Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:45:50 (14504): wrapper (7.7.26015): starting
03:45:50 (14504): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 03:45:50] Arguments: --nthreads 8
[2025-12-16 03:45:50] Threads: 8
[2025-12-16 03:45:50] Checking for CVMFS
[2025-12-16 03:45:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 03:45:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 03:45:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 03:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 03:45:51] 2.11.2.0 2929 21164 85312 154064 3 57 13347467 20275201 1 130560 0 6180575 99.888 1201916 28229 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 03:45:51] CVMFS is ok
[2025-12-16 03:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 03:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 03:45:51] Further information can be found at the LHC@home message board.
[2025-12-16 03:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 03:45:51] Checking for apptainer binary...
[2025-12-16 03:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 03:45:51] Running /usr/bin/apptainer --version
[2025-12-16 03:45:51] apptainer version 1.3.2-1.el7
[2025-12-16 03:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 03:45:52] c-115-9.aglt2.org
[2025-12-16 03:45:52] apptainer works
[2025-12-16 03:45:52] Set ATHENA_PROC_NUMBER=8
[2025-12-16 03:45:52] Set ATHENA_CORE_NUMBER=8
[2025-12-16 03:45:52] Starting ATLAS job with PandaID=6930758869
[2025-12-16 03:45:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 05:42:41]  *** The last 200 lines of the pilot log: ***
[2025-12-16 05:42:41] 2025-12-16 10:42:03,989 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 05:42:41] 2025-12-16 10:42:05,614 | INFO     | time since job start (6955s) is within the limit (174528.0s)
[2025-12-16 05:42:41] 2025-12-16 10:42:06,408 | INFO     | monitor loop #517: job 0:6930758869 is in state 'finished'
[2025-12-16 05:42:41] 2025-12-16 10:42:06,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 05:42:41] 2025-12-16 10:42:06,728 | INFO     | PID=18231 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 05:42:41] 2025-12-16 10:42:07,728 | INFO     | time since job start (6957s) is within the limit (174528.0s)
[2025-12-16 05:42:41] 2025-12-16 10:42:08,911 | INFO     | monitor loop #518: job 0:6930758869 is in state 'finished'
[2025-12-16 05:42:41] 2025-12-16 10:42:08,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,321 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 05:42:41] 2025-12-16 10:42:09,324 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930758869/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,327 | INFO     | extracted standard info from prmon json
[2025-12-16 05:42:41] 2025-12-16 10:42:09,327 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 05:42:41] 2025-12-16 10:42:09,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 05:42:41] 2025-12-16 10:42:09,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 05:42:41] 2025-12-16 10:42:09,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:42:41] 2025-12-16 10:42:09,331 | INFO     | fitting pss+swap vs Time
[2025-12-16 05:42:41] 2025-12-16 10:42:09,331 | INFO     | sum of square deviations: 459366752.5
[2025-12-16 05:42:41] 2025-12-16 10:42:09,332 | INFO     | sum of deviations: 3612090722.0000005
[2025-12-16 05:42:41] 2025-12-16 10:42:09,332 | INFO     | mean x: 1765878246.5
[2025-12-16 05:42:41] 2025-12-16 10:42:09,333 | INFO     | mean y: 2520511.035087719
[2025-12-16 05:42:41] 2025-12-16 10:42:09,333 | INFO     | intersect: -13882925912.004158
[2025-12-16 05:42:41] 2025-12-16 10:42:09,333 | INFO     | chi2: 1.4918944598049542
[2025-12-16 05:42:41] 2025-12-16 10:42:09,333 | INFO     | sum of square deviations: 401533110.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | sum of deviations: 3616442949.9999986
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | mean x: 1765878094.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | mean y: 2520522.5412844038
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | intersect: -15902014432.510704
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | chi2: 1.4940147248524391
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | current chi2=1.4940147248524391 (change=-0.14211897051767106 %)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,334 | INFO     | right removable region: 108
[2025-12-16 05:42:41] 2025-12-16 10:42:09,335 | INFO     | sum of square deviations: 401533110.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,335 | INFO     | sum of deviations: -12446741827.999998
[2025-12-16 05:42:41] 2025-12-16 10:42:09,335 | INFO     | mean x: 1765878399.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,335 | INFO     | mean y: 2561953.899082569
[2025-12-16 05:42:41] 2025-12-16 10:42:09,335 | INFO     | intersect: 54741341856.744385
[2025-12-16 05:42:41] 2025-12-16 10:42:09,336 | INFO     | chi2: 0.1007056618863116
[2025-12-16 05:42:41] 2025-12-16 10:42:09,336 | INFO     | current chi2=0.1007056618863116 (change=93.24981326765717 %)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,336 | INFO     | sum of square deviations: 348769330.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,336 | INFO     | sum of deviations: -10554236042.999996
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | mean x: 1765878551.5
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | mean y: 2556361.1346153845
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | intersect: 53440451992.04323
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | chi2: 0.08924077912398558
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | current chi2=0.08924077912398558 (change=11.384546357749901 %)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | left removable region: 20
[2025-12-16 05:42:41] 2025-12-16 10:42:09,337 | INFO     | sum of square deviations: 211285822.0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,338 | INFO     | sum of deviations: -3723825092.9999995
[2025-12-16 05:42:41] 2025-12-16 10:42:09,338 | INFO     | mean x: 1765878673.5
[2025-12-16 05:42:41] 2025-12-16 10:42:09,338 | INFO     | mean y: 2535186.2954545454
[2025-12-16 05:42:41] 2025-12-16 10:42:09,338 | INFO     | intersect: 31125415336.639156
[2025-12-16 05:42:41] 2025-12-16 10:42:09,338 | INFO     | chi2: 0.057470735982852496
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | current memory leak: -17.62 B/s (using 88 data points, chi2=0.06)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | could have reported an average CPU frequency of 2085 MHz (7 samples)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | ..............................
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | . Timing measurements:
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | . get job = 0 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | . initial setup = 2 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | . payload setup = 8 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,339 | INFO     | . stage-in = 0 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,340 | INFO     | . payload execution = 6921 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,340 | INFO     | . stage-out = 0 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,340 | INFO     | . log creation = 0 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,340 | INFO     | ..............................
[2025-12-16 05:42:41] 2025-12-16 10:42:09,421 | INFO     | 
[2025-12-16 05:42:41] 2025-12-16 10:42:09,421 | INFO     | job summary report
[2025-12-16 05:42:41] 2025-12-16 10:42:09,421 | INFO     | --------------------------------------------------
[2025-12-16 05:42:41] 2025-12-16 10:42:09,421 | INFO     | PanDA job id: 6930758869
[2025-12-16 05:42:41] 2025-12-16 10:42:09,421 | INFO     | task id: 47886831
[2025-12-16 05:42:41] 2025-12-16 10:42:09,422 | INFO     | errors: (none)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 05:42:41] 2025-12-16 10:42:09,422 | INFO     | pilot state: finished 
[2025-12-16 05:42:41] 2025-12-16 10:42:09,422 | INFO     | transexitcode: 0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,422 | INFO     | exeerrorcode: 0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,422 | INFO     | exeerrordiag: 
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | exitcode: 0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | exitmsg: OK
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | cpuconsumptiontime: 52048 s
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | nevents: 400
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | neventsw: 0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | pid: 24695
[2025-12-16 05:42:41] 2025-12-16 10:42:09,423 | INFO     | pgrp: 24695
[2025-12-16 05:42:41] 2025-12-16 10:42:09,424 | INFO     | corecount: 8
[2025-12-16 05:42:41] 2025-12-16 10:42:09,424 | INFO     | event service: False
[2025-12-16 05:42:41] 2025-12-16 10:42:09,424 | INFO     | sizes: {0: 2283105, 1: 2283961, 7: 2284223, 12: 2284251, 6933: 2311432, 6934: 2320613, 6936: 2320613, 6943: 2320807}
[2025-12-16 05:42:41] 2025-12-16 10:42:09,424 | INFO     | --------------------------------------------------
[2025-12-16 05:42:41] 2025-12-16 10:42:09,424 | INFO     | 
[2025-12-16 05:42:41] 2025-12-16 10:42:09,425 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 05:42:41] 2025-12-16 10:42:09,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,454 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,454 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 05:42:41] 2025-12-16 10:42:09,457 | INFO     | job 6930758869 has completed (purged errors)
[2025-12-16 05:42:41] 2025-12-16 10:42:09,458 | INFO     | overall cleanup function is called
[2025-12-16 05:42:41] 2025-12-16 10:42:10,466 | INFO     | --- collectZombieJob: --- 10, [24695]
[2025-12-16 05:42:41] 2025-12-16 10:42:10,466 | INFO     | zombie collector waiting for pid 24695
[2025-12-16 05:42:41] 2025-12-16 10:42:10,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 05:42:41] 2025-12-16 10:42:10,466 | INFO     | collected zombie processes
[2025-12-16 05:42:41] 2025-12-16 10:42:10,467 | INFO     | will attempt to kill all subprocesses of pid=24695
[2025-12-16 05:42:41] 2025-12-16 10:42:10,550 | INFO     | process IDs to be killed: [24695] (in reverse order)
[2025-12-16 05:42:41] 2025-12-16 10:42:10,604 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 05:42:41] 2025-12-16 10:42:10,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 05:42:41] 2025-12-16 10:42:10,609 | INFO     | did not find any defunct processes belonging to 24695
[2025-12-16 05:42:41] 2025-12-16 10:42:10,613 | INFO     | did not find any defunct processes belonging to 24695
[2025-12-16 05:42:41] 2025-12-16 10:42:10,613 | INFO     | ready for new job
[2025-12-16 05:42:41] 2025-12-16 10:42:10,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 05:42:41] 2025-12-16 10:42:10,614 | INFO     | ***************************************
[2025-12-16 05:42:41] 2025-12-16 10:42:10,614 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 05:42:41] 2025-12-16 10:42:10,614 | INFO     | ***************************************
[2025-12-16 05:42:41] 2025-12-16 10:42:10,615 | INFO     | 
[2025-12-16 05:42:41] 2025-12-16 10:42:10,615 | INFO     | architecture information:
[2025-12-16 05:42:41] 2025-12-16 10:42:10,616 | INFO     | executing command: cat /etc/os-release
[2025-12-16 05:42:41] 2025-12-16 10:42:10,634 | INFO     | cat /etc/os-release:
[2025-12-16 05:42:41] NAME="CentOS Linux"
[2025-12-16 05:42:41] VERSION="7 (Core)"
[2025-12-16 05:42:41] ID="centos"
[2025-12-16 05:42:41] ID_LIKE="rhel fedora"
[2025-12-16 05:42:41] VERSION_ID="7"
[2025-12-16 05:42:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 05:42:41] ANSI_COLOR="0;31"
[2025-12-16 05:42:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 05:42:41] HOME_URL="https://www.centos.org/"
[2025-12-16 05:42:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 05:42:41] 
[2025-12-16 05:42:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 05:42:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 05:42:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 05:42:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 05:42:41] 
[2025-12-16 05:42:41] 2025-12-16 10:42:10,634 | INFO     | ***************************************
[2025-12-16 05:42:41] 2025-12-16 10:42:11,138 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 05:42:41] 2025-12-16 10:42:11,158 | INFO     | sufficient remaining disk space (18683527168 B)
[2025-12-16 05:42:41] 2025-12-16 10:42:11,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 05:42:41] 2025-12-16 10:42:11,159 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 05:42:41] 2025-12-16 10:42:11,159 | INFO     | update_server=False
[2025-12-16 05:42:41] 2025-12-16 10:42:11,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 05:42:41] 2025-12-16 10:42:11,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:42:41] 2025-12-16 10:42:11,357 | INFO     | all data control threads have been joined
[2025-12-16 05:42:41] 2025-12-16 10:42:11,414 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 05:42:41] 2025-12-16 10:42:11,414 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 05:42:41] 2025-12-16 10:42:11,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:42:41] 2025-12-16 10:42:11,415 | INFO     | will abort loop
[2025-12-16 05:42:41] 2025-12-16 10:42:11,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 05:42:41] 2025-12-16 10:42:12,164 | INFO     | [job] queue monitor thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:12,165 | INFO     | [job] retrieve thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:12,287 | INFO     | all payload control threads have been joined
[2025-12-16 05:42:41] 2025-12-16 10:42:12,363 | INFO     | [data] control thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:12,420 | INFO     | [job] job monitor thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:12,425 | INFO     | [payload] validate_post thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:12,681 | INFO     | all job control threads have been joined
[2025-12-16 05:42:41] 2025-12-16 10:42:12,994 | INFO     | [data] copytool_in thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,000 | INFO     | [job] validate thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 05:42:41] 2025-12-16 10:42:13,151 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,265 | INFO     | [payload] failed_post thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,292 | INFO     | [payload] control thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,508 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,527 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,559 | INFO     | [data] copytool_out thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:13,687 | INFO     | [job] control thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:17,084 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 05:42:41] 2025-12-16 10:42:20,663 | INFO     | [monitor] cgroup control has ended
[2025-12-16 05:42:41] 2025-12-16 10:42:21,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451293157184)>', '<ExcThread(monitor, started 140450841216768)>']
[2025-12-16 05:42:41] 2025-12-16 10:42:26,583 | INFO     | all workflow threads have been joined
[2025-12-16 05:42:41] 2025-12-16 10:42:26,583 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 05:42:41] 2025-12-16 10:42:26,583 | INFO     | traces error code: 0
[2025-12-16 05:42:41] 2025-12-16 10:42:26,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 05:42:41] 2025-12-16 10:42:40,938 | INFO     | PID=18231 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 05:42:41] 2025-12-16 10:42:40,939 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 05:42:41] 2025-12-16 10:42:40,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 05:42:41] 2025-12-16 10:42:40,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 05:42:41] 2025-12-16 10:42:40,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 05:42:41] 2025-12-16 10:42:40,940 | INFO     | [monitor] control thread has ended
[2025-12-16 05:42:41] 2025-12-16 10:42:41,063 [wrapper] ==== pilot stdout END ====
[2025-12-16 05:42:41] 2025-12-16 10:42:41,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 05:42:41] 2025-12-16 10:42:41,072 [wrapper] pilotpid: 18231
[2025-12-16 05:42:41] 2025-12-16 10:42:41,077 [wrapper] Pilot exit status: 0
[2025-12-16 05:42:41] 2025-12-16 10:42:41,095 [wrapper] pandaids: 6930758869
[2025-12-16 05:42:41] 2025-12-16 10:42:41,137 [wrapper] cleanup supervisor_pilot 10920 18232
[2025-12-16 05:42:41] 2025-12-16 10:42:41,142 [wrapper] Test setup, not cleaning
[2025-12-16 05:42:41] 2025-12-16 10:42:41,146 [wrapper] apfmon messages muted
[2025-12-16 05:42:41] 2025-12-16 10:42:41,151 [wrapper] ==== wrapper stdout END ====
[2025-12-16 05:42:41] 2025-12-16 10:42:41,155 [wrapper] ==== wrapper stderr END ====
[2025-12-16 05:42:41]  *** Error codes and diagnostics ***
[2025-12-16 05:42:41]     "exeErrorCode": 0,
[2025-12-16 05:42:41]     "exeErrorDiag": "",
[2025-12-16 05:42:41]     "pilotErrorCode": 0,
[2025-12-16 05:42:41]     "pilotErrorDiag": "",
[2025-12-16 05:42:41]  *** Listing of results directory ***
[2025-12-16 05:42:41] total 333772
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 23:16 pilot3.tar.gz
[2025-12-16 05:42:41] -rwx------ 1 boincer umatlas     36322 Dec 15 23:17 runpilot2-wrapper.sh
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 23:17 queuedata.json
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas       100 Dec 16 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 05:42:41] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 03:45 run_atlas
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas       105 Dec 16 03:45 job.xml
[2025-12-16 05:42:41] -rw-r--r-- 2 boincer umatlas 191268652 Dec 16 03:45 EVNT.47886829._000215.pool.root.1
[2025-12-16 05:42:41] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 03:45 start_atlas.sh
[2025-12-16 05:42:41] drwxrwx--x 2 boincer umatlas      4096 Dec 16 03:45 shared
[2025-12-16 05:42:41] -rw-r--r-- 2 boincer umatlas    592418 Dec 16 03:45 input.tar.gz
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas         0 Dec 16 03:45 boinc_lockfile
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas      2534 Dec 16 03:45 pandaJob.out
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas        57 Dec 16 03:45 setup.sh.local
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas    994528 Dec 16 03:46 agis_schedconf.cvmfs.json
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas   1516240 Dec 16 03:46 agis_ddmendpoints.agis.ALL.json
[2025-12-16 05:42:41] drwx------ 5 boincer umatlas      4096 Dec 16 03:46 pilot3
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas      5909 Dec 16 05:39 init_data.xml
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas       530 Dec 16 05:41 boinc_task_state.xml
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas 143947474 Dec 16 05:41 HITS.47886831._011574.pool.root.1
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas      1059 Dec 16 05:41 memory_monitor_summary.json
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas    343272 Dec 16 05:42 log.47886831._011574.job.log.tgz.1
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas      7836 Dec 16 05:42 heartbeat.json
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas        27 Dec 16 05:42 wrapper_checkpoint.txt
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 05:42 boinc_mmap_file
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas        95 Dec 16 05:42 pilot_heartbeat.json
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas       745 Dec 16 05:42 pilotlog.txt
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas    983548 Dec 16 05:42 log.47886831._011574.job.log.1
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas       357 Dec 16 05:42 output.list
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas       620 Dec 16 05:42 runtime_log
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas   1341440 Dec 16 05:42 result.tar.gz
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas      9337 Dec 16 05:42 runtime_log.err
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas       658 Dec 16 05:42 5eALDmtfbp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpJZKDm0wqeXn.diag
[2025-12-16 05:42:41] -rw-r--r-- 1 boincer umatlas     21503 Dec 16 05:42 stderr.txt
[2025-12-16 05:42:41] HITS file was successfully produced:
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas 143947474 Dec 16 05:41 shared/HITS.pool.root.1
[2025-12-16 05:42:41]  *** Contents of shared directory: ***
[2025-12-16 05:42:41] total 329276
[2025-12-16 05:42:41] -rw-r--r-- 2 boincer umatlas 191268652 Dec 16 03:45 ATLAS.root_0
[2025-12-16 05:42:41] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 03:45 start_atlas.sh
[2025-12-16 05:42:41] -rw-r--r-- 2 boincer umatlas    592418 Dec 16 03:45 input.tar.gz
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas 143947474 Dec 16 05:41 HITS.pool.root.1
[2025-12-16 05:42:41] -rw------- 1 boincer umatlas   1341440 Dec 16 05:42 result.tar.gz
05:42:42 (14504): run_atlas exited; CPU time 52053.033393
05:42:42 (14504): called boinc_finish(0)

</stderr_txt>
]]>

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