Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:46 (162096): wrapper (7.7.26015): starting
13:54:46 (162096): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 13:54:46] Arguments: --nthreads 8
[2025-12-16 13:54:46] Threads: 8
[2025-12-16 13:54:46] Checking for CVMFS
[2025-12-16 13:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 13:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 13:54:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 13:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 13:54:46] 2.13.2.0 6987 438 59288 154071 2 57 2221463 4097024 0 130560 0 421345 99.993 15093 25624 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-16 13:54:46] CVMFS is ok
[2025-12-16 13:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 13:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 13:54:46] Further information can be found at the LHC@home message board.
[2025-12-16 13:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 13:54:46] Checking for apptainer binary...
[2025-12-16 13:54:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-16 13:54:46] apptainer is not installed, using version from CVMFS
[2025-12-16 13:54:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 13:54:46] pckeatlas02
[2025-12-16 13:54:46] apptainer works
[2025-12-16 13:54:46] Set ATHENA_PROC_NUMBER=8
[2025-12-16 13:54:46] Set ATHENA_CORE_NUMBER=8
[2025-12-16 13:54:46] Starting ATLAS job with PandaID=6930759135
[2025-12-16 13:54:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 15:20:04]  *** The last 200 lines of the pilot log: ***
[2025-12-16 15:20:04]  is_altstaged=None
[2025-12-16 15:20:04]  is_tar=False
[2025-12-16 15:20:04]  lfn=log.47886831._011840.job.log.tgz.1
[2025-12-16 15:20:04]  mtime=0
[2025-12-16 15:20:04]  protocol_id=None
[2025-12-16 15:20:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 15:20:04]  replicas=None
[2025-12-16 15:20:04]  scope=mc23_13p6TeV
[2025-12-16 15:20:04]  status=None
[2025-12-16 15:20:04]  status_code=0
[2025-12-16 15:20:04]  storage_token=
[2025-12-16 15:20:04]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6930759135/log.47886831._011840.job.log.tgz.1
[2025-12-16 15:20:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/b8/log.47886831._011840.job.log.tgz.1
[2025-12-16 15:20:04]  workdir=None
[2025-12-16 15:20:04] ]
[2025-12-16 15:20:04] 2025-12-16 14:19:13,653 | INFO     | transferring file log.47886831._011840.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6930759135/log.47886831._011840.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-16 15:20:04] 2025-12-16 14:19:13,654 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6930759135/log.47886831._011840.job.log.tgz.1 /var/lib/boinc/slots/19/log.47886831._011840.j
[2025-12-16 15:20:04] 2025-12-16 14:19:13,662 | INFO     | adding to output.list: log.47886831._011840.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/b8/log.47886831._011840.job.log.tg
[2025-12-16 15:20:04] 2025-12-16 14:19:13,662 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 15:20:04] 2025-12-16 14:19:13,662 | INFO     | summary of transferred files:
[2025-12-16 15:20:04] 2025-12-16 14:19:13,662 | INFO     |  -- lfn=log.47886831._011840.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 15:20:04] 2025-12-16 14:19:13,663 | INFO     | stage-out finished correctly
[2025-12-16 15:20:04] 2025-12-16 14:19:13,698 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 15:20:04] 2025-12-16 14:19:15,236 | INFO     | time since job start (5065s) is within the limit (174528.0s)
[2025-12-16 15:20:04] 2025-12-16 14:19:15,245 | INFO     | job 6930759135 has state=finished
[2025-12-16 15:20:04] 2025-12-16 14:19:15,245 | INFO     | preparing for final server update for job 6930759135 in state='finished'
[2025-12-16 15:20:04] 2025-12-16 14:19:15,246 | INFO     | this job has now completed (state=finished)
[2025-12-16 15:20:04] 2025-12-16 14:19:15,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 15:20:04] 2025-12-16 14:19:15,246 | INFO     | log transfer has been attempted: DONE
[2025-12-16 15:20:04] 2025-12-16 14:19:15,246 | INFO     | job 6930759135 has finished - writing final server update
[2025-12-16 15:20:04] 2025-12-16 14:19:15,246 | INFO     | total number of processed events: 400 (read)
[2025-12-16 15:20:04] 2025-12-16 14:19:15,247 | INFO     | executing command: lscpu
[2025-12-16 15:20:04] 2025-12-16 14:19:15,255 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 15:20:04] 2025-12-16 14:19:17,241 | INFO     | time since job start (5067s) is within the limit (174528.0s)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,523 | WARNING  | process 173776 can no longer be monitored (due to stat problems) - aborting
[2025-12-16 15:20:04] 2025-12-16 14:19:17,524 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6930759135/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,559 | INFO     | number of running child processes to parent process 173776: 1
[2025-12-16 15:20:04] 2025-12-16 14:19:17,560 | INFO     | maximum number of monitored processes: 6
[2025-12-16 15:20:04] 2025-12-16 14:19:17,936 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 15:20:04] 2025-12-16 14:19:17,936 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3854.679375
[2025-12-16 15:20:04] 2025-12-16 14:19:17,937 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6930759135/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,937 | INFO     | extracted standard info from prmon json
[2025-12-16 15:20:04] 2025-12-16 14:19:17,937 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 15:20:04] 2025-12-16 14:19:17,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 15:20:04] 2025-12-16 14:19:17,938 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 15:20:04] 2025-12-16 14:19:17,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 15:20:04] 2025-12-16 14:19:17,938 | INFO     | fitting pss+swap vs Time
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | sum of square deviations: 136095575.0
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | sum of deviations: -9724406988.0
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | mean x: 1765892300.5
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | mean y: 2638383.210526316
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | intersect: 126180549950.41316
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | chi2: 0.13481738769900722
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | current memory leak: -71.45 B/s (using 76 data points, chi2=0.13)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | could have reported an average CPU frequency of 3752 MHz (6 samples)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | ..............................
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | . Timing measurements:
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | . get job = 0 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | . initial setup = 0 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | . payload setup = 3 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,939 | INFO     | . stage-in = 0 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,940 | INFO     | . payload execution = 5043 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,940 | INFO     | . stage-out = 0 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,940 | INFO     | . log creation = 0 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,940 | INFO     | ..............................
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | 
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | job summary report
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | --------------------------------------------------
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | PanDA job id: 6930759135
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | task id: 47886831
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | errors: (none)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | pilot state: finished 
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | transexitcode: 0
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | exeerrorcode: 0
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | exeerrordiag: 
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | exitcode: 0
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | exitmsg: OK
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | cpuconsumptiontime: 37959 s
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | nevents: 400
[2025-12-16 15:20:04] 2025-12-16 14:19:17,976 | INFO     | neventsw: 0
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | pid: 173776
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | pgrp: 173776
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | corecount: 8
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | event service: False
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | sizes: {0: 2283994, 2: 2284256, 11: 2284284, 5049: 2310673, 5050: 2319729, 5054: 2319867}
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | --------------------------------------------------
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | 
[2025-12-16 15:20:04] 2025-12-16 14:19:17,977 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | job 6930759135 has completed (purged errors)
[2025-12-16 15:20:04] 2025-12-16 14:19:17,986 | INFO     | overall cleanup function is called
[2025-12-16 15:20:04] 2025-12-16 14:19:18,285 | INFO     | PID=165871 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 15:20:04] 2025-12-16 14:19:18,992 | INFO     | --- collectZombieJob: --- 10, [173776]
[2025-12-16 15:20:04] 2025-12-16 14:19:18,992 | INFO     | zombie collector waiting for pid 173776
[2025-12-16 15:20:04] 2025-12-16 14:19:18,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 15:20:04] 2025-12-16 14:19:18,992 | INFO     | collected zombie processes
[2025-12-16 15:20:04] 2025-12-16 14:19:18,992 | INFO     | will attempt to kill all subprocesses of pid=173776
[2025-12-16 15:20:04] 2025-12-16 14:19:19,022 | INFO     | process IDs to be killed: [173776] (in reverse order)
[2025-12-16 15:20:04] 2025-12-16 14:19:19,038 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 15:20:04] 2025-12-16 14:19:19,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 15:20:04] 2025-12-16 14:19:19,039 | INFO     | did not find any defunct processes belonging to 173776
[2025-12-16 15:20:04] 2025-12-16 14:19:19,040 | INFO     | did not find any defunct processes belonging to 173776
[2025-12-16 15:20:04] 2025-12-16 14:19:19,040 | INFO     | ready for new job
[2025-12-16 15:20:04] 2025-12-16 14:19:19,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 15:20:04] 2025-12-16 14:19:19,041 | INFO     | ***************************************
[2025-12-16 15:20:04] 2025-12-16 14:19:19,041 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 15:20:04] 2025-12-16 14:19:19,041 | INFO     | ***************************************
[2025-12-16 15:20:04] 2025-12-16 14:19:19,041 | INFO     | 
[2025-12-16 15:20:04] 2025-12-16 14:19:19,041 | INFO     | architecture information:
[2025-12-16 15:20:04] 2025-12-16 14:19:19,041 | INFO     | executing command: cat /etc/os-release
[2025-12-16 15:20:04] 2025-12-16 14:19:19,046 | INFO     | cat /etc/os-release:
[2025-12-16 15:20:04] NAME="CentOS Linux"
[2025-12-16 15:20:04] VERSION="7 (Core)"
[2025-12-16 15:20:04] ID="centos"
[2025-12-16 15:20:04] ID_LIKE="rhel fedora"
[2025-12-16 15:20:04] VERSION_ID="7"
[2025-12-16 15:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 15:20:04] ANSI_COLOR="0;31"
[2025-12-16 15:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 15:20:04] HOME_URL="https://www.centos.org/"
[2025-12-16 15:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 15:20:04] 
[2025-12-16 15:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 15:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 15:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 15:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 15:20:04] 
[2025-12-16 15:20:04] 2025-12-16 14:19:19,046 | INFO     | ***************************************
[2025-12-16 15:20:04] 2025-12-16 14:19:19,549 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-12-16 15:20:04] 2025-12-16 14:19:19,556 | INFO     | sufficient remaining disk space (116274495488 B)
[2025-12-16 15:20:04] 2025-12-16 14:19:19,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 15:20:04] 2025-12-16 14:19:19,556 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 15:20:04] 2025-12-16 14:19:19,556 | INFO     | update_server=False
[2025-12-16 15:20:04] 2025-12-16 14:19:19,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 15:20:04] 2025-12-16 14:19:19,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 15:20:04] 2025-12-16 14:19:19,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 15:20:04] 2025-12-16 14:19:19,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 15:20:04] 2025-12-16 14:19:19,557 | INFO     | aborting loop
[2025-12-16 15:20:04] 2025-12-16 14:19:19,726 | INFO     | all payload control threads have been joined
[2025-12-16 15:20:04] 2025-12-16 14:19:19,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 15:20:04] 2025-12-16 14:19:20,277 | INFO     | all data control threads have been joined
[2025-12-16 15:20:04] 2025-12-16 14:19:20,562 | INFO     | [job] retrieve thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:20,562 | INFO     | [job] queue monitor thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:20,562 | INFO     | [job] job monitor thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:20,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:20,731 | INFO     | [payload] control thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,151 | INFO     | [job] validate thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,210 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,224 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,244 | INFO     | all job control threads have been joined
[2025-12-16 15:20:04] 2025-12-16 14:19:21,283 | INFO     | [data] control thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,301 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,511 | INFO     | [payload] failed_post thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,562 | INFO     | [data] copytool_out thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:21,719 | INFO     | [data] copytool_in thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:22,023 | INFO     | [payload] validate_post thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:22,250 | INFO     | [job] control thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:23,743 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 15:20:04] 2025-12-16 14:19:50,410 | INFO     | PID=165871 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 15:20:04] 2025-12-16 14:19:50,410 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 15:20:04] 2025-12-16 14:19:50,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 15:20:04] 2025-12-16 14:19:50,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 15:20:04] 2025-12-16 14:19:58,278 | INFO     | [monitor] cgroup control has ended
[2025-12-16 15:20:04] 2025-12-16 14:19:59,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526419740480)>', '<ExcThread(monitor, started 140525709530880)>']
[2025-12-16 15:20:04] 2025-12-16 14:20:00,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 15:20:04] 2025-12-16 14:20:00,458 | INFO     | [monitor] control thread has ended
[2025-12-16 15:20:04] 2025-12-16 14:20:04,543 | INFO     | all workflow threads have been joined
[2025-12-16 15:20:04] 2025-12-16 14:20:04,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 15:20:04] 2025-12-16 14:20:04,543 | INFO     | traces error code: 0
[2025-12-16 15:20:04] 2025-12-16 14:20:04,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 15:20:04] 2025-12-16 14:20:04,599 [wrapper] ==== pilot stdout END ====
[2025-12-16 15:20:04] 2025-12-16 14:20:04,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 15:20:04] 2025-12-16 14:20:04,601 [wrapper] pilotpid: 165871
[2025-12-16 15:20:04] 2025-12-16 14:20:04,602 [wrapper] Pilot exit status: 0
[2025-12-16 15:20:04] 2025-12-16 14:20:04,606 [wrapper] pandaids: 6930759135
[2025-12-16 15:20:04] 2025-12-16 14:20:04,617 [wrapper] cleanup supervisor_pilot  189776 165872
[2025-12-16 15:20:04] 2025-12-16 14:20:04,618 [wrapper] Test setup, not cleaning
[2025-12-16 15:20:04] 2025-12-16 14:20:04,619 [wrapper] apfmon messages muted
[2025-12-16 15:20:04] 2025-12-16 14:20:04,620 [wrapper] ==== wrapper stdout END ====
[2025-12-16 15:20:04] 2025-12-16 14:20:04,621 [wrapper] ==== wrapper stderr END ====
[2025-12-16 15:20:04]  *** Error codes and diagnostics ***
[2025-12-16 15:20:04]     "exeErrorCode": 0,
[2025-12-16 15:20:04]     "exeErrorDiag": "",
[2025-12-16 15:20:04]     "pilotErrorCode": 0,
[2025-12-16 15:20:04]     "pilotErrorDiag": "",
[2025-12-16 15:20:04]  *** Listing of results directory ***
[2025-12-16 15:20:04] total 339336
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc    579449 Dec 16 05:16 pilot3.tar.gz
[2025-12-16 15:20:04] -rwx------. 1 boinc boinc     36322 Dec 16 05:20 runpilot2-wrapper.sh
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc      5112 Dec 16 05:22 queuedata.json
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc       100 Dec 16 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 15:20:04] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 13:54 run_atlas
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc       105 Dec 16 13:54 job.xml
[2025-12-16 15:20:04] -rw-r--r--. 2 boinc boinc     15847 Dec 16 13:54 start_atlas.sh
[2025-12-16 15:20:04] drwxrwx--x. 2 boinc boinc        68 Dec 16 13:54 shared
[2025-12-16 15:20:04] -rw-r--r--. 2 boinc boinc    592414 Dec 16 13:54 input.tar.gz
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc      6275 Dec 16 13:54 init_data.xml
[2025-12-16 15:20:04] -rw-r--r--. 2 boinc boinc 191547911 Dec 16 13:54 EVNT.47886829._000476.pool.root.1
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc         0 Dec 16 13:54 boinc_lockfile
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc      2539 Dec 16 13:54 pandaJob.out
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc    990993 Dec 16 13:54 agis_schedconf.cvmfs.json
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc   1516240 Dec 16 13:54 agis_ddmendpoints.agis.ALL.json
[2025-12-16 15:20:04] drwx------. 5 boinc boinc      4096 Dec 16 13:54 pilot3
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc 149876336 Dec 16 15:18 HITS.47886831._011840.pool.root.1
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc      1014 Dec 16 15:19 memory_monitor_summary.json
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc    340949 Dec 16 15:19 log.47886831._011840.job.log.tgz.1
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc       529 Dec 16 15:19 boinc_task_state.xml
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc      7771 Dec 16 15:19 heartbeat.json
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc        27 Dec 16 15:19 wrapper_checkpoint.txt
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc      8192 Dec 16 15:19 boinc_mmap_file
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc        95 Dec 16 15:19 pilot_heartbeat.json
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc      4749 Dec 16 15:20 pilotlog.txt
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc    739418 Dec 16 15:20 log.47886831._011840.job.log.1
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc       357 Dec 16 15:20 output.list
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc       620 Dec 16 15:20 runtime_log
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc   1095680 Dec 16 15:20 result.tar.gz
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc      8846 Dec 16 15:20 runtime_log.err
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc       650 Dec 16 15:20 bbxLDmjibp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk0UKDmHdBzbn.diag
[2025-12-16 15:20:04] -rw-r--r--. 1 boinc boinc     21708 Dec 16 15:20 stderr.txt
[2025-12-16 15:20:04] HITS file was successfully produced:
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc 149876336 Dec 16 15:18 shared/HITS.pool.root.1
[2025-12-16 15:20:04]  *** Contents of shared directory: ***
[2025-12-16 15:20:04] total 335092
[2025-12-16 15:20:04] -rw-r--r--. 2 boinc boinc     15847 Dec 16 13:54 start_atlas.sh
[2025-12-16 15:20:04] -rw-r--r--. 2 boinc boinc    592414 Dec 16 13:54 input.tar.gz
[2025-12-16 15:20:04] -rw-r--r--. 2 boinc boinc 191547911 Dec 16 13:54 ATLAS.root_0
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc 149876336 Dec 16 15:18 HITS.pool.root.1
[2025-12-16 15:20:04] -rw-------. 1 boinc boinc   1095680 Dec 16 15:20 result.tar.gz
15:20:06 (162096): run_atlas exited; CPU time 38000.790439
15:20:06 (162096): called boinc_finish(0)

</stderr_txt>
]]>

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