Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:24:53 (1470923): wrapper (7.7.26015): starting
19:24:53 (1470923): wrapper: running run_atlas (--nthreads 3)
[2025-12-16 19:24:53] Arguments: --nthreads 3
[2025-12-16 19:24:53] Threads: 3
[2025-12-16 19:24:53] Checking for CVMFS
[2025-12-16 19:24:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 19:24:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 19:24:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 19:24:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 19:24:54] 2.9.2.0 256385 4739 84512 154082 2 56 32461639 36864001 0 130560 0 3190524 99.989 171452 20949 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 19:24:54] CVMFS is ok
[2025-12-16 19:24:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 19:24:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 19:24:54] Further information can be found at the LHC@home message board.
[2025-12-16 19:24:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 19:24:54] Checking for apptainer binary...
[2025-12-16 19:24:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 19:24:54] Running /usr/bin/apptainer --version
[2025-12-16 19:24:54] apptainer version 1.4.1-1.1
[2025-12-16 19:24:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 19:24:54] thA305
[2025-12-16 19:24:54] apptainer works
[2025-12-16 19:24:54] Set ATHENA_PROC_NUMBER=3
[2025-12-16 19:24:54] Set ATHENA_CORE_NUMBER=3
[2025-12-16 19:24:54] Starting ATLAS job with PandaID=6929963114
[2025-12-16 19:24:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 21:25:12]  *** The last 200 lines of the pilot log: ***
[2025-12-16 21:25:12] 2025-12-16 20:24:32,643 | INFO     | ***************************************
[2025-12-16 21:25:12] 2025-12-16 20:24:32,643 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 21:25:12] 2025-12-16 20:24:32,643 | INFO     | ***************************************
[2025-12-16 21:25:12] 2025-12-16 20:24:32,643 | INFO     | 
[2025-12-16 21:25:12] 2025-12-16 20:24:32,643 | INFO     | architecture information:
[2025-12-16 21:25:12] 2025-12-16 20:24:32,643 | INFO     | executing command: cat /etc/os-release
[2025-12-16 21:25:12] 2025-12-16 20:24:32,651 | INFO     | cat /etc/os-release:
[2025-12-16 21:25:12] NAME="CentOS Linux"
[2025-12-16 21:25:12] VERSION="7 (Core)"
[2025-12-16 21:25:12] ID="centos"
[2025-12-16 21:25:12] ID_LIKE="rhel fedora"
[2025-12-16 21:25:12] VERSION_ID="7"
[2025-12-16 21:25:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 21:25:12] ANSI_COLOR="0;31"
[2025-12-16 21:25:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 21:25:12] HOME_URL="https://www.centos.org/"
[2025-12-16 21:25:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 21:25:12] 
[2025-12-16 21:25:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 21:25:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 21:25:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 21:25:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 21:25:12] 
[2025-12-16 21:25:12] 2025-12-16 20:24:32,652 | INFO     | ***************************************
[2025-12-16 21:25:12] 2025-12-16 20:24:33,155 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | INFO     | sufficient remaining disk space (227263119360 B)
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | INFO     | update_server=False
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:25:12] 2025-12-16 20:24:33,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 21:25:12] 2025-12-16 20:24:33,441 | INFO     | all payload control threads have been joined
[2025-12-16 21:25:12] 2025-12-16 20:24:34,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:25:12] 2025-12-16 20:24:34,107 | INFO     | aborting loop
[2025-12-16 21:25:12] 2025-12-16 20:24:34,116 | INFO     | all job control threads have been joined
[2025-12-16 21:25:12] 2025-12-16 20:24:34,121 | INFO     | all data control threads have been joined
[2025-12-16 21:25:12] 2025-12-16 20:24:34,174 | INFO     | [job] retrieve thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:34,174 | INFO     | [job] queue monitor thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:34,256 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:34,447 | INFO     | [payload] control thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:34,885 | INFO     | [payload] validate_post thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,113 | INFO     | [job] job monitor thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,120 | INFO     | [data] copytool_in thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,121 | INFO     | [job] control thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,127 | INFO     | [data] control thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,174 | INFO     | [data] copytool_out thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,555 | INFO     | [payload] failed_post thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,565 | INFO     | [job] validate thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,566 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:35,635 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:36,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 21:25:12] 2025-12-16 20:24:40,324 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:44,148 | INFO     | job.realtimelogging is not enabled
[2025-12-16 21:25:12] 2025-12-16 20:24:45,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 21:25:12] 2025-12-16 20:24:58,444 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-12-16 21:25:12] 2025-12-16 20:25:02,822 | INFO     | PID=1474648 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 21:25:12] 2025-12-16 20:25:02,823 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 21:25:12] 2025-12-16 20:25:02,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 21:25:12] 2025-12-16 20:25:02,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 21:25:12] 2025-12-16 20:25:07,118 | INFO     | [monitor] cgroup control has ended
[2025-12-16 21:25:12] 2025-12-16 20:25:07,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908975437632)>', '<ExcThread(monitor, started 139908316374784)>']
[2025-12-16 21:25:12] 2025-12-16 20:25:07,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 21:25:12] 2025-12-16 20:25:07,850 | INFO     | [monitor] control thread has ended
[2025-12-16 21:25:12] 2025-12-16 20:25:12,800 | INFO     | all workflow threads have been joined
[2025-12-16 21:25:12] 2025-12-16 20:25:12,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 21:25:12] 2025-12-16 20:25:12,800 | INFO     | traces error code: 0
[2025-12-16 21:25:12] 2025-12-16 20:25:12,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 21:25:12] 2025-12-16 20:25:12,851 [wrapper] ==== pilot stdout END ====
[2025-12-16 21:25:12] 2025-12-16 20:25:12,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 21:25:12] 2025-12-16 20:25:12,855 [wrapper] pilotpid: 1474648
[2025-12-16 21:25:12] 2025-12-16 20:25:12,858 [wrapper] Pilot exit status: 0
[2025-12-16 21:25:12] 2025-12-16 20:25:12,865 [wrapper] pandaids: 6929963114
[2025-12-16 21:25:12] 2025-12-16 20:25:12,880 [wrapper] cleanup supervisor_pilot 1498023 1474649
[2025-12-16 21:25:12] 2025-12-16 20:25:12,883 [wrapper] Test setup, not cleaning
[2025-12-16 21:25:12] 2025-12-16 20:25:12,885 [wrapper] apfmon messages muted
[2025-12-16 21:25:12] 2025-12-16 20:25:12,887 [wrapper] ==== wrapper stdout END ====
[2025-12-16 21:25:12] 2025-12-16 20:25:12,889 [wrapper] ==== wrapper stderr END ====
[2025-12-16 21:25:12]  *** Error codes and diagnostics ***
[2025-12-16 21:25:12]     "exeErrorCode": 0,
[2025-12-16 21:25:12]     "exeErrorDiag": "",
[2025-12-16 21:25:12]     "pilotErrorCode": 0,
[2025-12-16 21:25:12]     "pilotErrorDiag": "",
[2025-12-16 21:25:12]  *** Listing of results directory ***
[2025-12-16 21:25:12] total 438680
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc    579449 Dec 15 21:57 pilot3.tar.gz
[2025-12-16 21:25:12] -rwx------ 1 boinc boinc     36322 Dec 15 21:58 runpilot2-wrapper.sh
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc      5112 Dec 15 21:59 queuedata.json
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc       100 Dec 16 19:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 21:25:12] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 19:24 run_atlas
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc       105 Dec 16 19:24 job.xml
[2025-12-16 21:25:12] -rw-r--r-- 2 boinc boinc 222285340 Dec 16 19:24 EVNT.47898824._000186.pool.root.1
[2025-12-16 21:25:12] -rw-r--r-- 2 boinc boinc    592390 Dec 16 19:24 input.tar.gz
[2025-12-16 21:25:12] -rw-r--r-- 2 boinc boinc     15847 Dec 16 19:24 start_atlas.sh
[2025-12-16 21:25:12] drwxrwx--x 2 boinc boinc      4096 Dec 16 19:24 shared
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc         0 Dec 16 19:24 boinc_setup_complete
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc      6439 Dec 16 19:24 init_data.xml
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc         0 Dec 16 19:24 boinc_lockfile
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc      2512 Dec 16 19:24 pandaJob.out
[2025-12-16 21:25:12] -rw------- 1 boinc boinc    987409 Dec 16 19:24 agis_schedconf.cvmfs.json
[2025-12-16 21:25:12] -rw------- 1 boinc boinc   1516240 Dec 16 19:24 agis_ddmendpoints.agis.ALL.json
[2025-12-16 21:25:12] drwx------ 5 boinc boinc      4096 Dec 16 19:24 pilot3
[2025-12-16 21:25:12] -rw------- 1 boinc boinc 220416141 Dec 16 21:24 HITS.47898826._003176.pool.root.1
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc       529 Dec 16 21:24 boinc_task_state.xml
[2025-12-16 21:25:12] -rw------- 1 boinc boinc      1032 Dec 16 21:24 memory_monitor_summary.json
[2025-12-16 21:25:12] -rw------- 1 boinc boinc    269448 Dec 16 21:24 log.47898826._003176.job.log.tgz.1
[2025-12-16 21:25:12] -rw------- 1 boinc boinc      7754 Dec 16 21:24 heartbeat.json
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc      8192 Dec 16 21:24 boinc_mmap_file
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc        27 Dec 16 21:24 wrapper_checkpoint.txt
[2025-12-16 21:25:12] -rw------- 1 boinc boinc        95 Dec 16 21:25 pilot_heartbeat.json
[2025-12-16 21:25:12] -rw------- 1 boinc boinc      4824 Dec 16 21:25 pilotlog.txt
[2025-12-16 21:25:12] -rw------- 1 boinc boinc   1032830 Dec 16 21:25 log.47898826._003176.job.log.1
[2025-12-16 21:25:12] -rw------- 1 boinc boinc       357 Dec 16 21:25 output.list
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc       620 Dec 16 21:25 runtime_log
[2025-12-16 21:25:12] -rw------- 1 boinc boinc   1320960 Dec 16 21:25 result.tar.gz
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc      8897 Dec 16 21:25 runtime_log.err
[2025-12-16 21:25:12] -rw------- 1 boinc boinc       659 Dec 16 21:25 NjXNDm3oUp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgjYKDmfej44n.diag
[2025-12-16 21:25:12] -rw-r--r-- 1 boinc boinc      9521 Dec 16 21:25 stderr.txt
[2025-12-16 21:25:12] HITS file was successfully produced:
[2025-12-16 21:25:12] -rw------- 1 boinc boinc 220416141 Dec 16 21:24 shared/HITS.pool.root.1
[2025-12-16 21:25:12]  *** Contents of shared directory: ***
[2025-12-16 21:25:12] total 434224
[2025-12-16 21:25:12] -rw-r--r-- 2 boinc boinc 222285340 Dec 16 19:24 ATLAS.root_0
[2025-12-16 21:25:12] -rw-r--r-- 2 boinc boinc    592390 Dec 16 19:24 input.tar.gz
[2025-12-16 21:25:12] -rw-r--r-- 2 boinc boinc     15847 Dec 16 19:24 start_atlas.sh
[2025-12-16 21:25:12] -rw------- 1 boinc boinc 220416141 Dec 16 21:24 HITS.pool.root.1
[2025-12-16 21:25:12] -rw------- 1 boinc boinc   1320960 Dec 16 21:25 result.tar.gz
21:25:14 (1470923): run_atlas exited; CPU time 20808.327372
21:25:14 (1470923): called boinc_finish(0)

</stderr_txt>
]]>

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