Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:41:27 (22184): wrapper (7.7.26015): starting
01:41:27 (22184): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 01:41:27] Arguments: --nthreads 12
[2025-12-16 01:41:27] Threads: 12
[2025-12-16 01:41:27] Checking for CVMFS
[2025-12-16 01:41:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 01:41:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 01:41:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 01:41:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 01:41:27] 2.11.2.0 2984 316089 93088 154061 3 56 16952275 20275200 1 130560 1 140970661 99.974 17742879 14925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 01:41:27] CVMFS is ok
[2025-12-16 01:41:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 01:41:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 01:41:27] Further information can be found at the LHC@home message board.
[2025-12-16 01:41:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 01:41:27] Checking for apptainer binary...
[2025-12-16 01:41:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 01:41:27] Running /usr/bin/apptainer --version
[2025-12-16 01:41:27] apptainer version 1.3.2-1.el7
[2025-12-16 01:41:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 01:41:29] c-205-26.aglt2.org
[2025-12-16 01:41:29] apptainer works
[2025-12-16 01:41:29] Set ATHENA_PROC_NUMBER=12
[2025-12-16 01:41:29] Set ATHENA_CORE_NUMBER=12
[2025-12-16 01:41:29] Starting ATLAS job with PandaID=6930228628
[2025-12-16 01:41:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:20:00]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:20:00]  mtime=0
[2025-12-16 03:20:00]  protocol_id=None
[2025-12-16 03:20:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 03:20:00]  replicas=None
[2025-12-16 03:20:00]  scope=mc23_13p6TeV
[2025-12-16 03:20:00]  status=None
[2025-12-16 03:20:00]  status_code=0
[2025-12-16 03:20:00]  storage_token=
[2025-12-16 03:20:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6930228628/log.47898782._004412.job.log.tgz.1
[2025-12-16 03:20:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/87/log.47898782._004412.job.log.tgz.1
[2025-12-16 03:20:00]  workdir=None
[2025-12-16 03:20:00] ]
[2025-12-16 03:20:00] 2025-12-16 08:19:19,115 | INFO     | transferring file log.47898782._004412.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6930228628/log.47898782._004412.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 03:20:00] 2025-12-16 08:19:19,115 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6930228628/log.47898782._004412.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898782._004412.job
[2025-12-16 03:20:00] 2025-12-16 08:19:19,137 | INFO     | adding to output.list: log.47898782._004412.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/87/log.47898782._004412.job.log.tg
[2025-12-16 03:20:00] 2025-12-16 08:19:19,138 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 03:20:00] 2025-12-16 08:19:19,138 | INFO     | summary of transferred files:
[2025-12-16 03:20:00] 2025-12-16 08:19:19,139 | INFO     |  -- lfn=log.47898782._004412.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 03:20:00] 2025-12-16 08:19:19,139 | INFO     | stage-out finished correctly
[2025-12-16 03:20:00] 2025-12-16 08:19:19,813 | INFO     | monitor loop #434: job 0:6930228628 is in state 'finished'
[2025-12-16 03:20:00] 2025-12-16 08:19:19,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:20:00] 2025-12-16 08:19:20,261 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 03:20:00] 2025-12-16 08:19:20,793 | INFO     | time since job start (5856s) is within the limit (174528.0s)
[2025-12-16 03:20:00] 2025-12-16 08:19:22,316 | INFO     | monitor loop #435: job 0:6930228628 is in state 'finished'
[2025-12-16 03:20:00] 2025-12-16 08:19:22,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:20:00] 2025-12-16 08:19:22,335 | INFO     | job 6930228628 has state=finished
[2025-12-16 03:20:00] 2025-12-16 08:19:22,335 | INFO     | preparing for final server update for job 6930228628 in state='finished'
[2025-12-16 03:20:00] 2025-12-16 08:19:22,336 | INFO     | this job has now completed (state=finished)
[2025-12-16 03:20:00] 2025-12-16 08:19:22,336 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 03:20:00] 2025-12-16 08:19:22,336 | INFO     | log transfer has been attempted: DONE
[2025-12-16 03:20:00] 2025-12-16 08:19:22,337 | INFO     | job 6930228628 has finished - writing final server update
[2025-12-16 03:20:00] 2025-12-16 08:19:22,337 | INFO     | total number of processed events: 400 (read)
[2025-12-16 03:20:00] 2025-12-16 08:19:22,339 | INFO     | executing command: lscpu
[2025-12-16 03:20:00] 2025-12-16 08:19:22,371 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 03:20:00] 2025-12-16 08:19:22,799 | INFO     | time since job start (5858s) is within the limit (174528.0s)
[2025-12-16 03:20:00] 2025-12-16 08:19:24,805 | INFO     | time since job start (5860s) is within the limit (174528.0s)
[2025-12-16 03:20:00] 2025-12-16 08:19:24,831 | INFO     | monitor loop #436: job 0:6930228628 is in state 'finished'
[2025-12-16 03:20:00] 2025-12-16 08:19:24,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:20:00] 2025-12-16 08:19:26,810 | INFO     | time since job start (5862s) is within the limit (174528.0s)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,130 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 03:20:00] 2025-12-16 08:19:27,134 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-12-16 03:20:00] 2025-12-16 08:19:27,136 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930228628/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,137 | INFO     | extracted standard info from prmon json
[2025-12-16 03:20:00] 2025-12-16 08:19:27,137 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 03:20:00] 2025-12-16 08:19:27,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 03:20:00] 2025-12-16 08:19:27,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 03:20:00] 2025-12-16 08:19:27,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 03:20:00] 2025-12-16 08:19:27,140 | INFO     | fitting pss+swap vs Time
[2025-12-16 03:20:00] 2025-12-16 08:19:27,140 | INFO     | sum of square deviations: 218571540.0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,140 | INFO     | sum of deviations: -13133748838.0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,140 | INFO     | mean x: 1765870322.0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,141 | INFO     | mean y: 2844887.202247191
[2025-12-16 03:20:00] 2025-12-16 08:19:27,141 | INFO     | intersect: 106112255515.98853
[2025-12-16 03:20:00] 2025-12-16 08:19:27,141 | INFO     | chi2: 0.11799890669053396
[2025-12-16 03:20:00] 2025-12-16 08:19:27,141 | INFO     | current memory leak: -60.09 B/s (using 89 data points, chi2=0.12)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,141 | INFO     | could have reported an average CPU frequency of 2134 MHz (7 samples)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,141 | INFO     | ..............................
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . Timing measurements:
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . get job = 0 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . initial setup = 2 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . payload setup = 7 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . stage-in = 0 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . payload execution = 5826 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . stage-out = 0 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | . log creation = 0 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,142 | INFO     | ..............................
[2025-12-16 03:20:00] 2025-12-16 08:19:27,223 | INFO     | 
[2025-12-16 03:20:00] 2025-12-16 08:19:27,223 | INFO     | job summary report
[2025-12-16 03:20:00] 2025-12-16 08:19:27,224 | INFO     | --------------------------------------------------
[2025-12-16 03:20:00] 2025-12-16 08:19:27,224 | INFO     | PanDA job id: 6930228628
[2025-12-16 03:20:00] 2025-12-16 08:19:27,224 | INFO     | task id: 47898782
[2025-12-16 03:20:00] 2025-12-16 08:19:27,224 | INFO     | errors: (none)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 03:20:00] 2025-12-16 08:19:27,224 | INFO     | pilot state: finished 
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | transexitcode: 0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | exeerrorcode: 0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | exeerrordiag: 
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | exitcode: 0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | exitmsg: OK
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | cpuconsumptiontime: 64027 s
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | nevents: 400
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | neventsw: 0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,225 | INFO     | pid: 32303
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | pgrp: 32303
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | corecount: 12
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | event service: False
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | sizes: {0: 2283809, 1: 2284008, 6: 2284270, 11: 2284298, 5837: 2310968, 5839: 2319966, 5840: 2320150, 5847: 2320344}
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | --------------------------------------------------
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | 
[2025-12-16 03:20:00] 2025-12-16 08:19:27,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 03:20:00] 2025-12-16 08:19:27,248 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 03:20:00] 2025-12-16 08:19:27,252 | INFO     | job 6930228628 has completed (purged errors)
[2025-12-16 03:20:00] 2025-12-16 08:19:27,252 | INFO     | overall cleanup function is called
[2025-12-16 03:20:00] 2025-12-16 08:19:28,261 | INFO     | --- collectZombieJob: --- 10, [32303]
[2025-12-16 03:20:00] 2025-12-16 08:19:28,261 | INFO     | zombie collector waiting for pid 32303
[2025-12-16 03:20:00] 2025-12-16 08:19:28,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 03:20:00] 2025-12-16 08:19:28,261 | INFO     | collected zombie processes
[2025-12-16 03:20:00] 2025-12-16 08:19:28,261 | INFO     | will attempt to kill all subprocesses of pid=32303
[2025-12-16 03:20:00] 2025-12-16 08:19:28,351 | INFO     | process IDs to be killed: [32303] (in reverse order)
[2025-12-16 03:20:00] 2025-12-16 08:19:28,404 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 03:20:00] 2025-12-16 08:19:28,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 03:20:00] 2025-12-16 08:19:28,407 | INFO     | did not find any defunct processes belonging to 32303
[2025-12-16 03:20:00] 2025-12-16 08:19:28,409 | INFO     | did not find any defunct processes belonging to 32303
[2025-12-16 03:20:00] 2025-12-16 08:19:28,410 | INFO     | ready for new job
[2025-12-16 03:20:00] 2025-12-16 08:19:28,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 03:20:00] 2025-12-16 08:19:28,411 | INFO     | ***************************************
[2025-12-16 03:20:00] 2025-12-16 08:19:28,411 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 03:20:00] 2025-12-16 08:19:28,411 | INFO     | ***************************************
[2025-12-16 03:20:00] 2025-12-16 08:19:28,411 | INFO     | 
[2025-12-16 03:20:00] 2025-12-16 08:19:28,412 | INFO     | architecture information:
[2025-12-16 03:20:00] 2025-12-16 08:19:28,412 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:20:00] 2025-12-16 08:19:28,427 | INFO     | cat /etc/os-release:
[2025-12-16 03:20:00] NAME="CentOS Linux"
[2025-12-16 03:20:00] VERSION="7 (Core)"
[2025-12-16 03:20:00] ID="centos"
[2025-12-16 03:20:00] ID_LIKE="rhel fedora"
[2025-12-16 03:20:00] VERSION_ID="7"
[2025-12-16 03:20:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:20:00] ANSI_COLOR="0;31"
[2025-12-16 03:20:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:20:00] HOME_URL="https://www.centos.org/"
[2025-12-16 03:20:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:20:00] 
[2025-12-16 03:20:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:20:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:20:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:20:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:20:00] 
[2025-12-16 03:20:00] 2025-12-16 08:19:28,427 | INFO     | ***************************************
[2025-12-16 03:20:00] 2025-12-16 08:19:28,930 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 03:20:00] 2025-12-16 08:19:28,948 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-12-16 03:20:00] 2025-12-16 08:19:28,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:20:00] 2025-12-16 08:19:28,948 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:20:00] 2025-12-16 08:19:28,949 | INFO     | update_server=False
[2025-12-16 03:20:00] 2025-12-16 08:19:28,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:20:00] 2025-12-16 08:19:28,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:20:00] 2025-12-16 08:19:28,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:20:00] 2025-12-16 08:19:28,950 | INFO     | aborting loop
[2025-12-16 03:20:00] 2025-12-16 08:19:29,403 | INFO     | all data control threads have been joined
[2025-12-16 03:20:00] 2025-12-16 08:19:29,604 | INFO     | all job control threads have been joined
[2025-12-16 03:20:00] 2025-12-16 08:19:29,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:20:00] 2025-12-16 08:19:29,954 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:29,955 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:29,955 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,071 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,248 | INFO     | all payload control threads have been joined
[2025-12-16 03:20:00] 2025-12-16 08:19:30,279 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,408 | INFO     | [data] control thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,571 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,610 | INFO     | [job] control thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:20:00] 2025-12-16 08:19:30,851 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,943 | INFO     | [job] validate thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:30,977 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:31,147 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:31,253 | INFO     | [payload] control thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:31,288 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:31,737 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:34,855 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:20:00] 2025-12-16 08:19:52,892 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:20:00] 2025-12-16 08:19:54,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049146165056)>', '<ExcThread(monitor, started 140048716510976)>']
[2025-12-16 03:20:00] 2025-12-16 08:19:59,342 | INFO     | all workflow threads have been joined
[2025-12-16 03:20:00] 2025-12-16 08:19:59,342 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:20:00] 2025-12-16 08:19:59,343 | INFO     | traces error code: 0
[2025-12-16 03:20:00] 2025-12-16 08:19:59,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:20:00] 2025-12-16 08:20:00,011 | INFO     | PID=25882 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 03:20:00] 2025-12-16 08:20:00,011 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:20:00] 2025-12-16 08:20:00,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:20:00] 2025-12-16 08:20:00,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:20:00] 2025-12-16 08:20:00,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:20:00] 2025-12-16 08:20:00,012 | INFO     | [monitor] control thread has ended
[2025-12-16 03:20:00] 2025-12-16 08:20:00,097 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:20:00] 2025-12-16 08:20:00,101 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:20:00] 2025-12-16 08:20:00,105 [wrapper] pilotpid: 25882
[2025-12-16 03:20:00] 2025-12-16 08:20:00,109 [wrapper] Pilot exit status: 0
[2025-12-16 03:20:00] 2025-12-16 08:20:00,124 [wrapper] pandaids: 6930228628
[2025-12-16 03:20:00] 2025-12-16 08:20:00,164 [wrapper] cleanup supervisor_pilot 32367 25883
[2025-12-16 03:20:00] 2025-12-16 08:20:00,168 [wrapper] Test setup, not cleaning
[2025-12-16 03:20:00] 2025-12-16 08:20:00,172 [wrapper] apfmon messages muted
[2025-12-16 03:20:00] 2025-12-16 08:20:00,175 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:20:00] 2025-12-16 08:20:00,179 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:20:00]  *** Error codes and diagnostics ***
[2025-12-16 03:20:00]     "exeErrorCode": 0,
[2025-12-16 03:20:00]     "exeErrorDiag": "",
[2025-12-16 03:20:00]     "pilotErrorCode": 0,
[2025-12-16 03:20:00]     "pilotErrorDiag": "",
[2025-12-16 03:20:00]  *** Listing of results directory ***
[2025-12-16 03:20:00] total 411236
[2025-12-16 03:20:00] -rwx------ 1 boincer umatlas     36322 Dec 15 21:09 runpilot2-wrapper.sh
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 21:12 pilot3.tar.gz
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 21:12 queuedata.json
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas       100 Dec 16 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:20:00] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 01:41 run_atlas
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas       105 Dec 16 01:41 job.xml
[2025-12-16 03:20:00] -rw-r--r-- 2 boincer umatlas 212947315 Dec 16 01:41 EVNT.47898779._000180.pool.root.1
[2025-12-16 03:20:00] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 01:41 start_atlas.sh
[2025-12-16 03:20:00] drwxrwx--x 2 boincer umatlas      4096 Dec 16 01:41 shared
[2025-12-16 03:20:00] -rw-r--r-- 2 boincer umatlas    592398 Dec 16 01:41 input.tar.gz
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas         0 Dec 16 01:41 boinc_lockfile
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas      2522 Dec 16 01:41 pandaJob.out
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas        57 Dec 16 01:41 setup.sh.local
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas    994531 Dec 16 01:41 agis_schedconf.cvmfs.json
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas   1516240 Dec 16 01:41 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:20:00] drwx------ 5 boincer umatlas      4096 Dec 16 01:41 pilot3
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 03:10 init_data.xml
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas 201752736 Dec 16 03:18 HITS.47898782._004412.pool.root.1
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas        95 Dec 16 03:19 pilot_heartbeat.json
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas       529 Dec 16 03:19 boinc_task_state.xml
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas      1046 Dec 16 03:19 memory_monitor_summary.json
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas    409640 Dec 16 03:19 log.47898782._004412.job.log.tgz.1
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas      7850 Dec 16 03:19 heartbeat.json
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 03:19 boinc_mmap_file
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas        27 Dec 16 03:19 wrapper_checkpoint.txt
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas       745 Dec 16 03:20 pilotlog.txt
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas    834191 Dec 16 03:20 log.47898782._004412.job.log.1
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas       357 Dec 16 03:20 output.list
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas       620 Dec 16 03:20 runtime_log
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas   1259520 Dec 16 03:20 result.tar.gz
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas       659 Dec 16 03:20 WOuKDmVgZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcEZKDmbkUjPm.diag
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 03:20 runtime_log.err
[2025-12-16 03:20:00] -rw-r--r-- 1 boincer umatlas     21774 Dec 16 03:20 stderr.txt
[2025-12-16 03:20:00] HITS file was successfully produced:
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas 201752736 Dec 16 03:18 shared/HITS.pool.root.1
[2025-12-16 03:20:00]  *** Contents of shared directory: ***
[2025-12-16 03:20:00] total 406820
[2025-12-16 03:20:00] -rw-r--r-- 2 boincer umatlas 212947315 Dec 16 01:41 ATLAS.root_0
[2025-12-16 03:20:00] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 01:41 start_atlas.sh
[2025-12-16 03:20:00] -rw-r--r-- 2 boincer umatlas    592398 Dec 16 01:41 input.tar.gz
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas 201752736 Dec 16 03:18 HITS.pool.root.1
[2025-12-16 03:20:00] -rw------- 1 boincer umatlas   1259520 Dec 16 03:20 result.tar.gz
03:20:02 (22184): run_atlas exited; CPU time 64000.825238
03:20:02 (22184): called boinc_finish(0)

</stderr_txt>
]]>

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