Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:12:40 (1808885): wrapper (7.7.26015): starting
03:12:40 (1808885): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 03:12:40] Arguments: --nthreads 8
[2025-12-16 03:12:40] Threads: 8
[2025-12-16 03:12:40] Checking for CVMFS
[2025-12-16 03:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 03:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 03:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 03:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 03:12:41] 2.13.3.0 14328 58572 208524 154063 0 709 31384920 40960000 35809 16776704 0 712462527 99.689 577240309 49068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 03:12:41] CVMFS is ok
[2025-12-16 03:12:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 03:12:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 03:12:41] Further information can be found at the LHC@home message board.
[2025-12-16 03:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 03:12:41] Checking for apptainer binary...
[2025-12-16 03:12:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 03:12:41] Running /usr/bin/apptainer --version
[2025-12-16 03:12:41] apptainer version 1.4.5-2.el9
[2025-12-16 03:12:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 03:12:42] c8-16-2.aglt2.org
[2025-12-16 03:12:42] apptainer works
[2025-12-16 03:12:42] Set ATHENA_PROC_NUMBER=8
[2025-12-16 03:12:42] Set ATHENA_CORE_NUMBER=8
[2025-12-16 03:12:42] Starting ATLAS job with PandaID=6929808483
[2025-12-16 03:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 05:09:16]  *** The last 200 lines of the pilot log: ***
[2025-12-16 05:09:16] 2025-12-16 10:08:27,485 | INFO     | time since job start (6869s) is within the limit (174528.0s)
[2025-12-16 05:09:16] 2025-12-16 10:08:29,492 | INFO     | time since job start (6871s) is within the limit (174528.0s)
[2025-12-16 05:09:16] 2025-12-16 10:08:29,520 | INFO     | monitor loop #455: job 0:6929808483 is in state 'finished'
[2025-12-16 05:09:16] 2025-12-16 10:08:29,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 05:09:16] 2025-12-16 10:08:31,788 | INFO     | PID=1821117 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 05:09:16] 2025-12-16 10:08:31,788 | INFO     | .. there are 36 such processes running
[2025-12-16 05:09:16] 2025-12-16 10:08:32,025 | INFO     | monitor loop #456: job 0:6929808483 is in state 'finished'
[2025-12-16 05:09:16] 2025-12-16 10:08:32,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,789 | INFO     | time since job start (6874s) is within the limit (174528.0s)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,899 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 05:09:16] 2025-12-16 10:08:32,908 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0295859374996
[2025-12-16 05:09:16] 2025-12-16 10:08:32,976 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6929808483/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,977 | INFO     | extracted standard info from prmon json
[2025-12-16 05:09:16] 2025-12-16 10:08:32,977 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 05:09:16] 2025-12-16 10:08:32,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 05:09:16] 2025-12-16 10:08:32,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 05:09:16] 2025-12-16 10:08:32,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 05:09:16] 2025-12-16 10:08:32,979 | INFO     | fitting pss+swap vs Time
[2025-12-16 05:09:16] 2025-12-16 10:08:32,979 | INFO     | sum of square deviations: 424037235.6756762
[2025-12-16 05:09:16] 2025-12-16 10:08:32,984 | INFO     | sum of deviations: 14516566275.405409
[2025-12-16 05:09:16] 2025-12-16 10:08:32,984 | INFO     | mean x: 1765876326.054054
[2025-12-16 05:09:16] 2025-12-16 10:08:32,984 | INFO     | mean y: 2455208.7657657657
[2025-12-16 05:09:16] 2025-12-16 10:08:32,984 | INFO     | intersect: -60450869557.59871
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | chi2: 4.922922451993898
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | sum of square deviations: 369275248.1603784
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | sum of deviations: 21602075244.056606
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | mean x: 1765876173.5566037
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | mean y: 2474182.4905660376
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | intersect: -103298762937.76512
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | chi2: 4.19417061229073
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | current chi2=4.19417061229073 (change=14.803236224206758 %)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | right removable region: 105
[2025-12-16 05:09:16] 2025-12-16 10:08:32,985 | INFO     | sum of square deviations: 369271588.1603784
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | sum of deviations: -19383139346.05661
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | mean x: 1765876478.5566037
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | mean y: 2549169.5094339624
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | intersect: 92693757887.46997
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | chi2: 0.9883634573628348
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | current chi2=0.9883634573628348 (change=79.92323732496487 %)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | sum of square deviations: 319436265.6435638
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | sum of deviations: -21830074138.514854
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | mean x: 1765876631.059406
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | mean y: 2556307.7524752477
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | intersect: 120681458240.92249
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | chi2: 0.8764189731996458
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | current chi2=0.8764189731996458 (change=11.326246769774437 %)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,986 | INFO     | left removable region: 20
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | sum of square deviations: 190396132.70588246
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | sum of deviations: -8770293758.352942
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | mean x: 1765876753.0588236
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | mean y: 2563673.870588235
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | intersect: 81344855900.44934
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | chi2: 0.027712035833414136
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | current memory leak: -46.06 B/s (using 85 data points, chi2=0.03)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-12-16 05:09:16] 2025-12-16 10:08:32,987 | INFO     | ..............................
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . Timing measurements:
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . get job = 0 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . initial setup = 5 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . payload setup = 40 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . stage-in = 0 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . payload execution = 6745 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . stage-out = 1 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | . log creation = 0 s
[2025-12-16 05:09:16] 2025-12-16 10:08:32,988 | INFO     | ..............................
[2025-12-16 05:09:16] 2025-12-16 10:08:33,210 | INFO     | 
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | job summary report
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | --------------------------------------------------
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | PanDA job id: 6929808483
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | task id: 47898826
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | errors: (none)
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | pilot state: finished 
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | transexitcode: 0
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | exeerrorcode: 0
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | exeerrordiag: 
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | exitcode: 0
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | exitmsg: OK
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | cpuconsumptiontime: 32369 s
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | nevents: 400
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | neventsw: 0
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | pid: 1836522
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | pgrp: 1836522
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | corecount: 8
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | event service: False
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | sizes: {0: 2283960, 1: 2283960, 11: 2283988, 23: 2284016, 31: 2284306, 33: 2284334, 6790: 2311671, 6791: 2320669, 6792: 2320725, 6812: 2320947}
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | --------------------------------------------------
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | 
[2025-12-16 05:09:16] 2025-12-16 10:08:33,211 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-16 05:09:16] 2025-12-16 10:08:33,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | job 6929808483 has completed (purged errors)
[2025-12-16 05:09:16] 2025-12-16 10:08:33,280 | INFO     | overall cleanup function is called
[2025-12-16 05:09:16] 2025-12-16 10:08:34,288 | INFO     | --- collectZombieJob: --- 10, [1836522]
[2025-12-16 05:09:16] 2025-12-16 10:08:34,289 | INFO     | zombie collector waiting for pid 1836522
[2025-12-16 05:09:16] 2025-12-16 10:08:34,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 05:09:16] 2025-12-16 10:08:34,289 | INFO     | collected zombie processes
[2025-12-16 05:09:16] 2025-12-16 10:08:34,289 | INFO     | will attempt to kill all subprocesses of pid=1836522
[2025-12-16 05:09:16] 2025-12-16 10:08:35,100 | INFO     | process IDs to be killed: [1836522] (in reverse order)
[2025-12-16 05:09:16] 2025-12-16 10:08:35,266 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 05:09:16] 2025-12-16 10:08:35,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 05:09:16] 2025-12-16 10:08:35,292 | INFO     | did not find any defunct processes belonging to 1836522
[2025-12-16 05:09:16] 2025-12-16 10:08:35,316 | INFO     | did not find any defunct processes belonging to 1836522
[2025-12-16 05:09:16] 2025-12-16 10:08:35,317 | INFO     | ready for new job
[2025-12-16 05:09:16] 2025-12-16 10:08:35,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 05:09:16] 2025-12-16 10:08:35,318 | INFO     | ***************************************
[2025-12-16 05:09:16] 2025-12-16 10:08:35,318 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 05:09:16] 2025-12-16 10:08:35,318 | INFO     | ***************************************
[2025-12-16 05:09:16] 2025-12-16 10:08:35,318 | INFO     | 
[2025-12-16 05:09:16] 2025-12-16 10:08:35,322 | INFO     | architecture information:
[2025-12-16 05:09:16] 2025-12-16 10:08:35,323 | INFO     | executing command: cat /etc/os-release
[2025-12-16 05:09:16] 2025-12-16 10:08:35,356 | INFO     | cat /etc/os-release:
[2025-12-16 05:09:16] NAME="CentOS Linux"
[2025-12-16 05:09:16] VERSION="7 (Core)"
[2025-12-16 05:09:16] ID="centos"
[2025-12-16 05:09:16] ID_LIKE="rhel fedora"
[2025-12-16 05:09:16] VERSION_ID="7"
[2025-12-16 05:09:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 05:09:16] ANSI_COLOR="0;31"
[2025-12-16 05:09:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 05:09:16] HOME_URL="https://www.centos.org/"
[2025-12-16 05:09:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 05:09:16] 
[2025-12-16 05:09:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 05:09:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 05:09:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 05:09:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 05:09:16] 
[2025-12-16 05:09:16] 2025-12-16 10:08:35,357 | INFO     | ***************************************
[2025-12-16 05:09:16] 2025-12-16 10:08:35,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-16 05:09:16] 2025-12-16 10:08:35,897 | INFO     | sufficient remaining disk space (170739630080 B)
[2025-12-16 05:09:16] 2025-12-16 10:08:35,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 05:09:16] 2025-12-16 10:08:35,898 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 05:09:16] 2025-12-16 10:08:35,898 | INFO     | update_server=False
[2025-12-16 05:09:16] 2025-12-16 10:08:35,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 05:09:16] 2025-12-16 10:08:35,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 05:09:16] 2025-12-16 10:08:35,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:09:16] 2025-12-16 10:08:35,899 | INFO     | aborting loop
[2025-12-16 05:09:16] 2025-12-16 10:08:36,036 | INFO     | all data control threads have been joined
[2025-12-16 05:09:16] 2025-12-16 10:08:36,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 05:09:16] 2025-12-16 10:08:36,733 | INFO     | all payload control threads have been joined
[2025-12-16 05:09:16] 2025-12-16 10:08:36,812 | INFO     | all job control threads have been joined
[2025-12-16 05:09:16] 2025-12-16 10:08:36,903 | INFO     | [job] retrieve thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:36,904 | INFO     | [job] job monitor thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,042 | INFO     | [data] control thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,312 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,411 | INFO     | [payload] failed_post thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,449 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,621 | INFO     | [payload] validate_post thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,740 | INFO     | [payload] control thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,828 | INFO     | [job] control thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:37,905 | INFO     | [data] copytool_out thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:38,062 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:38,211 | INFO     | [job] validate thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:38,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 05:09:16] 2025-12-16 10:08:38,254 | INFO     | [data] copytool_in thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:39,235 | INFO     | [job] queue monitor thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:08:40,534 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 05:09:16] 2025-12-16 10:09:06,543 | INFO     | PID=1821117 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 05:09:16] 2025-12-16 10:09:06,543 | INFO     | .. there are 36 such processes running
[2025-12-16 05:09:16] 2025-12-16 10:09:06,543 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 05:09:16] 2025-12-16 10:09:06,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 05:09:16] 2025-12-16 10:09:06,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 05:09:16] 2025-12-16 10:09:09,731 | INFO     | [monitor] cgroup control has ended
[2025-12-16 05:09:16] 2025-12-16 10:09:10,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744654456640)>', '<ExcThread(monitor, started 139744293918464)>']
[2025-12-16 05:09:16] 2025-12-16 10:09:10,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 05:09:16] 2025-12-16 10:09:10,569 | INFO     | [monitor] control thread has ended
[2025-12-16 05:09:16] 2025-12-16 10:09:15,294 | INFO     | all workflow threads have been joined
[2025-12-16 05:09:16] 2025-12-16 10:09:15,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 05:09:16] 2025-12-16 10:09:15,295 | INFO     | traces error code: 0
[2025-12-16 05:09:16] 2025-12-16 10:09:15,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 05:09:16] 2025-12-16 10:09:15,748 [wrapper] ==== pilot stdout END ====
[2025-12-16 05:09:16] 2025-12-16 10:09:15,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 05:09:16] 2025-12-16 10:09:15,835 [wrapper] pilotpid: 1821117
[2025-12-16 05:09:16] 2025-12-16 10:09:15,860 [wrapper] Pilot exit status: 0
[2025-12-16 05:09:16] 2025-12-16 10:09:15,987 [wrapper] pandaids: 6929808483
[2025-12-16 05:09:16] 2025-12-16 10:09:16,176 [wrapper] cleanup supervisor_pilot 2458959 1821118
[2025-12-16 05:09:16] 2025-12-16 10:09:16,215 [wrapper] Test setup, not cleaning
[2025-12-16 05:09:16] 2025-12-16 10:09:16,245 [wrapper] apfmon messages muted
[2025-12-16 05:09:16] 2025-12-16 10:09:16,272 [wrapper] ==== wrapper stdout END ====
[2025-12-16 05:09:16] 2025-12-16 10:09:16,304 [wrapper] ==== wrapper stderr END ====
[2025-12-16 05:09:16]  *** Error codes and diagnostics ***
[2025-12-16 05:09:16]     "exeErrorCode": 0,
[2025-12-16 05:09:16]     "exeErrorDiag": "",
[2025-12-16 05:09:16]     "pilotErrorCode": 0,
[2025-12-16 05:09:16]     "pilotErrorDiag": "",
[2025-12-16 05:09:16]  *** Listing of results directory ***
[2025-12-16 05:09:16] total 440228
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 10:52 pilot3.tar.gz
[2025-12-16 05:09:16] -rwx------. 1 boincer umatlas     36322 Dec 15 10:53 runpilot2-wrapper.sh
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 10:53 queuedata.json
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas       100 Dec 16 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 05:09:16] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 03:12 run_atlas
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas       105 Dec 16 03:12 job.xml
[2025-12-16 05:09:16] -rw-r--r--. 2 boincer umatlas 226452870 Dec 16 03:12 EVNT.47898824._000093.pool.root.1
[2025-12-16 05:09:16] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 03:12 start_atlas.sh
[2025-12-16 05:09:16] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 03:12 shared
[2025-12-16 05:09:16] -rw-r--r--. 2 boincer umatlas    592388 Dec 16 03:12 input.tar.gz
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas         0 Dec 16 03:12 boinc_lockfile
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas      2513 Dec 16 03:12 pandaJob.out
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas        57 Dec 16 03:12 setup.sh.local
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas    994531 Dec 16 03:13 agis_schedconf.cvmfs.json
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas   1516240 Dec 16 03:13 agis_ddmendpoints.agis.ALL.json
[2025-12-16 05:09:16] drwx------. 5 boincer umatlas      4096 Dec 16 03:13 pilot3
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas      7173 Dec 16 05:04 init_data.xml
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas 217857758 Dec 16 05:07 HITS.47898826._002365.pool.root.1
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas       530 Dec 16 05:07 boinc_task_state.xml
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas      1045 Dec 16 05:08 memory_monitor_summary.json
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas    355439 Dec 16 05:08 log.47898826._002365.job.log.tgz.1
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas      7784 Dec 16 05:08 heartbeat.json
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas        95 Dec 16 05:09 pilot_heartbeat.json
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 05:09 boinc_mmap_file
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas        27 Dec 16 05:09 wrapper_checkpoint.txt
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas      4825 Dec 16 05:09 pilotlog.txt
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas    923750 Dec 16 05:09 log.47898826._002365.job.log.1
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas       357 Dec 16 05:09 output.list
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas       620 Dec 16 05:09 runtime_log
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas   1300480 Dec 16 05:09 result.tar.gz
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas       655 Dec 16 05:09 xMpMDmp3Pp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUGYKDmwbQkHo.diag
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas      9337 Dec 16 05:09 runtime_log.err
[2025-12-16 05:09:16] -rw-r--r--. 1 boincer umatlas     21497 Dec 16 05:09 stderr.txt
[2025-12-16 05:09:16] HITS file was successfully produced:
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas 217857758 Dec 16 05:07 shared/HITS.pool.root.1
[2025-12-16 05:09:16]  *** Contents of shared directory: ***
[2025-12-16 05:09:16] total 435776
[2025-12-16 05:09:16] -rw-r--r--. 2 boincer umatlas 226452870 Dec 16 03:12 ATLAS.root_0
[2025-12-16 05:09:16] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 03:12 start_atlas.sh
[2025-12-16 05:09:16] -rw-r--r--. 2 boincer umatlas    592388 Dec 16 03:12 input.tar.gz
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas 217857758 Dec 16 05:07 HITS.pool.root.1
[2025-12-16 05:09:16] -rw-------. 1 boincer umatlas   1300480 Dec 16 05:09 result.tar.gz
05:09:17 (1808885): run_atlas exited; CPU time 32594.012176
05:09:17 (1808885): called boinc_finish(0)

</stderr_txt>
]]>

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