Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:01:09 (692582): wrapper (7.7.26015): starting
18:01:09 (692582): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 18:01:09] Arguments: --nthreads 3
[2025-12-16 18:01:09] Threads: 3
[2025-12-16 18:01:09] Checking for CVMFS
[2025-12-16 18:01:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 18:01:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 18:01:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 18:01:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 18:01:09] 2.9.2.0 3658277 4838 80792 154079 0 56 19732866 36864000 0 130560 0 3213580 99.989 175457 15874 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 18:01:09] CVMFS is ok
[2025-12-16 18:01:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 18:01:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 18:01:09] Further information can be found at the LHC@home message board.
[2025-12-16 18:01:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 18:01:09] Checking for apptainer binary...
[2025-12-16 18:01:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 18:01:09] Running /usr/bin/apptainer --version
[2025-12-16 18:01:09] apptainer version 1.4.1-1.1
[2025-12-16 18:01:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 18:01:09] thA305b
[2025-12-16 18:01:09] apptainer works
[2025-12-16 18:01:09] Set ATHENA_PROC_NUMBER=3
[2025-12-16 18:01:09] Set ATHENA_CORE_NUMBER=3
[2025-12-16 18:01:09] Starting ATLAS job with PandaID=6929961931
[2025-12-16 18:01:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 19:56:28]  *** The last 200 lines of the pilot log: ***
[2025-12-16 19:56:28] 2025-12-16 18:55:33,666 | INFO     | [job] retrieve thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:33,666 | INFO     | [job] job monitor thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:33,666 | INFO     | [job] queue monitor thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,055 | INFO     | [job] control thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,067 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,095 | INFO     | [payload] failed_post thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,242 | INFO     | [data] copytool_in thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,365 | INFO     | [data] control thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,457 | INFO     | [payload] control thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,532 | INFO     | [job] validate thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,540 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,607 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,667 | INFO     | [data] copytool_out thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:34,805 | INFO     | [payload] validate_post thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:36,668 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:55:43,291 | INFO     | job.realtimelogging is not enabled
[2025-12-16 19:56:28] 2025-12-16 18:55:44,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 19:56:28] 2025-12-16 18:56:22,927 | INFO     | [monitor] cgroup control has ended
[2025-12-16 19:56:28] 2025-12-16 18:56:23,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007197759296)>', '<ExcThread(monitor, started 140006832187136)>']
[2025-12-16 19:56:28] 2025-12-16 18:56:23,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 19:56:28] 2025-12-16 18:56:23,930 | INFO     | [monitor] control thread has ended
[2025-12-16 19:56:28] 2025-12-16 18:56:28,598 | INFO     | all workflow threads have been joined
[2025-12-16 19:56:28] 2025-12-16 18:56:28,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 19:56:28] 2025-12-16 18:56:28,598 | INFO     | traces error code: 0
[2025-12-16 19:56:28] 2025-12-16 18:56:28,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 19:56:28] 2025-12-16 18:56:28,651 [wrapper] ==== pilot stdout END ====
[2025-12-16 19:56:28] 2025-12-16 18:56:28,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 19:56:28] 2025-12-16 18:56:28,657 [wrapper] pilotpid: 696314
[2025-12-16 19:56:28] 2025-12-16 18:56:28,659 [wrapper] Pilot exit status: 0
[2025-12-16 19:56:28] 2025-12-16 18:56:28,667 [wrapper] pandaids: 6929961931
[2025-12-16 19:56:28] 2025-12-16 18:56:28,685 [wrapper] cleanup supervisor_pilot  717171 696315
[2025-12-16 19:56:28] 2025-12-16 18:56:28,688 [wrapper] Test setup, not cleaning
[2025-12-16 19:56:28] 2025-12-16 18:56:28,690 [wrapper] apfmon messages muted
[2025-12-16 19:56:28] 2025-12-16 18:56:28,693 [wrapper] ==== wrapper stdout END ====
[2025-12-16 19:56:28] 2025-12-16 18:56:28,695 [wrapper] ==== wrapper stderr END ====
[2025-12-16 19:56:28]  *** Error codes and diagnostics ***
[2025-12-16 19:56:28]     "exeErrorCode": 0,
[2025-12-16 19:56:28]     "exeErrorDiag": "",
[2025-12-16 19:56:28]     "pilotErrorCode": 0,
[2025-12-16 19:56:28]     "pilotErrorDiag": "",
[2025-12-16 19:56:28]  *** Listing of results directory ***
[2025-12-16 19:56:28] total 438768
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-16 19:56:28] -rwx------ 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc      5112 Dec 15 19:31 queuedata.json
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc       100 Dec 16 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 19:56:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 18:01 run_atlas
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc       105 Dec 16 18:01 job.xml
[2025-12-16 19:56:28] -rw-r--r-- 2 boinc boinc 223397105 Dec 16 18:01 EVNT.47898824._000175.pool.root.1
[2025-12-16 19:56:28] -rw-r--r-- 2 boinc boinc    592390 Dec 16 18:01 input.tar.gz
[2025-12-16 19:56:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 18:01 start_atlas.sh
[2025-12-16 19:56:28] drwxrwx--x 2 boinc boinc      4096 Dec 16 18:01 shared
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc         0 Dec 16 18:01 boinc_setup_complete
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc      6447 Dec 16 18:01 init_data.xml
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc         0 Dec 16 18:01 boinc_lockfile
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc      2515 Dec 16 18:01 pandaJob.out
[2025-12-16 19:56:28] -rw------- 1 boinc boinc    987401 Dec 16 18:01 agis_schedconf.cvmfs.json
[2025-12-16 19:56:28] -rw------- 1 boinc boinc   1516240 Dec 16 18:01 agis_ddmendpoints.agis.ALL.json
[2025-12-16 19:56:28] drwx------ 5 boinc boinc      4096 Dec 16 18:01 pilot3
[2025-12-16 19:56:28] -rw------- 1 boinc boinc        95 Dec 16 19:54 pilot_heartbeat.json
[2025-12-16 19:56:28] -rw------- 1 boinc boinc 219464856 Dec 16 19:55 HITS.47898826._002915.pool.root.1
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc       529 Dec 16 19:55 boinc_task_state.xml
[2025-12-16 19:56:28] -rw------- 1 boinc boinc      1015 Dec 16 19:55 memory_monitor_summary.json
[2025-12-16 19:56:28] -rw------- 1 boinc boinc    283364 Dec 16 19:55 log.47898826._002915.job.log.tgz.1
[2025-12-16 19:56:28] -rw------- 1 boinc boinc      7747 Dec 16 19:55 heartbeat.json
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc      8192 Dec 16 19:56 boinc_mmap_file
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc        27 Dec 16 19:56 wrapper_checkpoint.txt
[2025-12-16 19:56:28] -rw------- 1 boinc boinc      4628 Dec 16 19:56 pilotlog.txt
[2025-12-16 19:56:28] -rw------- 1 boinc boinc    987131 Dec 16 19:56 log.47898826._002915.job.log.1
[2025-12-16 19:56:28] -rw------- 1 boinc boinc       357 Dec 16 19:56 output.list
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc       620 Dec 16 19:56 runtime_log
[2025-12-16 19:56:28] -rw------- 1 boinc boinc   1290240 Dec 16 19:56 result.tar.gz
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc      8902 Dec 16 19:56 runtime_log.err
[2025-12-16 19:56:28] -rw------- 1 boinc boinc       660 Dec 16 19:56 1RkMDmPUSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFdYKDmtXPpQo.diag
[2025-12-16 19:56:28] -rw-r--r-- 1 boinc boinc      5836 Dec 16 19:56 stderr.txt
[2025-12-16 19:56:28] HITS file was successfully produced:
[2025-12-16 19:56:28] -rw------- 1 boinc boinc 219464856 Dec 16 19:55 shared/HITS.pool.root.1
[2025-12-16 19:56:28]  *** Contents of shared directory: ***
[2025-12-16 19:56:28] total 434348
[2025-12-16 19:56:28] -rw-r--r-- 2 boinc boinc 223397105 Dec 16 18:01 ATLAS.root_0
[2025-12-16 19:56:28] -rw-r--r-- 2 boinc boinc    592390 Dec 16 18:01 input.tar.gz
[2025-12-16 19:56:28] -rw-r--r-- 2 boinc boinc     15847 Dec 16 18:01 start_atlas.sh
[2025-12-16 19:56:28] -rw------- 1 boinc boinc 219464856 Dec 16 19:55 HITS.pool.root.1
[2025-12-16 19:56:28] -rw------- 1 boinc boinc   1290240 Dec 16 19:56 result.tar.gz
19:56:29 (692582): run_atlas exited; CPU time 19868.285121
19:56:29 (692582): called boinc_finish(0)

</stderr_txt>
]]>

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