Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:01:39 (4731): wrapper (7.7.26015): starting
03:01:39 (4731): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 03:01:39] Arguments: --nthreads 12
[2025-12-16 03:01:39] Threads: 12
[2025-12-16 03:01:39] Checking for CVMFS
[2025-12-16 03:01:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 03:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 03:01:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 03:01:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 03:01:40] 2.11.2.0 25590 216896 94256 154063 1 57 13376217 20275200 1 130560 2 110855843 99.963 9100423 27794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 03:01:40] CVMFS is ok
[2025-12-16 03:01:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 03:01:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 03:01:40] Further information can be found at the LHC@home message board.
[2025-12-16 03:01:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 03:01:40] Checking for apptainer binary...
[2025-12-16 03:01:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 03:01:40] Running /usr/bin/apptainer --version
[2025-12-16 03:01:40] apptainer version 1.3.2-1.el7
[2025-12-16 03:01:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 03:01:41] c-205-24.aglt2.org
[2025-12-16 03:01:41] apptainer works
[2025-12-16 03:01:41] Set ATHENA_PROC_NUMBER=12
[2025-12-16 03:01:41] Set ATHENA_CORE_NUMBER=12
[2025-12-16 03:01:41] Starting ATLAS job with PandaID=6930225483
[2025-12-16 03:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 04:23:11]  *** The last 200 lines of the pilot log: ***
[2025-12-16 04:23:11]  scope=mc23_13p6TeV
[2025-12-16 04:23:11]  status=None
[2025-12-16 04:23:11]  status_code=0
[2025-12-16 04:23:11]  storage_token=
[2025-12-16 04:23:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6930225483/log.47886831._010262.job.log.tgz.1
[2025-12-16 04:23:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/23/log.47886831._010262.job.log.tgz.1
[2025-12-16 04:23:11]  workdir=None
[2025-12-16 04:23:11] ]
[2025-12-16 04:23:11] 2025-12-16 09:22:27,180 | INFO     | transferring file log.47886831._010262.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6930225483/log.47886831._010262.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 04:23:11] 2025-12-16 09:22:27,180 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6930225483/log.47886831._010262.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._010262.job
[2025-12-16 04:23:11] 2025-12-16 09:22:27,204 | INFO     | adding to output.list: log.47886831._010262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/23/log.47886831._010262.job.log.tg
[2025-12-16 04:23:11] 2025-12-16 09:22:27,204 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 04:23:11] 2025-12-16 09:22:27,205 | INFO     | summary of transferred files:
[2025-12-16 04:23:11] 2025-12-16 09:22:27,205 | INFO     |  -- lfn=log.47886831._010262.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 04:23:11] 2025-12-16 09:22:27,205 | INFO     | stage-out finished correctly
[2025-12-16 04:23:11] 2025-12-16 09:22:27,977 | INFO     | monitor loop #360: job 0:6930225483 is in state 'finished'
[2025-12-16 04:23:11] 2025-12-16 09:22:27,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 04:23:11] 2025-12-16 09:22:28,059 | INFO     | time since job start (4831s) is within the limit (174528.0s)
[2025-12-16 04:23:11] 2025-12-16 09:22:29,824 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 04:23:11] 2025-12-16 09:22:30,064 | INFO     | time since job start (4833s) is within the limit (174528.0s)
[2025-12-16 04:23:11] 2025-12-16 09:22:30,481 | INFO     | monitor loop #361: job 0:6930225483 is in state 'finished'
[2025-12-16 04:23:11] 2025-12-16 09:22:30,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 04:23:11] 2025-12-16 09:22:32,070 | INFO     | time since job start (4835s) is within the limit (174528.0s)
[2025-12-16 04:23:11] 2025-12-16 09:22:32,877 | INFO     | job 6930225483 has state=finished
[2025-12-16 04:23:11] 2025-12-16 09:22:32,877 | INFO     | preparing for final server update for job 6930225483 in state='finished'
[2025-12-16 04:23:11] 2025-12-16 09:22:32,878 | INFO     | this job has now completed (state=finished)
[2025-12-16 04:23:11] 2025-12-16 09:22:32,878 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 04:23:11] 2025-12-16 09:22:32,878 | INFO     | log transfer has been attempted: DONE
[2025-12-16 04:23:11] 2025-12-16 09:22:32,878 | INFO     | job 6930225483 has finished - writing final server update
[2025-12-16 04:23:11] 2025-12-16 09:22:32,879 | INFO     | total number of processed events: 400 (read)
[2025-12-16 04:23:11] 2025-12-16 09:22:32,880 | INFO     | executing command: lscpu
[2025-12-16 04:23:11] 2025-12-16 09:22:32,905 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 04:23:11] 2025-12-16 09:22:32,984 | INFO     | monitor loop #362: job 0:6930225483 is in state 'finished'
[2025-12-16 04:23:11] 2025-12-16 09:22:32,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 04:23:11] 2025-12-16 09:22:34,071 | INFO     | time since job start (4837s) is within the limit (174528.0s)
[2025-12-16 04:23:11] 2025-12-16 09:22:35,487 | INFO     | monitor loop #363: job 0:6930225483 is in state 'finished'
[2025-12-16 04:23:11] 2025-12-16 09:22:35,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 04:23:11] 2025-12-16 09:22:36,077 | INFO     | time since job start (4839s) is within the limit (174528.0s)
[2025-12-16 04:23:11] 2025-12-16 09:22:37,197 | INFO     | PID=8421 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 04:23:11] 2025-12-16 09:22:37,683 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 04:23:11] 2025-12-16 09:22:37,687 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-16 04:23:11] 2025-12-16 09:22:37,689 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930225483/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 04:23:11] 2025-12-16 09:22:37,690 | INFO     | extracted standard info from prmon json
[2025-12-16 04:23:11] 2025-12-16 09:22:37,690 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 04:23:11] 2025-12-16 09:22:37,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 04:23:11] 2025-12-16 09:22:37,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 04:23:11] 2025-12-16 09:22:37,691 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 04:23:11] 2025-12-16 09:22:37,692 | INFO     | fitting pss+swap vs Time
[2025-12-16 04:23:11] 2025-12-16 09:22:37,693 | INFO     | sum of square deviations: 115715658.0
[2025-12-16 04:23:11] 2025-12-16 09:22:37,693 | INFO     | sum of deviations: -2853988120.5
[2025-12-16 04:23:11] 2025-12-16 09:22:37,693 | INFO     | mean x: 1765874616.5
[2025-12-16 04:23:11] 2025-12-16 09:22:37,693 | INFO     | mean y: 2684743.263888889
[2025-12-16 04:23:11] 2025-12-16 09:22:37,693 | INFO     | intersect: 43555867302.04511
[2025-12-16 04:23:11] 2025-12-16 09:22:37,693 | INFO     | chi2: 0.040831359691397354
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | current memory leak: -24.66 B/s (using 72 data points, chi2=0.04)
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | could have reported an average CPU frequency of 2063 MHz (6 samples)
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | ..............................
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | . Timing measurements:
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | . get job = 0 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | . initial setup = 3 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,694 | INFO     | . payload setup = 7 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,695 | INFO     | . stage-in = 0 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,695 | INFO     | . payload execution = 4802 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,695 | INFO     | . stage-out = 0 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,695 | INFO     | . log creation = 0 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,695 | INFO     | ..............................
[2025-12-16 04:23:11] 2025-12-16 09:22:37,974 | INFO     | 
[2025-12-16 04:23:11] 2025-12-16 09:22:37,975 | INFO     | job summary report
[2025-12-16 04:23:11] 2025-12-16 09:22:37,975 | INFO     | --------------------------------------------------
[2025-12-16 04:23:11] 2025-12-16 09:22:37,975 | INFO     | PanDA job id: 6930225483
[2025-12-16 04:23:11] 2025-12-16 09:22:37,975 | INFO     | task id: 47886831
[2025-12-16 04:23:11] 2025-12-16 09:22:37,975 | INFO     | errors: (none)
[2025-12-16 04:23:11] 2025-12-16 09:22:37,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 04:23:11] 2025-12-16 09:22:37,976 | INFO     | pilot state: finished 
[2025-12-16 04:23:11] 2025-12-16 09:22:37,976 | INFO     | transexitcode: 0
[2025-12-16 04:23:11] 2025-12-16 09:22:37,976 | INFO     | exeerrorcode: 0
[2025-12-16 04:23:11] 2025-12-16 09:22:37,976 | INFO     | exeerrordiag: 
[2025-12-16 04:23:11] 2025-12-16 09:22:37,976 | INFO     | exitcode: 0
[2025-12-16 04:23:11] 2025-12-16 09:22:37,977 | INFO     | exitmsg: OK
[2025-12-16 04:23:11] 2025-12-16 09:22:37,977 | INFO     | cpuconsumptiontime: 52824 s
[2025-12-16 04:23:11] 2025-12-16 09:22:37,977 | INFO     | nevents: 400
[2025-12-16 04:23:11] 2025-12-16 09:22:37,977 | INFO     | neventsw: 0
[2025-12-16 04:23:11] 2025-12-16 09:22:37,977 | INFO     | pid: 14854
[2025-12-16 04:23:11] 2025-12-16 09:22:37,977 | INFO     | pgrp: 14854
[2025-12-16 04:23:11] 2025-12-16 09:22:37,978 | INFO     | corecount: 12
[2025-12-16 04:23:11] 2025-12-16 09:22:37,978 | INFO     | event service: False
[2025-12-16 04:23:11] 2025-12-16 09:22:37,978 | INFO     | sizes: {0: 2283165, 1: 2284021, 6: 2284283, 12: 2284311, 4813: 2310493, 4814: 2319674, 4817: 2319674, 4825: 2319868}
[2025-12-16 04:23:11] 2025-12-16 09:22:37,978 | INFO     | --------------------------------------------------
[2025-12-16 04:23:11] 2025-12-16 09:22:37,978 | INFO     | 
[2025-12-16 04:23:11] 2025-12-16 09:22:37,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 04:23:11] 2025-12-16 09:22:38,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 04:23:11] 2025-12-16 09:22:38,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,052 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 04:23:11] 2025-12-16 09:22:38,052 | INFO     | job 6930225483 has completed (purged errors)
[2025-12-16 04:23:11] 2025-12-16 09:22:38,052 | INFO     | overall cleanup function is called
[2025-12-16 04:23:11] 2025-12-16 09:22:39,061 | INFO     | --- collectZombieJob: --- 10, [14854]
[2025-12-16 04:23:11] 2025-12-16 09:22:39,061 | INFO     | zombie collector waiting for pid 14854
[2025-12-16 04:23:11] 2025-12-16 09:22:39,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 04:23:11] 2025-12-16 09:22:39,061 | INFO     | collected zombie processes
[2025-12-16 04:23:11] 2025-12-16 09:22:39,061 | INFO     | will attempt to kill all subprocesses of pid=14854
[2025-12-16 04:23:11] 2025-12-16 09:22:39,154 | INFO     | process IDs to be killed: [14854] (in reverse order)
[2025-12-16 04:23:11] 2025-12-16 09:22:39,206 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 04:23:11] 2025-12-16 09:22:39,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 04:23:11] 2025-12-16 09:22:39,209 | INFO     | did not find any defunct processes belonging to 14854
[2025-12-16 04:23:11] 2025-12-16 09:22:39,211 | INFO     | did not find any defunct processes belonging to 14854
[2025-12-16 04:23:11] 2025-12-16 09:22:39,212 | INFO     | ready for new job
[2025-12-16 04:23:11] 2025-12-16 09:22:39,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 04:23:11] 2025-12-16 09:22:39,213 | INFO     | ***************************************
[2025-12-16 04:23:11] 2025-12-16 09:22:39,213 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 04:23:11] 2025-12-16 09:22:39,213 | INFO     | ***************************************
[2025-12-16 04:23:11] 2025-12-16 09:22:39,213 | INFO     | 
[2025-12-16 04:23:11] 2025-12-16 09:22:39,214 | INFO     | architecture information:
[2025-12-16 04:23:11] 2025-12-16 09:22:39,214 | INFO     | executing command: cat /etc/os-release
[2025-12-16 04:23:11] 2025-12-16 09:22:39,229 | INFO     | cat /etc/os-release:
[2025-12-16 04:23:11] NAME="CentOS Linux"
[2025-12-16 04:23:11] VERSION="7 (Core)"
[2025-12-16 04:23:11] ID="centos"
[2025-12-16 04:23:11] ID_LIKE="rhel fedora"
[2025-12-16 04:23:11] VERSION_ID="7"
[2025-12-16 04:23:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 04:23:11] ANSI_COLOR="0;31"
[2025-12-16 04:23:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 04:23:11] HOME_URL="https://www.centos.org/"
[2025-12-16 04:23:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 04:23:11] 
[2025-12-16 04:23:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 04:23:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 04:23:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 04:23:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 04:23:11] 
[2025-12-16 04:23:11] 2025-12-16 09:22:39,229 | INFO     | ***************************************
[2025-12-16 04:23:11] 2025-12-16 09:22:39,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 04:23:11] 2025-12-16 09:22:39,750 | INFO     | sufficient remaining disk space (29444014080 B)
[2025-12-16 04:23:11] 2025-12-16 09:22:39,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 04:23:11] 2025-12-16 09:22:39,751 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 04:23:11] 2025-12-16 09:22:39,751 | INFO     | update_server=False
[2025-12-16 04:23:11] 2025-12-16 09:22:39,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 04:23:11] 2025-12-16 09:22:39,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:23:11] 2025-12-16 09:22:39,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 04:23:11] 2025-12-16 09:22:39,752 | INFO     | aborting loop
[2025-12-16 04:23:11] 2025-12-16 09:22:40,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 04:23:11] 2025-12-16 09:22:40,385 | INFO     | all job control threads have been joined
[2025-12-16 04:23:11] 2025-12-16 09:22:40,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 04:23:11] 2025-12-16 09:22:40,497 | INFO     | all data control threads have been joined
[2025-12-16 04:23:11] 2025-12-16 09:22:40,749 | INFO     | all payload control threads have been joined
[2025-12-16 04:23:11] 2025-12-16 09:22:40,757 | INFO     | [job] retrieve thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:40,757 | INFO     | [job] queue monitor thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:40,758 | INFO     | [job] job monitor thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:40,832 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:40,842 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:40,904 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:40,913 | INFO     | [payload] failed_post thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,390 | INFO     | [job] control thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,479 | INFO     | [data] copytool_in thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,502 | INFO     | [data] control thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,754 | INFO     | [payload] control thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,882 | INFO     | [payload] validate_post thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:41,900 | INFO     | [job] validate thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:42,310 | INFO     | [data] copytool_out thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:22:44,417 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 04:23:11] 2025-12-16 09:23:04,468 | INFO     | [monitor] cgroup control has ended
[2025-12-16 04:23:11] 2025-12-16 09:23:06,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339434837824)>', '<ExcThread(monitor, started 140338702305024)>']
[2025-12-16 04:23:11] 2025-12-16 09:23:09,399 | INFO     | PID=8421 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 04:23:11] 2025-12-16 09:23:09,400 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 04:23:11] 2025-12-16 09:23:09,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 04:23:11] 2025-12-16 09:23:09,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 04:23:11] 2025-12-16 09:23:09,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 04:23:11] 2025-12-16 09:23:09,400 | INFO     | [monitor] control thread has ended
[2025-12-16 04:23:11] 2025-12-16 09:23:11,354 | INFO     | all workflow threads have been joined
[2025-12-16 04:23:11] 2025-12-16 09:23:11,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 04:23:11] 2025-12-16 09:23:11,354 | INFO     | traces error code: 0
[2025-12-16 04:23:11] 2025-12-16 09:23:11,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 04:23:11] 2025-12-16 09:23:11,444 [wrapper] ==== pilot stdout END ====
[2025-12-16 04:23:11] 2025-12-16 09:23:11,448 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 04:23:11] 2025-12-16 09:23:11,452 [wrapper] pilotpid: 8421
[2025-12-16 04:23:11] 2025-12-16 09:23:11,456 [wrapper] Pilot exit status: 0
[2025-12-16 04:23:11] 2025-12-16 09:23:11,473 [wrapper] pandaids: 6930225483
[2025-12-16 04:23:11] 2025-12-16 09:23:11,514 [wrapper] cleanup supervisor_pilot 10307 8422
[2025-12-16 04:23:11] 2025-12-16 09:23:11,518 [wrapper] Test setup, not cleaning
[2025-12-16 04:23:11] 2025-12-16 09:23:11,521 [wrapper] apfmon messages muted
[2025-12-16 04:23:11] 2025-12-16 09:23:11,525 [wrapper] ==== wrapper stdout END ====
[2025-12-16 04:23:11] 2025-12-16 09:23:11,529 [wrapper] ==== wrapper stderr END ====
[2025-12-16 04:23:11]  *** Error codes and diagnostics ***
[2025-12-16 04:23:11]     "exeErrorCode": 0,
[2025-12-16 04:23:11]     "exeErrorDiag": "",
[2025-12-16 04:23:11]     "pilotErrorCode": 0,
[2025-12-16 04:23:11]     "pilotErrorDiag": "",
[2025-12-16 04:23:11]  *** Listing of results directory ***
[2025-12-16 04:23:11] total 346144
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 15:57 pilot3.tar.gz
[2025-12-16 04:23:11] -rwx------ 1 boincer umatlas     36322 Dec 15 16:01 runpilot2-wrapper.sh
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 16:03 queuedata.json
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas       100 Dec 16 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 04:23:11] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 03:01 run_atlas
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas       105 Dec 16 03:01 job.xml
[2025-12-16 04:23:11] -rw-r--r-- 2 boincer umatlas 193649912 Dec 16 03:01 EVNT.47886829._000405.pool.root.1
[2025-12-16 04:23:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 03:01 start_atlas.sh
[2025-12-16 04:23:11] drwxrwx--x 2 boincer umatlas      4096 Dec 16 03:01 shared
[2025-12-16 04:23:11] -rw-r--r-- 2 boincer umatlas    592408 Dec 16 03:01 input.tar.gz
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas         0 Dec 16 03:01 boinc_lockfile
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas      2539 Dec 16 03:01 pandaJob.out
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas        57 Dec 16 03:01 setup.sh.local
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas    994531 Dec 16 03:01 agis_schedconf.cvmfs.json
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas   1516240 Dec 16 03:01 agis_ddmendpoints.agis.ALL.json
[2025-12-16 04:23:11] drwx------ 5 boincer umatlas      4096 Dec 16 03:01 pilot3
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 04:19 init_data.xml
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas       529 Dec 16 04:21 boinc_task_state.xml
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas 154713849 Dec 16 04:21 HITS.47886831._010262.pool.root.1
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas      1044 Dec 16 04:22 memory_monitor_summary.json
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas    385919 Dec 16 04:22 log.47886831._010262.job.log.tgz.1
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas      7843 Dec 16 04:22 heartbeat.json
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas        27 Dec 16 04:23 wrapper_checkpoint.txt
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 04:23 boinc_mmap_file
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas        95 Dec 16 04:23 pilot_heartbeat.json
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas      4745 Dec 16 04:23 pilotlog.txt
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas    697793 Dec 16 04:23 log.47886831._010262.job.log.1
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas       357 Dec 16 04:23 output.list
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas       620 Dec 16 04:23 runtime_log
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas   1105920 Dec 16 04:23 result.tar.gz
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas       659 Dec 16 04:23 XQyLDmrrUp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdOUKDmtcZiJn.diag
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 04:23 runtime_log.err
[2025-12-16 04:23:11] -rw-r--r-- 1 boincer umatlas     22099 Dec 16 04:23 stderr.txt
[2025-12-16 04:23:11] HITS file was successfully produced:
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas 154713849 Dec 16 04:21 shared/HITS.pool.root.1
[2025-12-16 04:23:11]  *** Contents of shared directory: ***
[2025-12-16 04:23:11] total 341880
[2025-12-16 04:23:11] -rw-r--r-- 2 boincer umatlas 193649912 Dec 16 03:01 ATLAS.root_0
[2025-12-16 04:23:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 03:01 start_atlas.sh
[2025-12-16 04:23:11] -rw-r--r-- 2 boincer umatlas    592408 Dec 16 03:01 input.tar.gz
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas 154713849 Dec 16 04:21 HITS.pool.root.1
[2025-12-16 04:23:11] -rw------- 1 boincer umatlas   1105920 Dec 16 04:23 result.tar.gz
04:23:12 (4731): run_atlas exited; CPU time 52810.963816
04:23:12 (4731): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN