Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:10:18 (4057962): wrapper (7.7.26015): starting
21:10:18 (4057962): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 21:10:18] Arguments: --nthreads 12
[2025-12-16 21:10:18] Threads: 12
[2025-12-16 21:10:18] Checking for CVMFS
[2025-12-16 21:10:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:10:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:10:20] 2.13.3.0 1314509 5272 264740 154084 3 489 38768602 46080000 35603 130560 0 39711417 99.783 26020947 29462 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-16 21:10:20] CVMFS is ok
[2025-12-16 21:10:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:10:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:10:20] Further information can be found at the LHC@home message board.
[2025-12-16 21:10:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:10:20] Checking for apptainer binary...
[2025-12-16 21:10:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 21:10:20] Running /usr/bin/apptainer --version
[2025-12-16 21:10:21] apptainer version 1.4.4-1.el9
[2025-12-16 21:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:13:04] mff2103.farm.particle.cz
[2025-12-16 21:13:04] apptainer works
[2025-12-16 21:13:04] Set ATHENA_PROC_NUMBER=12
[2025-12-16 21:13:04] Set ATHENA_CORE_NUMBER=12
[2025-12-16 21:13:04] Starting ATLAS job with PandaID=6930754996
[2025-12-16 21:13:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 22:47:12]  *** The last 200 lines of the pilot log: ***
[2025-12-16 22:47:12] 2025-12-16 21:44:18,635 | INFO     | .. there are 57 such processes running
[2025-12-16 22:47:12] 2025-12-16 21:44:19,639 | INFO     | time since job start (5381s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:20,926 | INFO     | monitor loop #379: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:20,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:21,650 | INFO     | time since job start (5383s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:21,651 | INFO     | 5387s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-16 22:47:12] 2025-12-16 21:44:23,434 | INFO     | monitor loop #380: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:23,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:23,659 | INFO     | time since job start (5385s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:25,668 | INFO     | time since job start (5387s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:25,942 | INFO     | monitor loop #381: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:25,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:27,675 | INFO     | time since job start (5389s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:28,449 | INFO     | monitor loop #382: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:28,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:29,693 | INFO     | time since job start (5391s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:30,956 | INFO     | monitor loop #383: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:30,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:31,126 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-12-16 22:47:12] 2025-12-16 21:44:31,702 | INFO     | time since job start (5393s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:33,461 | INFO     | monitor loop #384: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:33,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:33,708 | INFO     | time since job start (5395s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:35,716 | INFO     | time since job start (5397s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:35,971 | INFO     | monitor loop #385: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:35,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:37,723 | INFO     | time since job start (5399s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:38,478 | INFO     | monitor loop #386: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:38,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:39,733 | INFO     | time since job start (5401s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:41,006 | INFO     | monitor loop #387: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:41,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:41,812 | INFO     | PID=4087210 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:47:12] 2025-12-16 21:44:41,812 | INFO     | .. there are 57 such processes running
[2025-12-16 22:47:12] 2025-12-16 21:44:42,816 | INFO     | time since job start (5404s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:43,511 | INFO     | monitor loop #388: job 0:6930754996 is in state 'finished'
[2025-12-16 22:47:12] 2025-12-16 21:44:43,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:47:12] 2025-12-16 21:44:44,600 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 22:47:12] 2025-12-16 21:44:44,635 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2770.083843750001
[2025-12-16 22:47:12] 2025-12-16 21:44:44,671 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6930754996/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 22:47:12] 2025-12-16 21:44:44,671 | INFO     | extracted standard info from prmon json
[2025-12-16 22:47:12] 2025-12-16 21:44:44,672 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:47:12] 2025-12-16 21:44:44,672 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:47:12] 2025-12-16 21:44:44,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:47:12] 2025-12-16 21:44:44,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:47:12] 2025-12-16 21:44:44,681 | INFO     | fitting pss+swap vs Time
[2025-12-16 22:47:12] 2025-12-16 21:44:44,681 | INFO     | sum of square deviations: 147116004.8333334
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | sum of deviations: -980364148.5
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | mean x: 1765918928.8333333
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | mean y: 2749298.730769231
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | intersect: 11770630087.412025
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | chi2: 0.15192555206817437
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | current memory leak: -6.66 B/s (using 78 data points, chi2=0.15)
[2025-12-16 22:47:12] 2025-12-16 21:44:44,682 | INFO     | could have reported an average CPU frequency of 2770 MHz (6 samples)
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | ..............................
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . Timing measurements:
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . get job = 0 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . initial setup = 4 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . payload setup = 58 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . stage-in = 0 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . payload execution = 5214 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . stage-out = 1 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,683 | INFO     | . log creation = 0 s
[2025-12-16 22:47:12] 2025-12-16 21:44:44,688 | INFO     | ..............................
[2025-12-16 22:47:12] 2025-12-16 21:44:44,837 | INFO     | time since job start (5406s) is within the limit (174528.0s)
[2025-12-16 22:47:12] 2025-12-16 21:44:45,273 | INFO     | 
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | job summary report
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | --------------------------------------------------
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | PanDA job id: 6930754996
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | task id: 47898878
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | errors: (none)
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | pilot state: finished 
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | transexitcode: 0
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | exeerrorcode: 0
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | exeerrordiag: 
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | exitcode: 0
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | exitmsg: OK
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | cpuconsumptiontime: 37158 s
[2025-12-16 22:47:12] 2025-12-16 21:44:45,274 | INFO     | nevents: 400
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | neventsw: 0
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | pid: 4103367
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | pgrp: 4103367
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | corecount: 12
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | event service: False
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | sizes: {0: 2283062, 1: 2283748, 2: 2283947, 13: 2283947, 24: 2284003, 34: 2284031, 44: 2284449, 45: 2284477, 5276: 2311008, 5278: 2320064, 5320: 2320202}
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | --------------------------------------------------
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | 
[2025-12-16 22:47:12] 2025-12-16 21:44:45,275 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | job 6930754996 has completed (purged errors)
[2025-12-16 22:47:12] 2025-12-16 21:44:45,430 | INFO     | overall cleanup function is called
[2025-12-16 22:47:12] 2025-12-16 21:44:46,445 | INFO     | --- collectZombieJob: --- 10, [4103367]
[2025-12-16 22:47:12] 2025-12-16 21:44:46,445 | INFO     | zombie collector waiting for pid 4103367
[2025-12-16 22:47:12] 2025-12-16 21:44:46,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 22:47:12] 2025-12-16 21:44:46,445 | INFO     | collected zombie processes
[2025-12-16 22:47:12] 2025-12-16 21:44:46,446 | INFO     | will attempt to kill all subprocesses of pid=4103367
[2025-12-16 22:47:12] 2025-12-16 21:44:47,467 | INFO     | process IDs to be killed: [4103367] (in reverse order)
[2025-12-16 22:47:12] 2025-12-16 21:44:47,971 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 22:47:12] 2025-12-16 21:44:47,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 22:47:12] 2025-12-16 21:44:48,015 | INFO     | did not find any defunct processes belonging to 4103367
[2025-12-16 22:47:12] 2025-12-16 21:44:48,059 | INFO     | did not find any defunct processes belonging to 4103367
[2025-12-16 22:47:12] 2025-12-16 21:44:48,059 | INFO     | ready for new job
[2025-12-16 22:47:12] 2025-12-16 21:44:48,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 22:47:12] 2025-12-16 21:44:48,066 | INFO     | ***************************************
[2025-12-16 22:47:12] 2025-12-16 21:44:48,066 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 22:47:12] 2025-12-16 21:44:48,066 | INFO     | ***************************************
[2025-12-16 22:47:12] 2025-12-16 21:44:48,067 | INFO     | 
[2025-12-16 22:47:12] 2025-12-16 21:44:48,077 | INFO     | architecture information:
[2025-12-16 22:47:12] 2025-12-16 21:44:48,081 | INFO     | executing command: cat /etc/os-release
[2025-12-16 22:47:12] 2025-12-16 21:44:48,180 | INFO     | cat /etc/os-release:
[2025-12-16 22:47:12] NAME="CentOS Linux"
[2025-12-16 22:47:12] VERSION="7 (Core)"
[2025-12-16 22:47:12] ID="centos"
[2025-12-16 22:47:12] ID_LIKE="rhel fedora"
[2025-12-16 22:47:12] VERSION_ID="7"
[2025-12-16 22:47:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 22:47:12] ANSI_COLOR="0;31"
[2025-12-16 22:47:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 22:47:12] HOME_URL="https://www.centos.org/"
[2025-12-16 22:47:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 22:47:12] 
[2025-12-16 22:47:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 22:47:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 22:47:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 22:47:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 22:47:12] 
[2025-12-16 22:47:12] 2025-12-16 21:44:48,180 | INFO     | ***************************************
[2025-12-16 22:47:12] 2025-12-16 21:44:48,684 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-12-16 22:47:12] 2025-12-16 21:44:48,812 | INFO     | sufficient remaining disk space (1535576637440 B)
[2025-12-16 22:47:12] 2025-12-16 21:44:48,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 22:47:12] 2025-12-16 21:44:48,813 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 22:47:12] 2025-12-16 21:44:48,813 | INFO     | update_server=False
[2025-12-16 22:47:12] 2025-12-16 21:44:48,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 22:47:12] 2025-12-16 21:44:48,876 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 22:47:12] 2025-12-16 21:44:49,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:47:12] 2025-12-16 21:44:49,537 | INFO     | aborting loop
[2025-12-16 22:47:12] 2025-12-16 21:44:49,546 | INFO     | all job control threads have been joined
[2025-12-16 22:47:12] 2025-12-16 21:44:49,821 | INFO     | [job] retrieve thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:49,829 | INFO     | all data control threads have been joined
[2025-12-16 22:47:12] 2025-12-16 21:44:49,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:47:12] 2025-12-16 21:44:50,026 | INFO     | [payload] validate_post thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,050 | INFO     | all payload control threads have been joined
[2025-12-16 22:47:12] 2025-12-16 21:44:50,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 22:47:12] 2025-12-16 21:44:50,497 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,537 | INFO     | [job] validate thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,541 | INFO     | [job] job monitor thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,551 | INFO     | [job] control thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,835 | INFO     | [data] control thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,883 | INFO     | [data] copytool_out thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:50,908 | INFO     | [job] queue monitor thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:51,004 | INFO     | [data] copytool_in thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:51,055 | INFO     | [payload] control thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:51,058 | INFO     | [payload] failed_post thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:51,106 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:51,273 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:44:54,126 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 22:47:12] 2025-12-16 21:45:18,966 | INFO     | PID=4087210 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:47:12] 2025-12-16 21:45:18,966 | INFO     | .. there are 57 such processes running
[2025-12-16 22:47:12] 2025-12-16 21:45:18,967 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 22:47:12] 2025-12-16 21:45:18,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 22:47:12] 2025-12-16 21:45:18,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 22:47:12] 2025-12-16 21:45:46,792 | INFO     | [monitor] cgroup control has ended
[2025-12-16 22:47:12] 2025-12-16 21:45:46,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866071705408)>', '<ExcThread(monitor, started 139865727424256)>']
[2025-12-16 22:47:12] 2025-12-16 21:45:47,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 22:47:12] 2025-12-16 21:45:47,153 | INFO     | [monitor] control thread has ended
[2025-12-16 22:47:12] 2025-12-16 21:45:51,951 | INFO     | all workflow threads have been joined
[2025-12-16 22:47:12] 2025-12-16 21:45:51,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 22:47:12] 2025-12-16 21:45:51,952 | INFO     | traces error code: 0
[2025-12-16 22:47:12] 2025-12-16 21:45:51,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 22:47:12] 2025-12-16 21:45:52,154 [wrapper] ==== pilot stdout END ====
[2025-12-16 22:47:12] 2025-12-16 21:45:52,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 22:47:12] 2025-12-16 21:45:52,191 [wrapper] pilotpid: 4087210
[2025-12-16 22:47:12] 2025-12-16 21:45:52,210 [wrapper] Pilot exit status: 0
[2025-12-16 22:47:12] 2025-12-16 21:45:52,329 [wrapper] pandaids: 6930754996
[2025-12-16 22:47:12] 2025-12-16 21:45:52,641 [wrapper] cleanup supervisor_pilot  450314 4087211
[2025-12-16 22:47:12] 2025-12-16 21:45:52,655 [wrapper] Test setup, not cleaning
[2025-12-16 22:47:12] 2025-12-16 21:45:52,674 [wrapper] apfmon messages muted
[2025-12-16 22:47:12] 2025-12-16 21:45:52,718 [wrapper] ==== wrapper stdout END ====
[2025-12-16 22:47:12] 2025-12-16 21:45:52,750 [wrapper] ==== wrapper stderr END ====
[2025-12-16 22:47:12]  *** Error codes and diagnostics ***
[2025-12-16 22:47:12]     "exeErrorCode": 0,
[2025-12-16 22:47:12]     "exeErrorDiag": "",
[2025-12-16 22:47:12]     "pilotErrorCode": 0,
[2025-12-16 22:47:12]     "pilotErrorDiag": "",
[2025-12-16 22:47:12]  *** Listing of results directory ***
[2025-12-16 22:47:12] total 377416
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc    579449 Dec 14 19:53 pilot3.tar.gz
[2025-12-16 22:47:12] -rwx------ 1 boinc boinc     36322 Dec 14 19:56 runpilot2-wrapper.sh
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc      5112 Dec 14 19:58 queuedata.json
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc       100 Dec 16 21:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 22:47:12] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 21:10 run_atlas
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc       105 Dec 16 21:10 job.xml
[2025-12-16 22:47:12] -rw-r--r-- 2 boinc boinc 197764352 Dec 16 21:10 EVNT.47898875._000040.pool.root.1
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc      6675 Dec 16 21:10 init_data.xml
[2025-12-16 22:47:12] -rw-r--r-- 2 boinc boinc     15847 Dec 16 21:10 start_atlas.sh
[2025-12-16 22:47:12] drwxrwx--x 2 boinc boinc      4096 Dec 16 21:10 shared
[2025-12-16 22:47:12] -rw-r--r-- 2 boinc boinc    592392 Dec 16 21:10 input.tar.gz
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc         0 Dec 16 21:10 boinc_lockfile
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc      2498 Dec 16 21:13 pandaJob.out
[2025-12-16 22:47:12] -rw------- 1 boinc boinc    987409 Dec 16 21:14 agis_schedconf.cvmfs.json
[2025-12-16 22:47:12] -rw------- 1 boinc boinc   1516240 Dec 16 21:14 agis_ddmendpoints.agis.ALL.json
[2025-12-16 22:47:12] drwx------ 5 boinc boinc      4096 Dec 16 21:14 pilot3
[2025-12-16 22:47:12] -rw------- 1 boinc boinc 182537897 Dec 16 22:43 HITS.47898878._002005.pool.root.1
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc       529 Dec 16 22:43 boinc_task_state.xml
[2025-12-16 22:47:12] -rw------- 1 boinc boinc      1027 Dec 16 22:43 memory_monitor_summary.json
[2025-12-16 22:47:12] -rw------- 1 boinc boinc    382070 Dec 16 22:44 log.47898878._002005.job.log.tgz.1
[2025-12-16 22:47:12] -rw------- 1 boinc boinc      7778 Dec 16 22:44 heartbeat.json
[2025-12-16 22:47:12] -rw------- 1 boinc boinc        95 Dec 16 22:45 pilot_heartbeat.json
[2025-12-16 22:47:12] -rw------- 1 boinc boinc      4827 Dec 16 22:45 pilotlog.txt
[2025-12-16 22:47:12] -rw------- 1 boinc boinc    746303 Dec 16 22:45 log.47898878._002005.job.log.1
[2025-12-16 22:47:12] -rw------- 1 boinc boinc       357 Dec 16 22:45 output.list
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc       620 Dec 16 22:45 runtime_log
[2025-12-16 22:47:12] -rw------- 1 boinc boinc   1146880 Dec 16 22:45 result.tar.gz
[2025-12-16 22:47:12] -rw------- 1 boinc boinc       663 Dec 16 22:45 RyqKDmFS6o8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwrRKDmYr3R9n.diag
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc      8880 Dec 16 22:45 runtime_log.err
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc        26 Dec 16 22:47 wrapper_checkpoint.txt
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc      8192 Dec 16 22:47 boinc_mmap_file
[2025-12-16 22:47:12] -rw-r--r-- 1 boinc boinc     22402 Dec 16 22:47 stderr.txt
[2025-12-16 22:47:12] HITS file was successfully produced:
[2025-12-16 22:47:12] -rw------- 1 boinc boinc 182537897 Dec 16 22:43 shared/HITS.pool.root.1
[2025-12-16 22:47:12]  *** Contents of shared directory: ***
[2025-12-16 22:47:12] total 373116
[2025-12-16 22:47:12] -rw-r--r-- 2 boinc boinc 197764352 Dec 16 21:10 ATLAS.root_0
[2025-12-16 22:47:12] -rw-r--r-- 2 boinc boinc     15847 Dec 16 21:10 start_atlas.sh
[2025-12-16 22:47:12] -rw-r--r-- 2 boinc boinc    592392 Dec 16 21:10 input.tar.gz
[2025-12-16 22:47:12] -rw------- 1 boinc boinc 182537897 Dec 16 22:43 HITS.pool.root.1
[2025-12-16 22:47:12] -rw------- 1 boinc boinc   1146880 Dec 16 22:45 result.tar.gz
22:47:14 (4057962): run_atlas exited; CPU time 37344.156846
22:47:14 (4057962): called boinc_finish(0)

</stderr_txt>
]]>

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