Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:40:46 (1968587): wrapper (7.7.26015): starting
03:40:46 (1968587): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 03:40:46] Arguments: --nthreads 8
[2025-12-16 03:40:46] Threads: 8
[2025-12-16 03:40:46] Checking for CVMFS
[2025-12-16 03:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 03:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 03:40:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 03:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 03:40:48] 2.13.3.0 14328 58600 207924 154064 0 855 33650700 40960000 35664 16776704 0 712914009 99.688 577930882 49065 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 03:40:48] CVMFS is ok
[2025-12-16 03:40:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 03:40:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 03:40:48] Further information can be found at the LHC@home message board.
[2025-12-16 03:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 03:40:48] Checking for apptainer binary...
[2025-12-16 03:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 03:40:48] Running /usr/bin/apptainer --version
[2025-12-16 03:40:48] apptainer version 1.4.5-2.el9
[2025-12-16 03:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 03:40:49] c8-16-2.aglt2.org
[2025-12-16 03:40:49] apptainer works
[2025-12-16 03:40:49] Set ATHENA_PROC_NUMBER=8
[2025-12-16 03:40:49] Set ATHENA_CORE_NUMBER=8
[2025-12-16 03:40:49] Starting ATLAS job with PandaID=6929807216
[2025-12-16 03:40:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 06:26:49]  *** The last 200 lines of the pilot log: ***
[2025-12-16 06:26:49] 2025-12-16 11:25:45,968 | INFO     | time since job start (9831s) is within the limit (174528.0s)
[2025-12-16 06:26:49] 2025-12-16 11:25:47,985 | INFO     | time since job start (9833s) is within the limit (174528.0s)
[2025-12-16 06:26:49] 2025-12-16 11:25:48,187 | INFO     | monitor loop #653: job 0:6929807216 is in state 'finished'
[2025-12-16 06:26:49] 2025-12-16 11:25:48,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:26:49] 2025-12-16 11:25:50,018 | INFO     | time since job start (9836s) is within the limit (174528.0s)
[2025-12-16 06:26:49] 2025-12-16 11:25:50,692 | INFO     | monitor loop #654: job 0:6929807216 is in state 'finished'
[2025-12-16 06:26:49] 2025-12-16 11:25:50,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,024 | INFO     | time since job start (9838s) is within the limit (174528.0s)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,132 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 06:26:49] 2025-12-16 11:25:52,141 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0262734374996
[2025-12-16 06:26:49] 2025-12-16 11:25:52,170 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6929807216/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,170 | INFO     | extracted standard info from prmon json
[2025-12-16 06:26:49] 2025-12-16 11:25:52,170 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 06:26:49] 2025-12-16 11:25:52,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 06:26:49] 2025-12-16 11:25:52,171 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 06:26:49] 2025-12-16 11:25:52,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 06:26:49] 2025-12-16 11:25:52,173 | INFO     | fitting pss+swap vs Time
[2025-12-16 06:26:49] 2025-12-16 11:25:52,173 | INFO     | sum of square deviations: 1246383860.2389994
[2025-12-16 06:26:49] 2025-12-16 11:25:52,173 | INFO     | sum of deviations: 41007791971.97482
[2025-12-16 06:26:49] 2025-12-16 11:25:52,173 | INFO     | mean x: 1765879462.0691824
[2025-12-16 06:26:49] 2025-12-16 11:25:52,173 | INFO     | mean y: 2416017.7295597484
[2025-12-16 06:26:49] 2025-12-16 11:25:52,173 | INFO     | intersect: -58097516064.37393
[2025-12-16 06:26:49] 2025-12-16 11:25:52,174 | INFO     | chi2: 4.107515283798827
[2025-12-16 06:26:49] 2025-12-16 11:25:52,174 | INFO     | sum of square deviations: 1132430758.0844216
[2025-12-16 06:26:49] 2025-12-16 11:25:52,178 | INFO     | sum of deviations: 49378304575.87011
[2025-12-16 06:26:49] 2025-12-16 11:25:52,178 | INFO     | mean x: 1765879309.551948
[2025-12-16 06:26:49] 2025-12-16 11:25:52,178 | INFO     | mean y: 2426883.7662337665
[2025-12-16 06:26:49] 2025-12-16 11:25:52,178 | INFO     | intersect: -76996652988.2615
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | chi2: 3.4400972902168983
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | current chi2=3.4400972902168983 (change=16.24870383841077 %)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | right removable region: 153
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | sum of square deviations: 1132452787.7142856
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | sum of deviations: -3130148995.5714264
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | mean x: 1765879614.5714285
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | mean y: 2474859.1428571427
[2025-12-16 06:26:49] 2025-12-16 11:25:52,179 | INFO     | intersect: 4883443286.098045
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | chi2: 0.9132951050650895
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | current chi2=0.9132951050650895 (change=77.76526581246387 %)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | sum of square deviations: 1025684640.187922
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | sum of deviations: -13025116852.657717
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | mean x: 1765879767.0738256
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | mean y: 2488899.2416107384
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | intersect: 22427305858.25004
[2025-12-16 06:26:49] 2025-12-16 11:25:52,180 | INFO     | chi2: 0.7362055556002959
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | current chi2=0.7362055556002959 (change=19.3901783205301 %)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | left removable region: 20
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | sum of square deviations: 729443742.6315768
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | sum of deviations: -3134241134.368422
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | mean x: 1765879889.0526316
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | mean y: 2502250.6240601502
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | intersect: 7590055701.498111
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | chi2: 0.008488329203823801
[2025-12-16 06:26:49] 2025-12-16 11:25:52,181 | INFO     | current memory leak: -4.30 B/s (using 133 data points, chi2=0.01)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | ..............................
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | . Timing measurements:
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | . get job = 0 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | . initial setup = 5 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | . payload setup = 41 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,182 | INFO     | . stage-in = 0 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,184 | INFO     | . payload execution = 9696 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,184 | INFO     | . stage-out = 3 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,184 | INFO     | . log creation = 0 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,184 | INFO     | ..............................
[2025-12-16 06:26:49] 2025-12-16 11:25:52,689 | INFO     | 
[2025-12-16 06:26:49] 2025-12-16 11:25:52,689 | INFO     | job summary report
[2025-12-16 06:26:49] 2025-12-16 11:25:52,689 | INFO     | --------------------------------------------------
[2025-12-16 06:26:49] 2025-12-16 11:25:52,689 | INFO     | PanDA job id: 6929807216
[2025-12-16 06:26:49] 2025-12-16 11:25:52,689 | INFO     | task id: 47898826
[2025-12-16 06:26:49] 2025-12-16 11:25:52,689 | INFO     | errors: (none)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | pilot state: finished 
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | transexitcode: 0
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | exeerrorcode: 0
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | exeerrordiag: 
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | exitcode: 0
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | exitmsg: OK
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | cpuconsumptiontime: 32901 s
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | nevents: 400
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | neventsw: 0
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | pid: 1995757
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | pgrp: 1995757
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | corecount: 8
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | event service: False
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | sizes: {0: 2283734, 1: 2283989, 12: 2283989, 23: 2284017, 29: 2284307, 34: 2284335, 9742: 2313101, 9743: 2313100, 9746: 2322210, 9779: 2322412}
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | --------------------------------------------------
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | 
[2025-12-16 06:26:49] 2025-12-16 11:25:52,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-16 06:26:49] 2025-12-16 11:25:52,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,802 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 06:26:49] 2025-12-16 11:25:52,803 | INFO     | job 6929807216 has completed (purged errors)
[2025-12-16 06:26:49] 2025-12-16 11:25:52,803 | INFO     | overall cleanup function is called
[2025-12-16 06:26:49] 2025-12-16 11:25:53,810 | INFO     | --- collectZombieJob: --- 10, [1995757]
[2025-12-16 06:26:49] 2025-12-16 11:25:53,810 | INFO     | zombie collector waiting for pid 1995757
[2025-12-16 06:26:49] 2025-12-16 11:25:53,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 06:26:49] 2025-12-16 11:25:53,811 | INFO     | collected zombie processes
[2025-12-16 06:26:49] 2025-12-16 11:25:53,811 | INFO     | will attempt to kill all subprocesses of pid=1995757
[2025-12-16 06:26:49] 2025-12-16 11:25:55,357 | INFO     | process IDs to be killed: [1995757] (in reverse order)
[2025-12-16 06:26:49] 2025-12-16 11:25:55,689 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 06:26:49] 2025-12-16 11:25:55,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 06:26:49] 2025-12-16 11:25:55,757 | INFO     | did not find any defunct processes belonging to 1995757
[2025-12-16 06:26:49] 2025-12-16 11:25:55,812 | INFO     | did not find any defunct processes belonging to 1995757
[2025-12-16 06:26:49] 2025-12-16 11:25:55,812 | INFO     | ready for new job
[2025-12-16 06:26:49] 2025-12-16 11:25:55,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 06:26:49] 2025-12-16 11:25:55,814 | INFO     | ***************************************
[2025-12-16 06:26:49] 2025-12-16 11:25:55,814 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 06:26:49] 2025-12-16 11:25:55,814 | INFO     | ***************************************
[2025-12-16 06:26:49] 2025-12-16 11:25:55,814 | INFO     | 
[2025-12-16 06:26:49] 2025-12-16 11:25:55,822 | INFO     | architecture information:
[2025-12-16 06:26:49] 2025-12-16 11:25:55,826 | INFO     | executing command: cat /etc/os-release
[2025-12-16 06:26:49] 2025-12-16 11:25:55,892 | INFO     | cat /etc/os-release:
[2025-12-16 06:26:49] NAME="CentOS Linux"
[2025-12-16 06:26:49] VERSION="7 (Core)"
[2025-12-16 06:26:49] ID="centos"
[2025-12-16 06:26:49] ID_LIKE="rhel fedora"
[2025-12-16 06:26:49] VERSION_ID="7"
[2025-12-16 06:26:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 06:26:49] ANSI_COLOR="0;31"
[2025-12-16 06:26:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 06:26:49] HOME_URL="https://www.centos.org/"
[2025-12-16 06:26:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 06:26:49] 
[2025-12-16 06:26:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 06:26:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 06:26:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 06:26:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 06:26:49] 
[2025-12-16 06:26:49] 2025-12-16 11:25:55,893 | INFO     | ***************************************
[2025-12-16 06:26:49] 2025-12-16 11:25:56,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-16 06:26:49] 2025-12-16 11:25:56,548 | INFO     | sufficient remaining disk space (170486923264 B)
[2025-12-16 06:26:49] 2025-12-16 11:25:56,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 06:26:49] 2025-12-16 11:25:56,548 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 06:26:49] 2025-12-16 11:25:56,548 | INFO     | update_server=False
[2025-12-16 06:26:49] 2025-12-16 11:25:56,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 06:26:49] 2025-12-16 11:25:56,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 06:26:49] 2025-12-16 11:25:56,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:26:49] 2025-12-16 11:25:56,790 | INFO     | aborting loop
[2025-12-16 06:26:49] 2025-12-16 11:25:57,089 | INFO     | all job control threads have been joined
[2025-12-16 06:26:49] 2025-12-16 11:25:57,105 | INFO     | all data control threads have been joined
[2025-12-16 06:26:49] 2025-12-16 11:25:57,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 06:26:49] 2025-12-16 11:25:57,554 | INFO     | [job] retrieve thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:57,682 | INFO     | [data] copytool_in thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:57,757 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:57,802 | INFO     | [job] job monitor thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:57,820 | INFO     | all payload control threads have been joined
[2025-12-16 06:26:49] 2025-12-16 11:25:57,996 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 06:26:49] 2025-12-16 11:25:58,095 | INFO     | [job] control thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,112 | INFO     | [data] control thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,303 | INFO     | [payload] failed_post thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,315 | INFO     | [payload] validate_post thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,319 | INFO     | [job] validate thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,509 | INFO     | [job] queue monitor thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,566 | INFO     | [data] copytool_out thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,828 | INFO     | [payload] control thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:25:58,847 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:26:02,036 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:26:06,786 | INFO     | job.realtimelogging is not enabled
[2025-12-16 06:26:49] 2025-12-16 11:26:07,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 06:26:49] 2025-12-16 11:26:10,709 | INFO     | [monitor] cgroup control has ended
[2025-12-16 06:26:49] 2025-12-16 11:26:12,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524977243968)>', '<ExcThread(monitor, started 140524696602368)>']
[2025-12-16 06:26:49] 2025-12-16 11:26:17,134 | INFO     | all workflow threads have been joined
[2025-12-16 06:26:49] 2025-12-16 11:26:17,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 06:26:49] 2025-12-16 11:26:17,134 | INFO     | traces error code: 0
[2025-12-16 06:26:49] 2025-12-16 11:26:17,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 06:26:49] 2025-12-16 11:26:27,405 | INFO     | PID=1977198 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 06:26:49] 2025-12-16 11:26:27,405 | INFO     | .. there are 37 such processes running
[2025-12-16 06:26:49] 2025-12-16 11:26:27,405 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 06:26:49] 2025-12-16 11:26:27,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 06:26:49] 2025-12-16 11:26:27,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 06:26:49] 2025-12-16 11:26:27,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 06:26:49] 2025-12-16 11:26:27,406 | INFO     | [monitor] control thread has ended
[2025-12-16 06:26:49] 2025-12-16 11:26:28,484 [wrapper] ==== pilot stdout END ====
[2025-12-16 06:26:49] 2025-12-16 11:26:28,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 06:26:49] 2025-12-16 11:26:28,540 [wrapper] pilotpid: 1977198
[2025-12-16 06:26:49] 2025-12-16 11:26:28,586 [wrapper] Pilot exit status: 0
[2025-12-16 06:26:49] 2025-12-16 11:26:28,704 [wrapper] pandaids: 6929807216
[2025-12-16 06:26:49] 2025-12-16 11:26:29,407 [wrapper] cleanup supervisor_pilot 2889779 1977199
[2025-12-16 06:26:49] 2025-12-16 11:26:29,431 [wrapper] Test setup, not cleaning
[2025-12-16 06:26:49] 2025-12-16 11:26:29,454 [wrapper] apfmon messages muted
[2025-12-16 06:26:49] 2025-12-16 11:26:29,479 [wrapper] ==== wrapper stdout END ====
[2025-12-16 06:26:49] 2025-12-16 11:26:29,497 [wrapper] ==== wrapper stderr END ====
[2025-12-16 06:26:49]  *** Error codes and diagnostics ***
[2025-12-16 06:26:49]     "exeErrorCode": 0,
[2025-12-16 06:26:49]     "exeErrorDiag": "",
[2025-12-16 06:26:49]     "pilotErrorCode": 0,
[2025-12-16 06:26:49]     "pilotErrorDiag": "",
[2025-12-16 06:26:49]  *** Listing of results directory ***
[2025-12-16 06:26:49] total 436900
[2025-12-16 06:26:49] -rwx------. 1 boincer umatlas     36322 Dec 15 10:55 runpilot2-wrapper.sh
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 10:57 queuedata.json
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 10:57 pilot3.tar.gz
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas       100 Dec 16 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 06:26:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 03:40 run_atlas
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas       105 Dec 16 03:40 job.xml
[2025-12-16 06:26:49] -rw-r--r--. 2 boincer umatlas 225658504 Dec 16 03:40 EVNT.47898824._000069.pool.root.1
[2025-12-16 06:26:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 03:40 start_atlas.sh
[2025-12-16 06:26:49] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 03:40 shared
[2025-12-16 06:26:49] -rw-r--r--. 2 boincer umatlas    592385 Dec 16 03:40 input.tar.gz
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas         0 Dec 16 03:40 boinc_lockfile
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas      2514 Dec 16 03:40 pandaJob.out
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas        57 Dec 16 03:40 setup.sh.local
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas    994528 Dec 16 03:41 agis_schedconf.cvmfs.json
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas   1516240 Dec 16 03:41 agis_ddmendpoints.agis.ALL.json
[2025-12-16 06:26:49] drwx------. 5 boincer umatlas      4096 Dec 16 03:41 pilot3
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas      7172 Dec 16 06:20 init_data.xml
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas 214369200 Dec 16 06:24 HITS.47898826._001775.pool.root.1
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas       530 Dec 16 06:24 boinc_task_state.xml
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas      1048 Dec 16 06:25 memory_monitor_summary.json
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas    413157 Dec 16 06:25 log.47898826._001775.job.log.tgz.1
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas        95 Dec 16 06:25 pilot_heartbeat.json
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas      7810 Dec 16 06:25 heartbeat.json
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas       823 Dec 16 06:26 pilotlog.txt
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas   1307804 Dec 16 06:26 log.47898826._001775.job.log.1
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas       357 Dec 16 06:26 output.list
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas       620 Dec 16 06:26 runtime_log
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas   1740800 Dec 16 06:26 result.tar.gz
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas      9337 Dec 16 06:26 runtime_log.err
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas       657 Dec 16 06:26 oTTKDmP6Pp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCLYKDmHKejCo.diag
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas        27 Dec 16 06:26 wrapper_checkpoint.txt
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 06:26 boinc_mmap_file
[2025-12-16 06:26:49] -rw-r--r--. 1 boincer umatlas     21391 Dec 16 06:26 stderr.txt
[2025-12-16 06:26:49] HITS file was successfully produced:
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas 214369200 Dec 16 06:24 shared/HITS.pool.root.1
[2025-12-16 06:26:49]  *** Contents of shared directory: ***
[2025-12-16 06:26:49] total 432020
[2025-12-16 06:26:49] -rw-r--r--. 2 boincer umatlas 225658504 Dec 16 03:40 ATLAS.root_0
[2025-12-16 06:26:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 03:40 start_atlas.sh
[2025-12-16 06:26:49] -rw-r--r--. 2 boincer umatlas    592385 Dec 16 03:40 input.tar.gz
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas 214369200 Dec 16 06:24 HITS.pool.root.1
[2025-12-16 06:26:49] -rw-------. 1 boincer umatlas   1740800 Dec 16 06:26 result.tar.gz
06:26:51 (1968587): run_atlas exited; CPU time 33191.014535
06:26:51 (1968587): called boinc_finish(0)

</stderr_txt>
]]>

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