITS file was successfully produced:
[2025-12-16 07:29:48] -rw------- 1 boincer umatlas 176299571 Dec 16 07:28 shared/HITS.pool.root.1
[2025-12-16 07:29:48]  *** Contents of shared directory: ***
[2025-12-16 07:29:48] total 369456
[2025-12-16 07:29:48] -rw-r--r-- 2 boincer umatlas 200140605 Dec 16 05:43 ATLAS.root_0
[2025-12-16 07:29:48] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 05:43 start_atlas.sh
[2025-12-16 07:29:48] -rw-r--r-- 2 boincer umatlas    592394 Dec 16 05:43 input.tar.gz
[2025-12-16 07:29:48] -rw------- 1 boincer umatlas 176299571 Dec 16 07:28 HITS.pool.root.1
[2025-12-16 07:29:48] -rw------- 1 boincer umatlas   1269760 Dec 16 07:29 result.tar.gz
07:29:49 (19046): run_atlas exited; CPU time 46623.224601
07:29:49 (19046): called boinc_finish(0)

</stderr_txt>
]]>

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