Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:17:33 (31188): wrapper (7.7.26015): starting
10:17:33 (31188): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 10:17:33] Arguments: --nthreads 8
[2025-12-16 10:17:33] Threads: 8
[2025-12-16 10:17:33] Checking for CVMFS
[2025-12-16 10:17:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 10:17:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 10:17:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 10:17:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 10:17:35] 2.11.2.0 1190 9 53956 154065 2 162 21925071 25165825 4660 130560 0 353630 99.993 37555 19063 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-16 10:17:35] CVMFS is ok
[2025-12-16 10:17:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 10:17:35] Checking for apptainer binary...
[2025-12-16 10:17:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 10:17:35] Running /usr/bin/apptainer --version
[2025-12-16 10:17:35] apptainer version 1.3.2-1.el7
[2025-12-16 10:17:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 10:17:49] cg-vwn395.simple-grid.lan
[2025-12-16 10:17:49] apptainer works
[2025-12-16 10:17:49] Set ATHENA_PROC_NUMBER=8
[2025-12-16 10:17:49] Set ATHENA_CORE_NUMBER=8
[2025-12-16 10:17:49] Starting ATLAS job with PandaID=6930661942
[2025-12-16 10:17:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 14:58:54]  *** The last 200 lines of the pilot log: ***
[2025-12-16 14:58:54] 2025-12-16 13:57:45,525 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 14:58:54] 2025-12-16 13:57:45,526 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-16 14:58:54] 2025-12-16 13:57:45,528 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6930661942/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,529 | INFO     | extracted standard info from prmon json
[2025-12-16 14:58:54] 2025-12-16 13:57:45,529 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 14:58:54] 2025-12-16 13:57:45,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 14:58:54] 2025-12-16 13:57:45,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 14:58:54] 2025-12-16 13:57:45,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 14:58:54] 2025-12-16 13:57:45,535 | INFO     | fitting pss+swap vs Time
[2025-12-16 14:58:54] 2025-12-16 13:57:45,536 | INFO     | sum of square deviations: 5640782972.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,539 | INFO     | sum of deviations: 18850557086.00001
[2025-12-16 14:58:54] 2025-12-16 13:57:45,539 | INFO     | mean x: 1765885361.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,539 | INFO     | mean y: 2451133.6235741447
[2025-12-16 14:58:54] 2025-12-16 13:57:45,539 | INFO     | intersect: -5898843592.675681
[2025-12-16 14:58:54] 2025-12-16 13:57:45,540 | INFO     | chi2: 6.318416678226233
[2025-12-16 14:58:54] 2025-12-16 13:57:45,540 | INFO     | sum of square deviations: 5325139844.5
[2025-12-16 14:58:54] 2025-12-16 13:57:45,543 | INFO     | sum of deviations: 54031552516.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,543 | INFO     | mean x: 1765885208.5
[2025-12-16 14:58:54] 2025-12-16 13:57:45,543 | INFO     | mean y: 2467934.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,543 | INFO     | intersect: -17915093325.699486
[2025-12-16 14:58:54] 2025-12-16 13:57:45,544 | INFO     | chi2: 4.730317677809659
[2025-12-16 14:58:54] 2025-12-16 13:57:45,544 | INFO     | current chi2=4.730317677809659 (change=25.13444556275134 %)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,544 | INFO     | sum of square deviations: 5021496942.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,547 | INFO     | sum of deviations: 53027229361.99996
[2025-12-16 14:58:54] 2025-12-16 13:57:45,547 | INFO     | mean x: 1765885056.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,547 | INFO     | mean y: 2467429.533596838
[2025-12-16 14:58:54] 2025-12-16 13:57:45,547 | INFO     | intersect: -18645356709.96384
[2025-12-16 14:58:54] 2025-12-16 13:57:45,548 | INFO     | chi2: 4.735418035300908
[2025-12-16 14:58:54] 2025-12-16 13:57:45,548 | INFO     | current chi2=4.735418035300908 (change=-0.10782272647722876 %)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,548 | INFO     | right removable region: 252
[2025-12-16 14:58:54] 2025-12-16 13:57:45,548 | INFO     | sum of square deviations: 5325139844.5
[2025-12-16 14:58:54] 2025-12-16 13:57:45,551 | INFO     | sum of deviations: -65446744938.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,551 | INFO     | mean x: 1765885513.5
[2025-12-16 14:58:54] 2025-12-16 13:57:45,551 | INFO     | mean y: 2491806.3410852714
[2025-12-16 14:58:54] 2025-12-16 13:57:45,551 | INFO     | intersect: 21705482181.53472
[2025-12-16 14:58:54] 2025-12-16 13:57:45,552 | INFO     | chi2: 2.333829868094913
[2025-12-16 14:58:54] 2025-12-16 13:57:45,552 | INFO     | current chi2=2.333829868094913 (change=63.063058564379325 %)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,552 | INFO     | sum of square deviations: 5021496942.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,555 | INFO     | sum of deviations: -85678900784.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,555 | INFO     | mean x: 1765885666.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,555 | INFO     | mean y: 2501875.968379447
[2025-12-16 14:58:54] 2025-12-16 13:57:45,555 | INFO     | intersect: 30132788625.2502
[2025-12-16 14:58:54] 2025-12-16 13:57:45,555 | INFO     | chi2: 1.8946065325136998
[2025-12-16 14:58:54] 2025-12-16 13:57:45,555 | INFO     | current chi2=1.8946065325136998 (change=18.81985236309225 %)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,556 | INFO     | left removable region: 20
[2025-12-16 14:58:54] 2025-12-16 13:57:45,556 | INFO     | sum of square deviations: 3871990738.0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,558 | INFO     | sum of deviations: -34977777498.50001
[2025-12-16 14:58:54] 2025-12-16 13:57:45,558 | INFO     | mean x: 1765885635.5
[2025-12-16 14:58:54] 2025-12-16 13:57:45,558 | INFO     | mean y: 2513032.952586207
[2025-12-16 14:58:54] 2025-12-16 13:57:45,558 | INFO     | intersect: 15954708951.226059
[2025-12-16 14:58:54] 2025-12-16 13:57:45,559 | INFO     | chi2: 0.166764573224382
[2025-12-16 14:58:54] 2025-12-16 13:57:45,559 | INFO     | current memory leak: -9.03 B/s (using 232 data points, chi2=0.17)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,560 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,560 | INFO     | ..............................
[2025-12-16 14:58:54] 2025-12-16 13:57:45,560 | INFO     | . Timing measurements:
[2025-12-16 14:58:54] 2025-12-16 13:57:45,560 | INFO     | . get job = 0 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,563 | INFO     | . initial setup = 6 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,563 | INFO     | . payload setup = 142 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,563 | INFO     | . stage-in = 0 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,564 | INFO     | . payload execution = 16148 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,564 | INFO     | . stage-out = 7 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,564 | INFO     | . log creation = 1 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,564 | INFO     | ..............................
[2025-12-16 14:58:54] 2025-12-16 13:57:45,866 | INFO     | time since job start (16591s) is within the limit (174528.0s)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,904 | INFO     | 
[2025-12-16 14:58:54] 2025-12-16 13:57:45,904 | INFO     | job summary report
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | --------------------------------------------------
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | PanDA job id: 6930661942
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | task id: 47886831
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | errors: (none)
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | pilot state: finished 
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | transexitcode: 0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | exeerrorcode: 0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | exeerrordiag: 
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | exitcode: 0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | exitmsg: OK
[2025-12-16 14:58:54] 2025-12-16 13:57:45,905 | INFO     | cpuconsumptiontime: 61804 s
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | nevents: 400
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | neventsw: 0
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | pid: 9220
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | pgrp: 9220
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | corecount: 8
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | event service: False
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | sizes: {0: 2283767, 1: 2284022, 12: 2284022, 23: 2284050, 33: 2284078, 44: 2284134, 55: 2284290, 66: 2284318, 76: 2284346, 87: 2284402, 93: 2284692, 98: 2285000, 1
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | --------------------------------------------------
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | 
[2025-12-16 14:58:54] 2025-12-16 13:57:45,906 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 14:58:54] 2025-12-16 13:57:46,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 14:58:54] 2025-12-16 13:57:46,383 | INFO     | job 6930661942 has completed (purged errors)
[2025-12-16 14:58:54] 2025-12-16 13:57:46,383 | INFO     | overall cleanup function is called
[2025-12-16 14:58:54] 2025-12-16 13:57:47,390 | INFO     | --- collectZombieJob: --- 10, [9220]
[2025-12-16 14:58:54] 2025-12-16 13:57:47,390 | INFO     | zombie collector waiting for pid 9220
[2025-12-16 14:58:54] 2025-12-16 13:57:47,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 14:58:54] 2025-12-16 13:57:47,391 | INFO     | collected zombie processes
[2025-12-16 14:58:54] 2025-12-16 13:57:47,391 | INFO     | will attempt to kill all subprocesses of pid=9220
[2025-12-16 14:58:54] 2025-12-16 13:57:47,506 | INFO     | process IDs to be killed: [9220] (in reverse order)
[2025-12-16 14:58:54] 2025-12-16 13:57:47,967 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 14:58:54] 2025-12-16 13:57:47,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 14:58:54] 2025-12-16 13:57:47,971 | INFO     | did not find any defunct processes belonging to 9220
[2025-12-16 14:58:54] 2025-12-16 13:57:47,976 | INFO     | did not find any defunct processes belonging to 9220
[2025-12-16 14:58:54] 2025-12-16 13:57:47,976 | INFO     | ready for new job
[2025-12-16 14:58:54] 2025-12-16 13:57:47,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 14:58:54] 2025-12-16 13:57:47,979 | INFO     | ***************************************
[2025-12-16 14:58:54] 2025-12-16 13:57:47,979 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 14:58:54] 2025-12-16 13:57:47,979 | INFO     | ***************************************
[2025-12-16 14:58:54] 2025-12-16 13:57:47,979 | INFO     | 
[2025-12-16 14:58:54] 2025-12-16 13:57:47,980 | INFO     | pilot is running in a VM
[2025-12-16 14:58:54] 2025-12-16 13:57:47,980 | INFO     | architecture information:
[2025-12-16 14:58:54] 2025-12-16 13:57:47,991 | INFO     | executing command: cat /etc/os-release
[2025-12-16 14:58:54] 2025-12-16 13:57:48,296 | INFO     | cat /etc/os-release:
[2025-12-16 14:58:54] NAME="CentOS Linux"
[2025-12-16 14:58:54] VERSION="7 (Core)"
[2025-12-16 14:58:54] ID="centos"
[2025-12-16 14:58:54] ID_LIKE="rhel fedora"
[2025-12-16 14:58:54] VERSION_ID="7"
[2025-12-16 14:58:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 14:58:54] ANSI_COLOR="0;31"
[2025-12-16 14:58:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 14:58:54] HOME_URL="https://www.centos.org/"
[2025-12-16 14:58:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 14:58:54] 
[2025-12-16 14:58:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 14:58:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 14:58:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 14:58:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 14:58:54] 
[2025-12-16 14:58:54] 2025-12-16 13:57:48,296 | INFO     | ***************************************
[2025-12-16 14:58:54] 2025-12-16 13:57:48,799 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-16 14:58:54] 2025-12-16 13:57:48,969 | INFO     | sufficient remaining disk space (496062431232 B)
[2025-12-16 14:58:54] 2025-12-16 13:57:48,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 14:58:54] 2025-12-16 13:57:48,970 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 14:58:54] 2025-12-16 13:57:48,970 | INFO     | update_server=False
[2025-12-16 14:58:54] 2025-12-16 13:57:48,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 14:58:54] 2025-12-16 13:57:49,041 | INFO     | all data control threads have been joined
[2025-12-16 14:58:54] 2025-12-16 13:57:49,115 | INFO     | all payload control threads have been joined
[2025-12-16 14:58:54] 2025-12-16 13:57:49,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 14:58:54] 2025-12-16 13:57:49,181 | INFO     | aborting loop
[2025-12-16 14:58:54] 2025-12-16 13:57:49,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 14:58:54] 2025-12-16 13:57:49,975 | INFO     | [job] retrieve thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,018 | INFO     | [payload] validate_post thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,047 | INFO     | [data] control thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,069 | INFO     | [data] copytool_in thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,121 | INFO     | [payload] control thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,133 | INFO     | all job control threads have been joined
[2025-12-16 14:58:54] 2025-12-16 13:57:50,186 | INFO     | [job] job monitor thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,283 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,722 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:50,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 14:58:54] 2025-12-16 13:57:51,031 | INFO     | [payload] failed_post thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:51,139 | INFO     | [job] control thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:51,249 | INFO     | [job] validate thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:51,265 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:51,733 | INFO     | [job] queue monitor thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:51,788 | INFO     | [data] copytool_out thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:57:52,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 14:58:54] 2025-12-16 13:57:56,354 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 14:58:54] 2025-12-16 13:58:19,067 | INFO     | PID=2679 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 14:58:54] 2025-12-16 13:58:19,067 | INFO     | .. there are 9 such processes running
[2025-12-16 14:58:54] 2025-12-16 13:58:19,067 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 14:58:54] 2025-12-16 13:58:19,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 14:58:54] 2025-12-16 13:58:19,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 14:58:54] 2025-12-16 13:58:42,211 | INFO     | [monitor] cgroup control has ended
[2025-12-16 14:58:54] 2025-12-16 13:58:44,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754621445952)>', '<ExcThread(monitor, started 139754049881856)>']
[2025-12-16 14:58:54] 2025-12-16 13:58:45,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 14:58:54] 2025-12-16 13:58:45,222 | INFO     | [monitor] control thread has ended
[2025-12-16 14:58:54] 2025-12-16 13:58:49,315 | INFO     | all workflow threads have been joined
[2025-12-16 14:58:54] 2025-12-16 13:58:49,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 14:58:54] 2025-12-16 13:58:49,316 | INFO     | traces error code: 0
[2025-12-16 14:58:54] 2025-12-16 13:58:49,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 14:58:54] 2025-12-16 13:58:49,802 [wrapper] ==== pilot stdout END ====
[2025-12-16 14:58:54] 2025-12-16 13:58:49,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 14:58:54] 2025-12-16 13:58:50,020 [wrapper] pilotpid: 2679
[2025-12-16 14:58:54] 2025-12-16 13:58:50,100 [wrapper] Pilot exit status: 0
[2025-12-16 14:58:54] 2025-12-16 13:58:50,623 [wrapper] pandaids: 6930661942
[2025-12-16 14:58:54] 2025-12-16 13:58:51,471 [wrapper] cleanup supervisor_pilot  6257 2680
[2025-12-16 14:58:54] 2025-12-16 13:58:51,574 [wrapper] Test setup, not cleaning
[2025-12-16 14:58:54] 2025-12-16 13:58:51,680 [wrapper] apfmon messages muted
[2025-12-16 14:58:54] 2025-12-16 13:58:51,758 [wrapper] ==== wrapper stdout END ====
[2025-12-16 14:58:54] 2025-12-16 13:58:51,852 [wrapper] ==== wrapper stderr END ====
[2025-12-16 14:58:54]  *** Error codes and diagnostics ***
[2025-12-16 14:58:54]     "exeErrorCode": 0,
[2025-12-16 14:58:54]     "exeErrorDiag": "",
[2025-12-16 14:58:54]     "pilotErrorCode": 0,
[2025-12-16 14:58:54]     "pilotErrorDiag": "",
[2025-12-16 14:58:54]  *** Listing of results directory ***
[2025-12-16 14:58:54] total 345220
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc    579449 Dec 16 05:16 pilot3.tar.gz
[2025-12-16 14:58:54] -rwx------. 1 boinc boinc     36322 Dec 16 05:19 runpilot2-wrapper.sh
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc      5112 Dec 16 05:22 queuedata.json
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc       100 Dec 16 10:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 14:58:54] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 10:17 run_atlas
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc       105 Dec 16 10:17 job.xml
[2025-12-16 14:58:54] -rw-r--r--. 2 boinc boinc 191317953 Dec 16 10:17 EVNT.47886829._000466.pool.root.1
[2025-12-16 14:58:54] drwxrwx--x. 2 boinc boinc        68 Dec 16 10:17 shared
[2025-12-16 14:58:54] -rw-r--r--. 2 boinc boinc    592413 Dec 16 10:17 input.tar.gz
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc      6391 Dec 16 10:17 init_data.xml
[2025-12-16 14:58:54] -rw-r--r--. 2 boinc boinc     15847 Dec 16 10:17 start_atlas.sh
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc         0 Dec 16 10:17 boinc_lockfile
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc      2539 Dec 16 10:17 pandaJob.out
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc    994525 Dec 16 10:21 agis_schedconf.cvmfs.json
[2025-12-16 14:58:54] drwx------. 5 boinc boinc      4096 Dec 16 10:21 pilot3
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc 152917238 Dec 16 14:54 HITS.47886831._011315.pool.root.1
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc       531 Dec 16 14:55 boinc_task_state.xml
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc      1014 Dec 16 14:55 memory_monitor_summary.json
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc   1516240 Dec 16 14:56 agis_ddmendpoints.agis.ALL.json
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc    482557 Dec 16 14:56 log.47886831._011315.job.log.tgz.1
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc        95 Dec 16 14:57 pilot_heartbeat.json
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc      7787 Dec 16 14:57 heartbeat.json
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc        28 Dec 16 14:58 wrapper_checkpoint.txt
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc      8192 Dec 16 14:58 boinc_mmap_file
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc      4884 Dec 16 14:58 pilotlog.txt
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc   2201289 Dec 16 14:58 log.47886831._011315.job.log.1
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc       357 Dec 16 14:58 output.list
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc       620 Dec 16 14:58 runtime_log
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc   2703360 Dec 16 14:58 result.tar.gz
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc       657 Dec 16 14:58 TD7LDmYibp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQyUKDm8D1jvm.diag
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc      8833 Dec 16 14:58 runtime_log.err
[2025-12-16 14:58:54] -rw-r--r--. 1 boinc boinc     20741 Dec 16 14:58 stderr.txt
[2025-12-16 14:58:54] HITS file was successfully produced:
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc 152917238 Dec 16 14:54 shared/HITS.pool.root.1
[2025-12-16 14:58:54]  *** Contents of shared directory: ***
[2025-12-16 14:58:54] total 339408
[2025-12-16 14:58:54] -rw-r--r--. 2 boinc boinc 191317953 Dec 16 10:17 ATLAS.root_0
[2025-12-16 14:58:54] -rw-r--r--. 2 boinc boinc    592413 Dec 16 10:17 input.tar.gz
[2025-12-16 14:58:54] -rw-r--r--. 2 boinc boinc     15847 Dec 16 10:17 start_atlas.sh
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc 152917238 Dec 16 14:54 HITS.pool.root.1
[2025-12-16 14:58:54] -rw-------. 1 boinc boinc   2703360 Dec 16 14:58 result.tar.gz
14:58:55 (31188): run_atlas exited; CPU time 62053.763779
14:58:55 (31188): called boinc_finish(0)

</stderr_txt>
]]>

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