Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:40:07 (9903): wrapper (7.7.26015): starting
04:40:07 (9903): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 04:40:07] Arguments: --nthreads 8
[2025-12-16 04:40:07] Threads: 8
[2025-12-16 04:40:07] Checking for CVMFS
[2025-12-16 04:40:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 04:40:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 04:40:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 04:40:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 04:40:07] 2.11.2.0 2934 205456 82724 154065 0 56 14040942 20275201 1 130560 1 75335302 99.941 9924699 24479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 04:40:07] CVMFS is ok
[2025-12-16 04:40:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 04:40:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 04:40:07] Further information can be found at the LHC@home message board.
[2025-12-16 04:40:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 04:40:07] Checking for apptainer binary...
[2025-12-16 04:40:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 04:40:07] Running /usr/bin/apptainer --version
[2025-12-16 04:40:07] apptainer version 1.3.2-1.el7
[2025-12-16 04:40:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 04:40:09] c-204-33.aglt2.org
[2025-12-16 04:40:09] apptainer works
[2025-12-16 04:40:09] Set ATHENA_PROC_NUMBER=8
[2025-12-16 04:40:09] Set ATHENA_CORE_NUMBER=8
[2025-12-16 04:40:09] Starting ATLAS job with PandaID=6930227201
[2025-12-16 04:40:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:59:46]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:59:46] 2025-12-16 11:59:06,627 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 06:59:46] 2025-12-16 11:59:06,635 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-12-16 06:59:46] 2025-12-16 11:59:06,637 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930227201/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,638 | INFO     | extracted standard info from prmon json
[2025-12-16 06:59:46] 2025-12-16 11:59:06,639 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 06:59:46] 2025-12-16 11:59:06,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 06:59:46] 2025-12-16 11:59:06,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 06:59:46] 2025-12-16 11:59:06,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 06:59:46] 2025-12-16 11:59:06,643 | INFO     | fitting pss+swap vs Time
[2025-12-16 06:59:46] 2025-12-16 11:59:06,644 | INFO     | sum of square deviations: 779958810.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,644 | INFO     | sum of deviations: -1843758153.4999998
[2025-12-16 06:59:46] 2025-12-16 11:59:06,645 | INFO     | mean x: 1765882176.5
[2025-12-16 06:59:46] 2025-12-16 11:59:06,645 | INFO     | mean y: 2512612.1397058824
[2025-12-16 06:59:46] 2025-12-16 11:59:06,645 | INFO     | intersect: 4176912105.161908
[2025-12-16 06:59:46] 2025-12-16 11:59:06,645 | INFO     | chi2: 1.557335940787763
[2025-12-16 06:59:46] 2025-12-16 11:59:06,646 | INFO     | sum of square deviations: 697054930.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,646 | INFO     | sum of deviations: -1533898191.9999933
[2025-12-16 06:59:46] 2025-12-16 11:59:06,646 | INFO     | mean x: 1765882024.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,647 | INFO     | mean y: 2513182.427480916
[2025-12-16 06:59:46] 2025-12-16 11:59:06,647 | INFO     | intersect: 3888409583.5889916
[2025-12-16 06:59:46] 2025-12-16 11:59:06,647 | INFO     | chi2: 1.5577996330021389
[2025-12-16 06:59:46] 2025-12-16 11:59:06,647 | INFO     | current chi2=1.5577996330021389 (change=-0.029774707064255345 %)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,647 | INFO     | right removable region: 130
[2025-12-16 06:59:46] 2025-12-16 11:59:06,648 | INFO     | sum of square deviations: 697054930.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,648 | INFO     | sum of deviations: -21205567433.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,648 | INFO     | mean x: 1765882329.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,648 | INFO     | mean y: 2547600.4427480916
[2025-12-16 06:59:46] 2025-12-16 11:59:06,649 | INFO     | intersect: 53723617769.6941
[2025-12-16 06:59:46] 2025-12-16 11:59:06,649 | INFO     | chi2: 0.15171258382817382
[2025-12-16 06:59:46] 2025-12-16 11:59:06,649 | INFO     | current chi2=0.15171258382817382 (change=90.25819799988489 %)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,649 | INFO     | sum of square deviations: 620244187.5
[2025-12-16 06:59:46] 2025-12-16 11:59:06,650 | INFO     | sum of deviations: -20300871370.000004
[2025-12-16 06:59:46] 2025-12-16 11:59:06,650 | INFO     | mean x: 1765882481.5
[2025-12-16 06:59:46] 2025-12-16 11:59:06,650 | INFO     | mean y: 2545691.126984127
[2025-12-16 06:59:46] 2025-12-16 11:59:06,650 | INFO     | intersect: 57800673966.96497
[2025-12-16 06:59:46] 2025-12-16 11:59:06,651 | INFO     | chi2: 0.1323578992861474
[2025-12-16 06:59:46] 2025-12-16 11:59:06,651 | INFO     | current chi2=0.1323578992861474 (change=12.757468137216014 %)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,651 | INFO     | left removable region: 20
[2025-12-16 06:59:46] 2025-12-16 11:59:06,651 | INFO     | sum of square deviations: 412686807.5
[2025-12-16 06:59:46] 2025-12-16 11:59:06,652 | INFO     | sum of deviations: -11543284004.0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,652 | INFO     | mean x: 1765882603.5
[2025-12-16 06:59:46] 2025-12-16 11:59:06,652 | INFO     | mean y: 2529061.2363636363
[2025-12-16 06:59:46] 2025-12-16 11:59:06,652 | INFO     | intersect: 49396122555.07109
[2025-12-16 06:59:46] 2025-12-16 11:59:06,652 | INFO     | chi2: 0.11096560596266457
[2025-12-16 06:59:46] 2025-12-16 11:59:06,653 | INFO     | current memory leak: -27.97 B/s (using 110 data points, chi2=0.11)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,653 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,653 | INFO     | ..............................
[2025-12-16 06:59:46] 2025-12-16 11:59:06,653 | INFO     | . Timing measurements:
[2025-12-16 06:59:46] 2025-12-16 11:59:06,653 | INFO     | . get job = 0 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,653 | INFO     | . initial setup = 2 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,654 | INFO     | . payload setup = 8 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,654 | INFO     | . stage-in = 0 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,654 | INFO     | . payload execution = 8281 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,654 | INFO     | . stage-out = 0 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,654 | INFO     | . log creation = 0 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,654 | INFO     | ..............................
[2025-12-16 06:59:46] 2025-12-16 11:59:06,655 | INFO     | sufficient remaining disk space (18663604224 B)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,666 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,751 | INFO     | 
[2025-12-16 06:59:46] 2025-12-16 11:59:06,752 | INFO     | job summary report
[2025-12-16 06:59:46] 2025-12-16 11:59:06,752 | INFO     | --------------------------------------------------
[2025-12-16 06:59:46] 2025-12-16 11:59:06,752 | INFO     | PanDA job id: 6930227201
[2025-12-16 06:59:46] 2025-12-16 11:59:06,752 | INFO     | task id: 47886933
[2025-12-16 06:59:46] 2025-12-16 11:59:06,753 | INFO     | errors: (none)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,753 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 06:59:46] 2025-12-16 11:59:06,753 | INFO     | pilot state: finished 
[2025-12-16 06:59:46] 2025-12-16 11:59:06,753 | INFO     | transexitcode: 0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,754 | INFO     | exeerrorcode: 0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,754 | INFO     | exeerrordiag: 
[2025-12-16 06:59:46] 2025-12-16 11:59:06,754 | INFO     | exitcode: 0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,754 | INFO     | exitmsg: OK
[2025-12-16 06:59:46] 2025-12-16 11:59:06,754 | INFO     | cpuconsumptiontime: 61943 s
[2025-12-16 06:59:46] 2025-12-16 11:59:06,755 | INFO     | nevents: 400
[2025-12-16 06:59:46] 2025-12-16 11:59:06,755 | INFO     | neventsw: 0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,755 | INFO     | pid: 19937
[2025-12-16 06:59:46] 2025-12-16 11:59:06,755 | INFO     | pgrp: 19937
[2025-12-16 06:59:46] 2025-12-16 11:59:06,755 | INFO     | corecount: 8
[2025-12-16 06:59:46] 2025-12-16 11:59:06,756 | INFO     | event service: False
[2025-12-16 06:59:46] 2025-12-16 11:59:06,756 | INFO     | sizes: {0: 2283965, 6: 2284227, 11: 2284255, 8292: 2312043, 8293: 2321041, 8294: 2321097, 8302: 2321419}
[2025-12-16 06:59:46] 2025-12-16 11:59:06,756 | INFO     | --------------------------------------------------
[2025-12-16 06:59:46] 2025-12-16 11:59:06,756 | INFO     | 
[2025-12-16 06:59:46] 2025-12-16 11:59:06,756 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 06:59:46] 2025-12-16 11:59:06,760 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6930227201: 3780115 B (within 2768240640 B limit)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,761 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6930227201/HITS.47886933._006119.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,761 | INFO     | total size of present files: 0 B (workdir size: 3780115 B)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,761 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6930227201/HITS.47886933._006119.pool.root.1 since it does not exist
[2025-12-16 06:59:46] 2025-12-16 11:59:06,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,788 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,788 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 06:59:46] 2025-12-16 11:59:06,789 | INFO     | job 6930227201 has completed (purged errors)
[2025-12-16 06:59:46] 2025-12-16 11:59:06,789 | INFO     | overall cleanup function is called
[2025-12-16 06:59:46] 2025-12-16 11:59:06,860 | INFO     | number of running child processes to parent process 19937: 1
[2025-12-16 06:59:46] 2025-12-16 11:59:06,860 | INFO     | maximum number of monitored processes: 6
[2025-12-16 06:59:46] 2025-12-16 11:59:06,868 | INFO     | aborting job monitoring since job object (job id=6930227201) has expired
[2025-12-16 06:59:46] 2025-12-16 11:59:07,797 | INFO     | --- collectZombieJob: --- 10, [19937]
[2025-12-16 06:59:46] 2025-12-16 11:59:07,798 | INFO     | zombie collector waiting for pid 19937
[2025-12-16 06:59:46] 2025-12-16 11:59:07,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 06:59:46] 2025-12-16 11:59:07,798 | INFO     | collected zombie processes
[2025-12-16 06:59:46] 2025-12-16 11:59:07,798 | INFO     | will attempt to kill all subprocesses of pid=19937
[2025-12-16 06:59:46] 2025-12-16 11:59:07,887 | INFO     | process IDs to be killed: [19937] (in reverse order)
[2025-12-16 06:59:46] 2025-12-16 11:59:07,945 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 06:59:46] 2025-12-16 11:59:07,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 06:59:46] 2025-12-16 11:59:07,950 | INFO     | did not find any defunct processes belonging to 19937
[2025-12-16 06:59:46] 2025-12-16 11:59:07,954 | INFO     | did not find any defunct processes belonging to 19937
[2025-12-16 06:59:46] 2025-12-16 11:59:07,955 | INFO     | ready for new job
[2025-12-16 06:59:46] 2025-12-16 11:59:07,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 06:59:46] 2025-12-16 11:59:07,957 | INFO     | ***************************************
[2025-12-16 06:59:46] 2025-12-16 11:59:07,957 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 06:59:46] 2025-12-16 11:59:07,957 | INFO     | ***************************************
[2025-12-16 06:59:46] 2025-12-16 11:59:07,957 | INFO     | 
[2025-12-16 06:59:46] 2025-12-16 11:59:07,958 | INFO     | architecture information:
[2025-12-16 06:59:46] 2025-12-16 11:59:07,958 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:59:46] 2025-12-16 11:59:07,975 | INFO     | cat /etc/os-release:
[2025-12-16 06:59:46] NAME="CentOS Linux"
[2025-12-16 06:59:46] VERSION="7 (Core)"
[2025-12-16 06:59:46] ID="centos"
[2025-12-16 06:59:46] ID_LIKE="rhel fedora"
[2025-12-16 06:59:46] VERSION_ID="7"
[2025-12-16 06:59:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:59:46] ANSI_COLOR="0;31"
[2025-12-16 06:59:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:59:46] HOME_URL="https://www.centos.org/"
[2025-12-16 06:59:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:59:46] 
[2025-12-16 06:59:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:59:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:59:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:59:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:59:46] 
[2025-12-16 06:59:46] 2025-12-16 11:59:07,976 | INFO     | ***************************************
[2025-12-16 06:59:46] 2025-12-16 11:59:08,479 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 06:59:46] 2025-12-16 11:59:08,498 | INFO     | sufficient remaining disk space (18668847104 B)
[2025-12-16 06:59:46] 2025-12-16 11:59:08,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:59:46] 2025-12-16 11:59:08,499 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:59:46] 2025-12-16 11:59:08,499 | INFO     | update_server=False
[2025-12-16 06:59:46] 2025-12-16 11:59:08,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:59:46] 2025-12-16 11:59:08,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:59:46] 2025-12-16 11:59:08,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:59:46] 2025-12-16 11:59:08,501 | INFO     | aborting loop
[2025-12-16 06:59:46] 2025-12-16 11:59:08,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:59:46] 2025-12-16 11:59:08,998 | INFO     | all data control threads have been joined
[2025-12-16 06:59:46] 2025-12-16 11:59:09,132 | INFO     | all job control threads have been joined
[2025-12-16 06:59:46] 2025-12-16 11:59:09,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:59:46] 2025-12-16 11:59:09,505 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:09,506 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:09,507 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:09,548 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:09,632 | INFO     | all payload control threads have been joined
[2025-12-16 06:59:46] 2025-12-16 11:59:09,786 | INFO     | [job] validate thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,003 | INFO     | [data] control thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,137 | INFO     | [job] control thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,273 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,444 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,466 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,582 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,633 | INFO     | [payload] control thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,640 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:10,774 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:13,329 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:18,804 | INFO     | job.realtimelogging is not enabled
[2025-12-16 06:59:46] 2025-12-16 11:59:19,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:59:46] 2025-12-16 11:59:38,838 | INFO     | PID=13576 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 06:59:46] 2025-12-16 11:59:38,839 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:59:46] 2025-12-16 11:59:38,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:59:46] 2025-12-16 11:59:38,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:59:46] 2025-12-16 11:59:40,479 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:59:46] 2025-12-16 11:59:40,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695159498560)>', '<ExcThread(monitor, started 140694035347200)>']
[2025-12-16 06:59:46] 2025-12-16 11:59:40,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:59:46] 2025-12-16 11:59:40,848 | INFO     | [monitor] control thread has ended
[2025-12-16 06:59:46] 2025-12-16 11:59:45,677 | INFO     | all workflow threads have been joined
[2025-12-16 06:59:46] 2025-12-16 11:59:45,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:59:46] 2025-12-16 11:59:45,678 | INFO     | traces error code: 0
[2025-12-16 06:59:46] 2025-12-16 11:59:45,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:59:46] 2025-12-16 11:59:45,780 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:59:46] 2025-12-16 11:59:45,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:59:46] 2025-12-16 11:59:45,788 [wrapper] pilotpid: 13576
[2025-12-16 06:59:46] 2025-12-16 11:59:45,793 [wrapper] Pilot exit status: 0
[2025-12-16 06:59:46] 2025-12-16 11:59:45,812 [wrapper] pandaids: 6930227201
[2025-12-16 06:59:46] 2025-12-16 11:59:45,857 [wrapper] cleanup supervisor_pilot 20636 13577
[2025-12-16 06:59:46] 2025-12-16 11:59:45,862 [wrapper] Test setup, not cleaning
[2025-12-16 06:59:46] 2025-12-16 11:59:45,867 [wrapper] apfmon messages muted
[2025-12-16 06:59:46] 2025-12-16 11:59:45,871 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:59:46] 2025-12-16 11:59:45,876 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:59:46]  *** Error codes and diagnostics ***
[2025-12-16 06:59:46]     "exeErrorCode": 0,
[2025-12-16 06:59:46]     "exeErrorDiag": "",
[2025-12-16 06:59:46]     "pilotErrorCode": 0,
[2025-12-16 06:59:46]     "pilotErrorDiag": "",
[2025-12-16 06:59:46]  *** Listing of results directory ***
[2025-12-16 06:59:46] total 346696
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 18:23 pilot3.tar.gz
[2025-12-16 06:59:46] -rwx------ 1 boincer umatlas     36322 Dec 15 18:25 runpilot2-wrapper.sh
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 18:26 queuedata.json
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas       100 Dec 16 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:59:46] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 04:40 run_atlas
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas       105 Dec 16 04:40 job.xml
[2025-12-16 06:59:46] -rw-r--r-- 2 boincer umatlas 193833378 Dec 16 04:40 EVNT.47886929._000317.pool.root.1
[2025-12-16 06:59:46] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 04:40 start_atlas.sh
[2025-12-16 06:59:46] drwxrwx--x 2 boincer umatlas      4096 Dec 16 04:40 shared
[2025-12-16 06:59:46] -rw-r--r-- 2 boincer umatlas    592398 Dec 16 04:40 input.tar.gz
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas         0 Dec 16 04:40 boinc_lockfile
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas      2513 Dec 16 04:40 pandaJob.out
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas        57 Dec 16 04:40 setup.sh.local
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas    994525 Dec 16 04:40 agis_schedconf.cvmfs.json
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas   1516240 Dec 16 04:40 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:59:46] drwx------ 5 boincer umatlas      4096 Dec 16 04:40 pilot3
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas      5910 Dec 16 06:54 init_data.xml
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas 154162651 Dec 16 06:58 HITS.47886933._006119.pool.root.1
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas      1048 Dec 16 06:58 memory_monitor_summary.json
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas    382716 Dec 16 06:58 log.47886933._006119.job.log.tgz.1
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas       530 Dec 16 06:58 boinc_task_state.xml
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas      7843 Dec 16 06:59 heartbeat.json
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 06:59 boinc_mmap_file
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas        27 Dec 16 06:59 wrapper_checkpoint.txt
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas        95 Dec 16 06:59 pilot_heartbeat.json
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas      4818 Dec 16 06:59 pilotlog.txt
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas   1164100 Dec 16 06:59 log.47886933._006119.job.log.1
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas       357 Dec 16 06:59 output.list
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas       620 Dec 16 06:59 runtime_log
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas   1566720 Dec 16 06:59 result.tar.gz
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas      9342 Dec 16 06:59 runtime_log.err
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas       660 Dec 16 06:59 oMiMDme7Wp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3vYKDmgvO0Lm.diag
[2025-12-16 06:59:46] -rw-r--r-- 1 boincer umatlas     21453 Dec 16 06:59 stderr.txt
[2025-12-16 06:59:46] HITS file was successfully produced:
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas 154162651 Dec 16 06:58 shared/HITS.pool.root.1
[2025-12-16 06:59:46]  *** Contents of shared directory: ***
[2025-12-16 06:59:46] total 341980
[2025-12-16 06:59:46] -rw-r--r-- 2 boincer umatlas 193833378 Dec 16 04:40 ATLAS.root_0
[2025-12-16 06:59:46] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 04:40 start_atlas.sh
[2025-12-16 06:59:46] -rw-r--r-- 2 boincer umatlas    592398 Dec 16 04:40 input.tar.gz
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas 154162651 Dec 16 06:58 HITS.pool.root.1
[2025-12-16 06:59:46] -rw------- 1 boincer umatlas   1566720 Dec 16 06:59 result.tar.gz
06:59:47 (9903): run_atlas exited; CPU time 61901.170662
06:59:47 (9903): called boinc_finish(0)

</stderr_txt>
]]>

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