Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:48:47 (25407): wrapper (7.7.26015): starting
18:48:47 (25407): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 18:48:47] Arguments: --nthreads 8
[2025-12-16 18:48:47] Threads: 8
[2025-12-16 18:48:47] Checking for CVMFS
[2025-12-16 18:48:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 18:48:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 18:48:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 18:48:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 18:48:49] 2.11.2.0 2518 1174 63620 154081 0 60 24692850 25165824 4712 130560 0 780649 99.868 238300 1316 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 18:48:49] CVMFS is ok
[2025-12-16 18:48:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 18:48:49] Checking for apptainer binary...
[2025-12-16 18:48:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 18:48:49] Running /usr/bin/apptainer --version
[2025-12-16 18:48:49] apptainer version 1.3.2-1.el7
[2025-12-16 18:48:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 18:48:54] cg-vwn419.simple-grid.lan
[2025-12-16 18:48:54] apptainer works
[2025-12-16 18:48:54] Set ATHENA_PROC_NUMBER=8
[2025-12-16 18:48:54] Set ATHENA_CORE_NUMBER=8
[2025-12-16 18:48:55] Starting ATLAS job with PandaID=6930227115
[2025-12-16 18:48:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:16:49]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:16:49] 2025-12-16 22:16:08,139 | INFO     | PID=29191 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 23:16:49] 2025-12-16 22:16:08,139 | INFO     | .. there are 9 such processes running
[2025-12-16 23:16:49] 2025-12-16 22:16:09,142 | INFO     | time since job start (15853s) is within the limit (174528.0s)
[2025-12-16 23:16:49] 2025-12-16 22:16:09,361 | INFO     | monitor loop #1131: job 0:6930227115 is in state 'finished'
[2025-12-16 23:16:49] 2025-12-16 22:16:09,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,671 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 23:16:49] 2025-12-16 22:16:10,672 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-16 23:16:49] 2025-12-16 22:16:10,674 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6930227115/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,674 | INFO     | extracted standard info from prmon json
[2025-12-16 23:16:49] 2025-12-16 22:16:10,675 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 23:16:49] 2025-12-16 22:16:10,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 23:16:49] 2025-12-16 22:16:10,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 23:16:49] 2025-12-16 22:16:10,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 23:16:49] 2025-12-16 22:16:10,680 | INFO     | fitting pss+swap vs Time
[2025-12-16 23:16:49] 2025-12-16 22:16:10,681 | INFO     | sum of square deviations: 4962187923.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,683 | INFO     | sum of deviations: 63782871636.500015
[2025-12-16 23:16:49] 2025-12-16 22:16:10,683 | INFO     | mean x: 1765915639.5
[2025-12-16 23:16:49] 2025-12-16 22:16:10,683 | INFO     | mean y: 2427790.1865079366
[2025-12-16 23:16:49] 2025-12-16 22:16:10,684 | INFO     | intersect: -22696263251.53048
[2025-12-16 23:16:49] 2025-12-16 22:16:10,684 | INFO     | chi2: 4.085467961265705
[2025-12-16 23:16:49] 2025-12-16 22:16:10,685 | INFO     | sum of square deviations: 4672638308.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,687 | INFO     | sum of deviations: 78675298939.0001
[2025-12-16 23:16:49] 2025-12-16 22:16:10,687 | INFO     | mean x: 1765915487.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,687 | INFO     | mean y: 2435493.004048583
[2025-12-16 23:16:49] 2025-12-16 22:16:10,687 | INFO     | intersect: -29731072577.343895
[2025-12-16 23:16:49] 2025-12-16 22:16:10,687 | INFO     | chi2: 3.3280704702812667
[2025-12-16 23:16:49] 2025-12-16 22:16:10,688 | INFO     | current chi2=3.3280704702812667 (change=18.5388185188409 %)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,688 | INFO     | right removable region: 246
[2025-12-16 23:16:49] 2025-12-16 22:16:10,688 | INFO     | sum of square deviations: 4672638308.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,690 | INFO     | sum of deviations: -6955898381.000002
[2025-12-16 23:16:49] 2025-12-16 22:16:10,690 | INFO     | mean x: 1765915792.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,691 | INFO     | mean y: 2464941.4696356277
[2025-12-16 23:16:49] 2025-12-16 22:16:10,691 | INFO     | intersect: 2631286174.545726
[2025-12-16 23:16:49] 2025-12-16 22:16:10,691 | INFO     | chi2: 0.8959853295204608
[2025-12-16 23:16:49] 2025-12-16 22:16:10,691 | INFO     | current chi2=0.8959853295204608 (change=78.06896693315693 %)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,692 | INFO     | sum of square deviations: 4394577280.5
[2025-12-16 23:16:49] 2025-12-16 22:16:10,694 | INFO     | sum of deviations: -12129716288.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,694 | INFO     | mean x: 1765915944.5
[2025-12-16 23:16:49] 2025-12-16 22:16:10,694 | INFO     | mean y: 2467724.5785123967
[2025-12-16 23:16:49] 2025-12-16 22:16:10,694 | INFO     | intersect: 4876670185.481294
[2025-12-16 23:16:49] 2025-12-16 22:16:10,694 | INFO     | chi2: 0.8346845752200469
[2025-12-16 23:16:49] 2025-12-16 22:16:10,695 | INFO     | current chi2=0.8346845752200469 (change=6.84171406391471 %)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,695 | INFO     | left removable region: 20
[2025-12-16 23:16:49] 2025-12-16 22:16:10,695 | INFO     | sum of square deviations: 3579276412.5
[2025-12-16 23:16:49] 2025-12-16 22:16:10,697 | INFO     | sum of deviations: 8081991260.0
[2025-12-16 23:16:49] 2025-12-16 22:16:10,697 | INFO     | mean x: 1765916066.5
[2025-12-16 23:16:49] 2025-12-16 22:16:10,697 | INFO     | mean y: 2473896.3805309734
[2025-12-16 23:16:49] 2025-12-16 22:16:10,697 | INFO     | intersect: -3984957240.679376
[2025-12-16 23:16:49] 2025-12-16 22:16:10,698 | INFO     | chi2: 0.0006739555876121443
[2025-12-16 23:16:49] 2025-12-16 22:16:10,698 | INFO     | current memory leak: 2.26 B/s (using 226 data points, chi2=0.00)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | ..............................
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . Timing measurements:
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . get job = 0 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . initial setup = 9 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . payload setup = 133 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . stage-in = 0 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . payload execution = 15477 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . stage-out = 2 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,699 | INFO     | . log creation = 0 s
[2025-12-16 23:16:49] 2025-12-16 22:16:10,700 | INFO     | ..............................
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | 
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | job summary report
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | --------------------------------------------------
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | PanDA job id: 6930227115
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | task id: 47886933
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | errors: (none)
[2025-12-16 23:16:49] 2025-12-16 22:16:11,119 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | pilot state: finished 
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | transexitcode: 0
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | exeerrorcode: 0
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | exeerrordiag: 
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | exitcode: 0
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | exitmsg: OK
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | cpuconsumptiontime: 58914 s
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | nevents: 400
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | neventsw: 0
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | pid: 3417
[2025-12-16 23:16:49] 2025-12-16 22:16:11,120 | INFO     | pgrp: 3417
[2025-12-16 23:16:49] 2025-12-16 22:16:11,121 | INFO     | corecount: 8
[2025-12-16 23:16:49] 2025-12-16 22:16:11,121 | INFO     | event service: False
[2025-12-16 23:16:49] 2025-12-16 22:16:11,121 | INFO     | sizes: {0: 2283137, 1: 2283823, 2: 2283851, 12: 2284022, 23: 2284050, 34: 2284078, 45: 2284234, 55: 2284262, 66: 2284290, 77: 2284318, 85: 2284636, 87: 2284944, 15
[2025-12-16 23:16:49] 2025-12-16 22:16:11,121 | INFO     | --------------------------------------------------
[2025-12-16 23:16:49] 2025-12-16 22:16:11,121 | INFO     | 
[2025-12-16 23:16:49] 2025-12-16 22:16:11,121 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-12-16 23:16:49] 2025-12-16 22:16:11,149 | INFO     | time since job start (15855s) is within the limit (174528.0s)
[2025-12-16 23:16:49] 2025-12-16 22:16:11,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | job 6930227115 has completed (purged errors)
[2025-12-16 23:16:49] 2025-12-16 22:16:11,630 | INFO     | overall cleanup function is called
[2025-12-16 23:16:49] 2025-12-16 22:16:12,638 | INFO     | --- collectZombieJob: --- 10, [3417]
[2025-12-16 23:16:49] 2025-12-16 22:16:12,638 | INFO     | zombie collector waiting for pid 3417
[2025-12-16 23:16:49] 2025-12-16 22:16:12,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:16:49] 2025-12-16 22:16:12,638 | INFO     | collected zombie processes
[2025-12-16 23:16:49] 2025-12-16 22:16:12,638 | INFO     | will attempt to kill all subprocesses of pid=3417
[2025-12-16 23:16:49] 2025-12-16 22:16:12,740 | INFO     | process IDs to be killed: [3417] (in reverse order)
[2025-12-16 23:16:49] 2025-12-16 22:16:13,230 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:16:49] 2025-12-16 22:16:13,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:16:49] 2025-12-16 22:16:13,234 | INFO     | did not find any defunct processes belonging to 3417
[2025-12-16 23:16:49] 2025-12-16 22:16:13,238 | INFO     | did not find any defunct processes belonging to 3417
[2025-12-16 23:16:49] 2025-12-16 22:16:13,238 | INFO     | ready for new job
[2025-12-16 23:16:49] 2025-12-16 22:16:13,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:16:49] 2025-12-16 22:16:13,240 | INFO     | ***************************************
[2025-12-16 23:16:49] 2025-12-16 22:16:13,240 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:16:49] 2025-12-16 22:16:13,240 | INFO     | ***************************************
[2025-12-16 23:16:49] 2025-12-16 22:16:13,240 | INFO     | 
[2025-12-16 23:16:49] 2025-12-16 22:16:13,241 | INFO     | pilot is running in a VM
[2025-12-16 23:16:49] 2025-12-16 22:16:13,241 | INFO     | architecture information:
[2025-12-16 23:16:49] 2025-12-16 22:16:13,249 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:16:49] 2025-12-16 22:16:13,428 | INFO     | cat /etc/os-release:
[2025-12-16 23:16:49] NAME="CentOS Linux"
[2025-12-16 23:16:49] VERSION="7 (Core)"
[2025-12-16 23:16:49] ID="centos"
[2025-12-16 23:16:49] ID_LIKE="rhel fedora"
[2025-12-16 23:16:49] VERSION_ID="7"
[2025-12-16 23:16:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:16:49] ANSI_COLOR="0;31"
[2025-12-16 23:16:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:16:49] HOME_URL="https://www.centos.org/"
[2025-12-16 23:16:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:16:49] 
[2025-12-16 23:16:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:16:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:16:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:16:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:16:49] 
[2025-12-16 23:16:49] 2025-12-16 22:16:13,428 | INFO     | ***************************************
[2025-12-16 23:16:49] 2025-12-16 22:16:13,931 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-12-16 23:16:49] 2025-12-16 22:16:14,217 | INFO     | sufficient remaining disk space (495007563776 B)
[2025-12-16 23:16:49] 2025-12-16 22:16:14,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:16:49] 2025-12-16 22:16:14,217 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:16:49] 2025-12-16 22:16:14,217 | INFO     | update_server=False
[2025-12-16 23:16:49] 2025-12-16 22:16:14,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:16:49] 2025-12-16 22:16:14,279 | INFO     | all job control threads have been joined
[2025-12-16 23:16:49] 2025-12-16 22:16:14,379 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 23:16:49] 2025-12-16 22:16:14,379 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 23:16:49] 2025-12-16 22:16:14,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:16:49] 2025-12-16 22:16:14,379 | INFO     | will abort loop
[2025-12-16 23:16:49] 2025-12-16 22:16:14,898 | INFO     | all payload control threads have been joined
[2025-12-16 23:16:49] 2025-12-16 22:16:15,191 | INFO     | all data control threads have been joined
[2025-12-16 23:16:49] 2025-12-16 22:16:15,224 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,285 | INFO     | [job] control thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,321 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,385 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,601 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:16:49] 2025-12-16 22:16:15,648 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,779 | INFO     | [job] validate thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,789 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:15,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:16:49] 2025-12-16 22:16:15,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:16:49] 2025-12-16 22:16:15,905 | INFO     | [payload] control thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:16,087 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:16,196 | INFO     | [data] control thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:16,726 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:16,837 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:17,611 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:19,870 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:16:49] 2025-12-16 22:16:23,391 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:16:49] 2025-12-16 22:16:24,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480223762240)>', '<ExcThread(monitor, started 140479177942784)>']
[2025-12-16 23:16:49] 2025-12-16 22:16:29,603 | INFO     | all workflow threads have been joined
[2025-12-16 23:16:49] 2025-12-16 22:16:29,603 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:16:49] 2025-12-16 22:16:29,603 | INFO     | traces error code: 0
[2025-12-16 23:16:49] 2025-12-16 22:16:29,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:16:49] 2025-12-16 22:16:44,452 | INFO     | PID=29191 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 23:16:49] 2025-12-16 22:16:44,452 | INFO     | .. there are 9 such processes running
[2025-12-16 23:16:49] 2025-12-16 22:16:44,452 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:16:49] 2025-12-16 22:16:44,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:16:49] 2025-12-16 22:16:44,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:16:49] 2025-12-16 22:16:44,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:16:49] 2025-12-16 22:16:44,453 | INFO     | [monitor] control thread has ended
[2025-12-16 23:16:49] 2025-12-16 22:16:44,649 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:16:49] 2025-12-16 22:16:44,656 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:16:49] 2025-12-16 22:16:44,659 [wrapper] pilotpid: 29191
[2025-12-16 23:16:49] 2025-12-16 22:16:44,711 [wrapper] Pilot exit status: 0
[2025-12-16 23:16:49] 2025-12-16 22:16:45,119 [wrapper] pandaids: 6930227115
[2025-12-16 23:16:49] 2025-12-16 22:16:46,144 [wrapper] cleanup supervisor_pilot 14169 29192
[2025-12-16 23:16:49] 2025-12-16 22:16:46,194 [wrapper] Test setup, not cleaning
[2025-12-16 23:16:49] 2025-12-16 22:16:46,314 [wrapper] apfmon messages muted
[2025-12-16 23:16:49] 2025-12-16 22:16:46,471 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:16:49] 2025-12-16 22:16:46,599 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:16:49]  *** Error codes and diagnostics ***
[2025-12-16 23:16:49]     "exeErrorCode": 0,
[2025-12-16 23:16:49]     "exeErrorDiag": "",
[2025-12-16 23:16:49]     "pilotErrorCode": 0,
[2025-12-16 23:16:49]     "pilotErrorDiag": "",
[2025-12-16 23:16:49]  *** Listing of results directory ***
[2025-12-16 23:16:49] total 339676
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc    579449 Dec 16 00:23 pilot3.tar.gz
[2025-12-16 23:16:49] -rwx------. 1 boinc boinc     36322 Dec 16 00:25 runpilot2-wrapper.sh
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc      5112 Dec 16 00:26 queuedata.json
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc       100 Dec 16 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:16:49] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 18:48 run_atlas
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc       105 Dec 16 18:48 job.xml
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc      6392 Dec 16 18:48 init_data.xml
[2025-12-16 23:16:49] -rw-r--r--. 2 boinc boinc 191656282 Dec 16 18:48 EVNT.47886929._000314.pool.root.1
[2025-12-16 23:16:49] -rw-r--r--. 2 boinc boinc     15847 Dec 16 18:48 start_atlas.sh
[2025-12-16 23:16:49] drwxrwx--x. 2 boinc boinc        68 Dec 16 18:48 shared
[2025-12-16 23:16:49] -rw-r--r--. 2 boinc boinc    592393 Dec 16 18:48 input.tar.gz
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc         0 Dec 16 18:48 boinc_lockfile
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc      2513 Dec 16 18:48 pandaJob.out
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc    987401 Dec 16 18:51 agis_schedconf.cvmfs.json
[2025-12-16 23:16:49] drwx------. 5 boinc boinc      4096 Dec 16 18:51 pilot3
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc 147087933 Dec 16 23:14 HITS.47886933._006033.pool.root.1
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc      1028 Dec 16 23:15 memory_monitor_summary.json
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc       531 Dec 16 23:15 boinc_task_state.xml
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc   1516240 Dec 16 23:15 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc    468638 Dec 16 23:15 log.47886933._006033.job.log.tgz.1
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc      7772 Dec 16 23:16 heartbeat.json
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc        95 Dec 16 23:16 pilot_heartbeat.json
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc        28 Dec 16 23:16 wrapper_checkpoint.txt
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc       820 Dec 16 23:16 pilotlog.txt
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc      8192 Dec 16 23:16 boinc_mmap_file
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc   2124619 Dec 16 23:16 log.47886933._006033.job.log.1
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc       357 Dec 16 23:16 output.list
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc       620 Dec 16 23:16 runtime_log
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc   2611200 Dec 16 23:16 result.tar.gz
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc       656 Dec 16 23:16 T70KDmX7Wp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjTUKDmMsBMYo.diag
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc      8833 Dec 16 23:16 runtime_log.err
[2025-12-16 23:16:49] -rw-r--r--. 1 boinc boinc     21038 Dec 16 23:16 stderr.txt
[2025-12-16 23:16:49] HITS file was successfully produced:
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc 147087933 Dec 16 23:14 shared/HITS.pool.root.1
[2025-12-16 23:16:49]  *** Contents of shared directory: ***
[2025-12-16 23:16:49] total 333960
[2025-12-16 23:16:49] -rw-r--r--. 2 boinc boinc 191656282 Dec 16 18:48 ATLAS.root_0
[2025-12-16 23:16:49] -rw-r--r--. 2 boinc boinc     15847 Dec 16 18:48 start_atlas.sh
[2025-12-16 23:16:49] -rw-r--r--. 2 boinc boinc    592393 Dec 16 18:48 input.tar.gz
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc 147087933 Dec 16 23:14 HITS.pool.root.1
[2025-12-16 23:16:49] -rw-------. 1 boinc boinc   2611200 Dec 16 23:16 result.tar.gz
23:16:51 (25407): run_atlas exited; CPU time 59146.011209
23:16:51 (25407): called boinc_finish(0)

</stderr_txt>
]]>

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