Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:40:12 (15602): wrapper (7.7.26015): starting
04:40:12 (15602): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 04:40:12] Arguments: --nthreads 12
[2025-12-16 04:40:12] Threads: 12
[2025-12-16 04:40:12] Checking for CVMFS
[2025-12-16 04:40:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 04:40:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 04:40:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 04:40:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 04:40:13] 2.11.2.0 2984 316267 91924 154065 1 59 17169462 20275201 1 130560 1 141132361 99.974 17746983 14928 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 04:40:13] CVMFS is ok
[2025-12-16 04:40:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 04:40:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 04:40:13] Further information can be found at the LHC@home message board.
[2025-12-16 04:40:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 04:40:13] Checking for apptainer binary...
[2025-12-16 04:40:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 04:40:13] Running /usr/bin/apptainer --version
[2025-12-16 04:40:13] apptainer version 1.3.2-1.el7
[2025-12-16 04:40:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 04:40:14] c-205-26.aglt2.org
[2025-12-16 04:40:14] apptainer works
[2025-12-16 04:40:14] Set ATHENA_PROC_NUMBER=12
[2025-12-16 04:40:14] Set ATHENA_CORE_NUMBER=12
[2025-12-16 04:40:14] Starting ATLAS job with PandaID=6930226131
[2025-12-16 04:40:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:00:43]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:00:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 06:00:43]  replicas=None
[2025-12-16 06:00:43]  scope=mc23_13p6TeV
[2025-12-16 06:00:43]  status=None
[2025-12-16 06:00:43]  status_code=0
[2025-12-16 06:00:43]  storage_token=
[2025-12-16 06:00:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6930226131/log.47886933._005990.job.log.tgz.1
[2025-12-16 06:00:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/9f/log.47886933._005990.job.log.tgz.1
[2025-12-16 06:00:43]  workdir=None
[2025-12-16 06:00:43] ]
[2025-12-16 06:00:43] 2025-12-16 10:59:59,632 | INFO     | transferring file log.47886933._005990.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6930226131/log.47886933._005990.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 06:00:43] 2025-12-16 10:59:59,633 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6930226131/log.47886933._005990.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886933._005990.job
[2025-12-16 06:00:43] 2025-12-16 10:59:59,656 | INFO     | adding to output.list: log.47886933._005990.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/9f/log.47886933._005990.job.log.tg
[2025-12-16 06:00:43] 2025-12-16 10:59:59,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 06:00:43] 2025-12-16 10:59:59,658 | INFO     | summary of transferred files:
[2025-12-16 06:00:43] 2025-12-16 10:59:59,658 | INFO     |  -- lfn=log.47886933._005990.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 06:00:43] 2025-12-16 10:59:59,658 | INFO     | stage-out finished correctly
[2025-12-16 06:00:43] 2025-12-16 10:59:59,707 | INFO     | monitor loop #355: job 0:6930226131 is in state 'finished'
[2025-12-16 06:00:43] 2025-12-16 10:59:59,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:00:43] 2025-12-16 10:59:59,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 06:00:43] 2025-12-16 11:00:00,481 | INFO     | time since job start (4771s) is within the limit (174528.0s)
[2025-12-16 06:00:43] 2025-12-16 11:00:00,954 | INFO     | job 6930226131 has state=finished
[2025-12-16 06:00:43] 2025-12-16 11:00:00,955 | INFO     | preparing for final server update for job 6930226131 in state='finished'
[2025-12-16 06:00:43] 2025-12-16 11:00:00,961 | INFO     | this job has now completed (state=finished)
[2025-12-16 06:00:43] 2025-12-16 11:00:00,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 06:00:43] 2025-12-16 11:00:00,962 | INFO     | log transfer has been attempted: DONE
[2025-12-16 06:00:43] 2025-12-16 11:00:00,962 | INFO     | job 6930226131 has finished - writing final server update
[2025-12-16 06:00:43] 2025-12-16 11:00:00,962 | INFO     | total number of processed events: 400 (read)
[2025-12-16 06:00:43] 2025-12-16 11:00:00,963 | INFO     | executing command: lscpu
[2025-12-16 06:00:43] 2025-12-16 11:00:00,988 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 06:00:43] 2025-12-16 11:00:01,604 | INFO     | PID=19286 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 06:00:43] 2025-12-16 11:00:02,216 | INFO     | monitor loop #356: job 0:6930226131 is in state 'finished'
[2025-12-16 06:00:43] 2025-12-16 11:00:02,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:00:43] 2025-12-16 11:00:02,604 | INFO     | time since job start (4773s) is within the limit (174528.0s)
[2025-12-16 06:00:43] 2025-12-16 11:00:04,610 | INFO     | time since job start (4775s) is within the limit (174528.0s)
[2025-12-16 06:00:43] 2025-12-16 11:00:04,719 | INFO     | monitor loop #357: job 0:6930226131 is in state 'finished'
[2025-12-16 06:00:43] 2025-12-16 11:00:04,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:00:43] 2025-12-16 11:00:06,615 | INFO     | time since job start (4777s) is within the limit (174528.0s)
[2025-12-16 06:00:43] 2025-12-16 11:00:06,855 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 06:00:43] 2025-12-16 11:00:06,859 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5833333333333
[2025-12-16 06:00:43] 2025-12-16 11:00:06,862 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930226131/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 06:00:43] 2025-12-16 11:00:06,863 | INFO     | extracted standard info from prmon json
[2025-12-16 06:00:43] 2025-12-16 11:00:06,863 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 06:00:43] 2025-12-16 11:00:06,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 06:00:43] 2025-12-16 11:00:06,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 06:00:43] 2025-12-16 11:00:06,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 06:00:43] 2025-12-16 11:00:06,866 | INFO     | fitting pss+swap vs Time
[2025-12-16 06:00:43] 2025-12-16 11:00:06,866 | INFO     | sum of square deviations: 110960220.0
[2025-12-16 06:00:43] 2025-12-16 11:00:06,866 | INFO     | sum of deviations: -8665096848.000002
[2025-12-16 06:00:43] 2025-12-16 11:00:06,867 | INFO     | mean x: 1765880498.0
[2025-12-16 06:00:43] 2025-12-16 11:00:06,867 | INFO     | mean y: 2769758.38028169
[2025-12-16 06:00:43] 2025-12-16 11:00:06,867 | INFO     | intersect: 137903771911.80493
[2025-12-16 06:00:43] 2025-12-16 11:00:06,867 | INFO     | chi2: 0.08639187778027249
[2025-12-16 06:00:43] 2025-12-16 11:00:06,867 | INFO     | current memory leak: -78.09 B/s (using 71 data points, chi2=0.09)
[2025-12-16 06:00:43] 2025-12-16 11:00:06,867 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | ..............................
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . Timing measurements:
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . get job = 0 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . initial setup = 2 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . payload setup = 7 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . stage-in = 0 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . payload execution = 4742 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . stage-out = 0 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,868 | INFO     | . log creation = 0 s
[2025-12-16 06:00:43] 2025-12-16 11:00:06,869 | INFO     | ..............................
[2025-12-16 06:00:43] 2025-12-16 11:00:07,168 | INFO     | 
[2025-12-16 06:00:43] 2025-12-16 11:00:07,168 | INFO     | job summary report
[2025-12-16 06:00:43] 2025-12-16 11:00:07,169 | INFO     | --------------------------------------------------
[2025-12-16 06:00:43] 2025-12-16 11:00:07,169 | INFO     | PanDA job id: 6930226131
[2025-12-16 06:00:43] 2025-12-16 11:00:07,169 | INFO     | task id: 47886933
[2025-12-16 06:00:43] 2025-12-16 11:00:07,169 | INFO     | errors: (none)
[2025-12-16 06:00:43] 2025-12-16 11:00:07,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 06:00:43] 2025-12-16 11:00:07,169 | INFO     | pilot state: finished 
[2025-12-16 06:00:43] 2025-12-16 11:00:07,170 | INFO     | transexitcode: 0
[2025-12-16 06:00:43] 2025-12-16 11:00:07,170 | INFO     | exeerrorcode: 0
[2025-12-16 06:00:43] 2025-12-16 11:00:07,170 | INFO     | exeerrordiag: 
[2025-12-16 06:00:43] 2025-12-16 11:00:07,170 | INFO     | exitcode: 0
[2025-12-16 06:00:43] 2025-12-16 11:00:07,170 | INFO     | exitmsg: OK
[2025-12-16 06:00:43] 2025-12-16 11:00:07,170 | INFO     | cpuconsumptiontime: 50636 s
[2025-12-16 06:00:43] 2025-12-16 11:00:07,171 | INFO     | nevents: 400
[2025-12-16 06:00:43] 2025-12-16 11:00:07,171 | INFO     | neventsw: 0
[2025-12-16 06:00:43] 2025-12-16 11:00:07,171 | INFO     | pid: 25682
[2025-12-16 06:00:43] 2025-12-16 11:00:07,171 | INFO     | pgrp: 25682
[2025-12-16 06:00:43] 2025-12-16 11:00:07,171 | INFO     | corecount: 12
[2025-12-16 06:00:43] 2025-12-16 11:00:07,171 | INFO     | event service: False
[2025-12-16 06:00:43] 2025-12-16 11:00:07,172 | INFO     | sizes: {0: 2283965, 1: 2283965, 5: 2284255, 11: 2284311, 4753: 2310490, 4754: 2319672, 4761: 2319810}
[2025-12-16 06:00:43] 2025-12-16 11:00:07,172 | INFO     | --------------------------------------------------
[2025-12-16 06:00:43] 2025-12-16 11:00:07,172 | INFO     | 
[2025-12-16 06:00:43] 2025-12-16 11:00:07,172 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 06:00:43] 2025-12-16 11:00:07,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,198 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,200 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,200 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 06:00:43] 2025-12-16 11:00:07,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 06:00:43] 2025-12-16 11:00:07,201 | INFO     | job 6930226131 has completed (purged errors)
[2025-12-16 06:00:43] 2025-12-16 11:00:07,201 | INFO     | overall cleanup function is called
[2025-12-16 06:00:43] 2025-12-16 11:00:08,209 | INFO     | --- collectZombieJob: --- 10, [25682]
[2025-12-16 06:00:43] 2025-12-16 11:00:08,209 | INFO     | zombie collector waiting for pid 25682
[2025-12-16 06:00:43] 2025-12-16 11:00:08,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 06:00:43] 2025-12-16 11:00:08,210 | INFO     | collected zombie processes
[2025-12-16 06:00:43] 2025-12-16 11:00:08,210 | INFO     | will attempt to kill all subprocesses of pid=25682
[2025-12-16 06:00:43] 2025-12-16 11:00:08,304 | INFO     | process IDs to be killed: [25682] (in reverse order)
[2025-12-16 06:00:43] 2025-12-16 11:00:08,360 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 06:00:43] 2025-12-16 11:00:08,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 06:00:43] 2025-12-16 11:00:08,365 | INFO     | did not find any defunct processes belonging to 25682
[2025-12-16 06:00:43] 2025-12-16 11:00:08,367 | INFO     | did not find any defunct processes belonging to 25682
[2025-12-16 06:00:43] 2025-12-16 11:00:08,367 | INFO     | ready for new job
[2025-12-16 06:00:43] 2025-12-16 11:00:08,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 06:00:43] 2025-12-16 11:00:08,369 | INFO     | ***************************************
[2025-12-16 06:00:43] 2025-12-16 11:00:08,369 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 06:00:43] 2025-12-16 11:00:08,369 | INFO     | ***************************************
[2025-12-16 06:00:43] 2025-12-16 11:00:08,369 | INFO     | 
[2025-12-16 06:00:43] 2025-12-16 11:00:08,370 | INFO     | architecture information:
[2025-12-16 06:00:43] 2025-12-16 11:00:08,370 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:00:43] 2025-12-16 11:00:08,387 | INFO     | cat /etc/os-release:
[2025-12-16 06:00:43] NAME="CentOS Linux"
[2025-12-16 06:00:43] VERSION="7 (Core)"
[2025-12-16 06:00:43] ID="centos"
[2025-12-16 06:00:43] ID_LIKE="rhel fedora"
[2025-12-16 06:00:43] VERSION_ID="7"
[2025-12-16 06:00:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:00:43] ANSI_COLOR="0;31"
[2025-12-16 06:00:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:00:43] HOME_URL="https://www.centos.org/"
[2025-12-16 06:00:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:00:43] 
[2025-12-16 06:00:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:00:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:00:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:00:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:00:43] 
[2025-12-16 06:00:43] 2025-12-16 11:00:08,387 | INFO     | ***************************************
[2025-12-16 06:00:43] 2025-12-16 11:00:08,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 06:00:43] 2025-12-16 11:00:08,918 | INFO     | sufficient remaining disk space (29459742720 B)
[2025-12-16 06:00:43] 2025-12-16 11:00:08,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:00:43] 2025-12-16 11:00:08,919 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:00:43] 2025-12-16 11:00:08,919 | INFO     | update_server=False
[2025-12-16 06:00:43] 2025-12-16 11:00:08,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:00:43] 2025-12-16 11:00:08,919 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:00:43] 2025-12-16 11:00:08,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:00:43] 2025-12-16 11:00:08,920 | INFO     | aborting loop
[2025-12-16 06:00:43] 2025-12-16 11:00:09,727 | INFO     | all data control threads have been joined
[2025-12-16 06:00:43] 2025-12-16 11:00:09,841 | INFO     | all job control threads have been joined
[2025-12-16 06:00:43] 2025-12-16 11:00:09,925 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:09,925 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:09,926 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:10,060 | INFO     | all payload control threads have been joined
[2025-12-16 06:00:43] 2025-12-16 11:00:10,081 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:10,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:00:43] 2025-12-16 11:00:10,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:00:43] 2025-12-16 11:00:10,333 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:10,398 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:10,731 | INFO     | [data] control thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:10,842 | INFO     | [job] control thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:10,918 | INFO     | [job] validate thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:11,067 | INFO     | [payload] control thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:11,177 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:11,348 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:11,379 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:12,262 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:14,332 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:19,785 | INFO     | job.realtimelogging is not enabled
[2025-12-16 06:00:43] 2025-12-16 11:00:20,790 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:00:43] 2025-12-16 11:00:36,721 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:00:43] 2025-12-16 11:00:37,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644300658496)>', '<ExcThread(monitor, started 139643840341760)>']
[2025-12-16 06:00:43] 2025-12-16 11:00:39,822 | INFO     | PID=19286 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 06:00:43] 2025-12-16 11:00:39,824 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:00:43] 2025-12-16 11:00:39,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:00:43] 2025-12-16 11:00:39,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:00:43] 2025-12-16 11:00:39,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:00:43] 2025-12-16 11:00:39,824 | INFO     | [monitor] control thread has ended
[2025-12-16 06:00:43] 2025-12-16 11:00:42,712 | INFO     | all workflow threads have been joined
[2025-12-16 06:00:43] 2025-12-16 11:00:42,712 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:00:43] 2025-12-16 11:00:42,713 | INFO     | traces error code: 0
[2025-12-16 06:00:43] 2025-12-16 11:00:42,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:00:43] 2025-12-16 11:00:42,808 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:00:43] 2025-12-16 11:00:42,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:00:43] 2025-12-16 11:00:42,816 [wrapper] pilotpid: 19286
[2025-12-16 06:00:43] 2025-12-16 11:00:42,820 [wrapper] Pilot exit status: 0
[2025-12-16 06:00:43] 2025-12-16 11:00:42,836 [wrapper] pandaids: 6930226131
[2025-12-16 06:00:43] 2025-12-16 11:00:42,876 [wrapper] cleanup supervisor_pilot 21763 19287
[2025-12-16 06:00:43] 2025-12-16 11:00:42,879 [wrapper] Test setup, not cleaning
[2025-12-16 06:00:43] 2025-12-16 11:00:42,883 [wrapper] apfmon messages muted
[2025-12-16 06:00:43] 2025-12-16 11:00:42,887 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:00:43] 2025-12-16 11:00:42,891 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:00:43]  *** Error codes and diagnostics ***
[2025-12-16 06:00:43]     "exeErrorCode": 0,
[2025-12-16 06:00:43]     "exeErrorDiag": "",
[2025-12-16 06:00:43]     "pilotErrorCode": 0,
[2025-12-16 06:00:43]     "pilotErrorDiag": "",
[2025-12-16 06:00:43]  *** Listing of results directory ***
[2025-12-16 06:00:43] total 334844
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 18:23 pilot3.tar.gz
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 18:23 queuedata.json
[2025-12-16 06:00:43] -rwx------ 1 boincer umatlas     36322 Dec 15 18:25 runpilot2-wrapper.sh
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas       100 Dec 16 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:00:43] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 04:40 run_atlas
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas       105 Dec 16 04:40 job.xml
[2025-12-16 06:00:43] -rw-r--r-- 2 boincer umatlas 190246158 Dec 16 04:40 EVNT.47886929._000312.pool.root.1
[2025-12-16 06:00:43] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 04:40 start_atlas.sh
[2025-12-16 06:00:43] drwxrwx--x 2 boincer umatlas      4096 Dec 16 04:40 shared
[2025-12-16 06:00:43] -rw-r--r-- 2 boincer umatlas    592394 Dec 16 04:40 input.tar.gz
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas         0 Dec 16 04:40 boinc_lockfile
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas      2513 Dec 16 04:40 pandaJob.out
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas        57 Dec 16 04:40 setup.sh.local
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas    994525 Dec 16 04:40 agis_schedconf.cvmfs.json
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas   1516240 Dec 16 04:40 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:00:43] drwx------ 5 boincer umatlas      4096 Dec 16 04:40 pilot3
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 05:55 init_data.xml
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas 146559934 Dec 16 05:59 HITS.47886933._005990.pool.root.1
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas      1058 Dec 16 05:59 memory_monitor_summary.json
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas       530 Dec 16 05:59 boinc_task_state.xml
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas    386638 Dec 16 05:59 log.47886933._005990.job.log.tgz.1
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas      7846 Dec 16 06:00 heartbeat.json
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 06:00 boinc_mmap_file
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas        27 Dec 16 06:00 wrapper_checkpoint.txt
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas        95 Dec 16 06:00 pilot_heartbeat.json
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas      4818 Dec 16 06:00 pilotlog.txt
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas    690723 Dec 16 06:00 log.47886933._005990.job.log.1
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas       357 Dec 16 06:00 output.list
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas       620 Dec 16 06:00 runtime_log
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas   1095680 Dec 16 06:00 result.tar.gz
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 06:00 runtime_log.err
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas       659 Dec 16 06:00 DDLODmW7Wp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBTUKDmOfjkBn.diag
[2025-12-16 06:00:43] -rw-r--r-- 1 boincer umatlas     22008 Dec 16 06:00 stderr.txt
[2025-12-16 06:00:43] HITS file was successfully produced:
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas 146559934 Dec 16 05:59 shared/HITS.pool.root.1
[2025-12-16 06:00:43]  *** Contents of shared directory: ***
[2025-12-16 06:00:43] total 330588
[2025-12-16 06:00:43] -rw-r--r-- 2 boincer umatlas 190246158 Dec 16 04:40 ATLAS.root_0
[2025-12-16 06:00:43] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 04:40 start_atlas.sh
[2025-12-16 06:00:43] -rw-r--r-- 2 boincer umatlas    592394 Dec 16 04:40 input.tar.gz
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas 146559934 Dec 16 05:59 HITS.pool.root.1
[2025-12-16 06:00:43] -rw------- 1 boincer umatlas   1095680 Dec 16 06:00 result.tar.gz
06:00:44 (15602): run_atlas exited; CPU time 50618.225980
06:00:44 (15602): called boinc_finish(0)

</stderr_txt>
]]>

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