Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:20:45 (21525): wrapper (7.7.26015): starting
01:20:45 (21525): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 01:20:45] Arguments: --nthreads 12
[2025-12-16 01:20:45] Threads: 12
[2025-12-16 01:20:45] Checking for CVMFS
[2025-12-16 01:20:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 01:20:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 01:20:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 01:20:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 01:20:46] 2.11.2.0 25590 216795 94452 154061 1 56 13263708 20275200 1 130560 2 110772207 99.963 9099072 27792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 01:20:46] CVMFS is ok
[2025-12-16 01:20:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 01:20:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 01:20:46] Further information can be found at the LHC@home message board.
[2025-12-16 01:20:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 01:20:46] Checking for apptainer binary...
[2025-12-16 01:20:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 01:20:46] Running /usr/bin/apptainer --version
[2025-12-16 01:20:46] apptainer version 1.3.2-1.el7
[2025-12-16 01:20:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 01:20:47] c-205-24.aglt2.org
[2025-12-16 01:20:47] apptainer works
[2025-12-16 01:20:47] Set ATHENA_PROC_NUMBER=12
[2025-12-16 01:20:47] Set ATHENA_CORE_NUMBER=12
[2025-12-16 01:20:47] Starting ATLAS job with PandaID=6930650217
[2025-12-16 01:20:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:01:18]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:01:18]  workdir=None
[2025-12-16 03:01:18] ]
[2025-12-16 03:01:18] 2025-12-16 08:00:15,689 | INFO     | transferring file log.47898836._003407.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6930650217/log.47898836._003407.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 03:01:18] 2025-12-16 08:00:15,689 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6930650217/log.47898836._003407.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898836._003407.job
[2025-12-16 03:01:18] 2025-12-16 08:00:15,712 | INFO     | adding to output.list: log.47898836._003407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/0f/log.47898836._003407.job.log.tg
[2025-12-16 03:01:18] 2025-12-16 08:00:15,713 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 03:01:18] 2025-12-16 08:00:15,714 | INFO     | summary of transferred files:
[2025-12-16 03:01:18] 2025-12-16 08:00:15,714 | INFO     |  -- lfn=log.47898836._003407.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 03:01:18] 2025-12-16 08:00:15,714 | INFO     | stage-out finished correctly
[2025-12-16 03:01:18] 2025-12-16 08:00:16,022 | INFO     | time since job start (5954s) is within the limit (174528.0s)
[2025-12-16 03:01:18] 2025-12-16 08:00:16,622 | INFO     | monitor loop #440: job 0:6930650217 is in state 'finished'
[2025-12-16 03:01:18] 2025-12-16 08:00:16,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:01:18] 2025-12-16 08:00:17,139 | INFO     | PID=25204 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 03:01:18] 2025-12-16 08:00:18,049 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 03:01:18] 2025-12-16 08:00:18,139 | INFO     | time since job start (5956s) is within the limit (174528.0s)
[2025-12-16 03:01:18] 2025-12-16 08:00:19,125 | INFO     | monitor loop #441: job 0:6930650217 is in state 'finished'
[2025-12-16 03:01:18] 2025-12-16 08:00:19,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:01:18] 2025-12-16 08:00:20,145 | INFO     | time since job start (5958s) is within the limit (174528.0s)
[2025-12-16 03:01:18] 2025-12-16 08:00:21,066 | INFO     | job 6930650217 has state=finished
[2025-12-16 03:01:18] 2025-12-16 08:00:21,066 | INFO     | preparing for final server update for job 6930650217 in state='finished'
[2025-12-16 03:01:18] 2025-12-16 08:00:21,066 | INFO     | this job has now completed (state=finished)
[2025-12-16 03:01:18] 2025-12-16 08:00:21,067 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 03:01:18] 2025-12-16 08:00:21,067 | INFO     | log transfer has been attempted: DONE
[2025-12-16 03:01:18] 2025-12-16 08:00:21,067 | INFO     | job 6930650217 has finished - writing final server update
[2025-12-16 03:01:18] 2025-12-16 08:00:21,067 | INFO     | total number of processed events: 400 (read)
[2025-12-16 03:01:18] 2025-12-16 08:00:21,068 | INFO     | executing command: lscpu
[2025-12-16 03:01:18] 2025-12-16 08:00:21,094 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 03:01:18] 2025-12-16 08:00:21,628 | INFO     | monitor loop #442: job 0:6930650217 is in state 'finished'
[2025-12-16 03:01:18] 2025-12-16 08:00:21,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:01:18] 2025-12-16 08:00:22,151 | INFO     | time since job start (5960s) is within the limit (174528.0s)
[2025-12-16 03:01:18] 2025-12-16 08:00:24,131 | INFO     | monitor loop #443: job 0:6930650217 is in state 'finished'
[2025-12-16 03:01:18] 2025-12-16 08:00:24,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:01:18] 2025-12-16 08:00:24,157 | INFO     | time since job start (5962s) is within the limit (174528.0s)
[2025-12-16 03:01:18] 2025-12-16 08:00:24,157 | INFO     | 5964s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-16 03:01:18] 2025-12-16 08:00:26,163 | INFO     | time since job start (5964s) is within the limit (174528.0s)
[2025-12-16 03:01:18] 2025-12-16 08:00:26,634 | INFO     | monitor loop #444: job 0:6930650217 is in state 'finished'
[2025-12-16 03:01:18] 2025-12-16 08:00:26,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 03:01:18] 2025-12-16 08:00:26,979 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 03:01:18] 2025-12-16 08:00:26,983 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-16 03:01:18] 2025-12-16 08:00:26,986 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930650217/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 03:01:18] 2025-12-16 08:00:26,987 | INFO     | extracted standard info from prmon json
[2025-12-16 03:01:18] 2025-12-16 08:00:26,987 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 03:01:18] 2025-12-16 08:00:26,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 03:01:18] 2025-12-16 08:00:26,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 03:01:18] 2025-12-16 08:00:26,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 03:01:18] 2025-12-16 08:00:26,990 | INFO     | fitting pss+swap vs Time
[2025-12-16 03:01:18] 2025-12-16 08:00:26,990 | INFO     | sum of square deviations: 233641590.0
[2025-12-16 03:01:18] 2025-12-16 08:00:26,990 | INFO     | sum of deviations: -7013032628.0
[2025-12-16 03:01:18] 2025-12-16 08:00:26,991 | INFO     | mean x: 1765869141.0
[2025-12-16 03:01:18] 2025-12-16 08:00:26,991 | INFO     | mean y: 2910378.4835164836
[2025-12-16 03:01:18] 2025-12-16 08:00:26,991 | INFO     | intersect: 53007591191.56706
[2025-12-16 03:01:18] 2025-12-16 08:00:26,991 | INFO     | chi2: 0.13450968558312149
[2025-12-16 03:01:18] 2025-12-16 08:00:26,991 | INFO     | current memory leak: -30.02 B/s (using 91 data points, chi2=0.13)
[2025-12-16 03:01:18] 2025-12-16 08:00:26,991 | INFO     | could have reported an average CPU frequency of 2111 MHz (7 samples)
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | ..............................
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . Timing measurements:
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . get job = 0 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . initial setup = 2 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . payload setup = 7 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . stage-in = 0 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . payload execution = 5924 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,992 | INFO     | . stage-out = 0 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,993 | INFO     | . log creation = 0 s
[2025-12-16 03:01:18] 2025-12-16 08:00:26,993 | INFO     | ..............................
[2025-12-16 03:01:18] 2025-12-16 08:00:27,075 | INFO     | 
[2025-12-16 03:01:18] 2025-12-16 08:00:27,075 | INFO     | job summary report
[2025-12-16 03:01:18] 2025-12-16 08:00:27,075 | INFO     | --------------------------------------------------
[2025-12-16 03:01:18] 2025-12-16 08:00:27,075 | INFO     | PanDA job id: 6930650217
[2025-12-16 03:01:18] 2025-12-16 08:00:27,075 | INFO     | task id: 47898836
[2025-12-16 03:01:18] 2025-12-16 08:00:27,076 | INFO     | errors: (none)
[2025-12-16 03:01:18] 2025-12-16 08:00:27,076 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 03:01:18] 2025-12-16 08:00:27,076 | INFO     | pilot state: finished 
[2025-12-16 03:01:18] 2025-12-16 08:00:27,076 | INFO     | transexitcode: 0
[2025-12-16 03:01:18] 2025-12-16 08:00:27,076 | INFO     | exeerrorcode: 0
[2025-12-16 03:01:18] 2025-12-16 08:00:27,076 | INFO     | exeerrordiag: 
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | exitcode: 0
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | exitmsg: OK
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | cpuconsumptiontime: 64475 s
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | nevents: 400
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | neventsw: 0
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | pid: 31623
[2025-12-16 03:01:18] 2025-12-16 08:00:27,077 | INFO     | pgrp: 31623
[2025-12-16 03:01:18] 2025-12-16 08:00:27,078 | INFO     | corecount: 12
[2025-12-16 03:01:18] 2025-12-16 08:00:27,078 | INFO     | event service: False
[2025-12-16 03:01:18] 2025-12-16 08:00:27,078 | INFO     | sizes: {0: 2284010, 5: 2284272, 11: 2284328, 5935: 2311026, 5937: 2320024, 5939: 2320080, 5948: 2320402}
[2025-12-16 03:01:18] 2025-12-16 08:00:27,078 | INFO     | --------------------------------------------------
[2025-12-16 03:01:18] 2025-12-16 08:00:27,078 | INFO     | 
[2025-12-16 03:01:18] 2025-12-16 08:00:27,078 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 03:01:18] 2025-12-16 08:00:27,101 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,102 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,102 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,102 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,104 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 03:01:18] 2025-12-16 08:00:27,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,105 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 03:01:18] 2025-12-16 08:00:27,105 | INFO     | job 6930650217 has completed (purged errors)
[2025-12-16 03:01:18] 2025-12-16 08:00:27,105 | INFO     | overall cleanup function is called
[2025-12-16 03:01:18] 2025-12-16 08:00:28,113 | INFO     | --- collectZombieJob: --- 10, [31623]
[2025-12-16 03:01:18] 2025-12-16 08:00:28,113 | INFO     | zombie collector waiting for pid 31623
[2025-12-16 03:01:18] 2025-12-16 08:00:28,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 03:01:18] 2025-12-16 08:00:28,113 | INFO     | collected zombie processes
[2025-12-16 03:01:18] 2025-12-16 08:00:28,113 | INFO     | will attempt to kill all subprocesses of pid=31623
[2025-12-16 03:01:18] 2025-12-16 08:00:28,209 | INFO     | process IDs to be killed: [31623] (in reverse order)
[2025-12-16 03:01:18] 2025-12-16 08:00:28,264 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 03:01:18] 2025-12-16 08:00:28,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 03:01:18] 2025-12-16 08:00:28,268 | INFO     | did not find any defunct processes belonging to 31623
[2025-12-16 03:01:18] 2025-12-16 08:00:28,271 | INFO     | did not find any defunct processes belonging to 31623
[2025-12-16 03:01:18] 2025-12-16 08:00:28,271 | INFO     | ready for new job
[2025-12-16 03:01:18] 2025-12-16 08:00:28,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 03:01:18] 2025-12-16 08:00:28,272 | INFO     | ***************************************
[2025-12-16 03:01:18] 2025-12-16 08:00:28,273 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 03:01:18] 2025-12-16 08:00:28,273 | INFO     | ***************************************
[2025-12-16 03:01:18] 2025-12-16 08:00:28,273 | INFO     | 
[2025-12-16 03:01:18] 2025-12-16 08:00:28,273 | INFO     | architecture information:
[2025-12-16 03:01:18] 2025-12-16 08:00:28,274 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:01:18] 2025-12-16 08:00:28,288 | INFO     | cat /etc/os-release:
[2025-12-16 03:01:18] NAME="CentOS Linux"
[2025-12-16 03:01:18] VERSION="7 (Core)"
[2025-12-16 03:01:18] ID="centos"
[2025-12-16 03:01:18] ID_LIKE="rhel fedora"
[2025-12-16 03:01:18] VERSION_ID="7"
[2025-12-16 03:01:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:01:18] ANSI_COLOR="0;31"
[2025-12-16 03:01:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:01:18] HOME_URL="https://www.centos.org/"
[2025-12-16 03:01:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:01:18] 
[2025-12-16 03:01:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:01:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:01:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:01:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:01:18] 
[2025-12-16 03:01:18] 2025-12-16 08:00:28,288 | INFO     | ***************************************
[2025-12-16 03:01:18] 2025-12-16 08:00:28,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 03:01:18] 2025-12-16 08:00:28,807 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-12-16 03:01:18] 2025-12-16 08:00:28,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:01:18] 2025-12-16 08:00:28,808 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:01:18] 2025-12-16 08:00:28,808 | INFO     | update_server=False
[2025-12-16 03:01:18] 2025-12-16 08:00:28,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:01:18] 2025-12-16 08:00:28,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:01:18] 2025-12-16 08:00:28,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:01:18] 2025-12-16 08:00:28,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:01:18] 2025-12-16 08:00:28,830 | INFO     | all payload control threads have been joined
[2025-12-16 03:01:18] 2025-12-16 08:00:29,137 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 03:01:18] 2025-12-16 08:00:29,137 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 03:01:18] 2025-12-16 08:00:29,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:01:18] 2025-12-16 08:00:29,138 | INFO     | will abort loop
[2025-12-16 03:01:18] 2025-12-16 08:00:29,686 | INFO     | all job control threads have been joined
[2025-12-16 03:01:18] 2025-12-16 08:00:29,723 | INFO     | all data control threads have been joined
[2025-12-16 03:01:18] 2025-12-16 08:00:29,814 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:29,814 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:29,835 | INFO     | [payload] control thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:29,887 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:29,896 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,142 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,448 | INFO     | [job] validate thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,691 | INFO     | [job] control thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,728 | INFO     | [data] control thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,744 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,819 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,904 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,978 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:30,993 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:31,101 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:32,815 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:01:18] 2025-12-16 08:00:59,368 | INFO     | PID=25204 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 03:01:18] 2025-12-16 08:00:59,368 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:01:18] 2025-12-16 08:00:59,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:01:18] 2025-12-16 08:00:59,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:01:18] 2025-12-16 08:01:11,656 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:01:18] 2025-12-16 08:01:13,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047604774720)>', '<ExcThread(monitor, started 140047290439424)>']
[2025-12-16 03:01:18] 2025-12-16 08:01:13,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:01:18] 2025-12-16 08:01:13,436 | INFO     | [monitor] control thread has ended
[2025-12-16 03:01:18] 2025-12-16 08:01:18,127 | INFO     | all workflow threads have been joined
[2025-12-16 03:01:18] 2025-12-16 08:01:18,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:01:18] 2025-12-16 08:01:18,131 | INFO     | traces error code: 0
[2025-12-16 03:01:18] 2025-12-16 08:01:18,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:01:18] 2025-12-16 08:01:18,233 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:01:18] 2025-12-16 08:01:18,237 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:01:18] 2025-12-16 08:01:18,241 [wrapper] pilotpid: 25204
[2025-12-16 03:01:18] 2025-12-16 08:01:18,245 [wrapper] Pilot exit status: 0
[2025-12-16 03:01:18] 2025-12-16 08:01:18,262 [wrapper] pandaids: 6930650217
[2025-12-16 03:01:18] 2025-12-16 08:01:18,309 [wrapper] cleanup supervisor_pilot 31069 25205
[2025-12-16 03:01:18] 2025-12-16 08:01:18,313 [wrapper] Test setup, not cleaning
[2025-12-16 03:01:18] 2025-12-16 08:01:18,317 [wrapper] apfmon messages muted
[2025-12-16 03:01:18] 2025-12-16 08:01:18,321 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:01:18] 2025-12-16 08:01:18,325 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:01:18]  *** Error codes and diagnostics ***
[2025-12-16 03:01:18]     "exeErrorCode": 0,
[2025-12-16 03:01:18]     "exeErrorDiag": "",
[2025-12-16 03:01:18]     "pilotErrorCode": 0,
[2025-12-16 03:01:18]     "pilotErrorDiag": "",
[2025-12-16 03:01:18]  *** Listing of results directory ***
[2025-12-16 03:01:18] total 408768
[2025-12-16 03:01:18] -rwx------ 1 boincer umatlas     36322 Dec 15 21:07 runpilot2-wrapper.sh
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 21:09 queuedata.json
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 21:09 pilot3.tar.gz
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas       100 Dec 16 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:01:18] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 01:20 run_atlas
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas       105 Dec 16 01:20 job.xml
[2025-12-16 03:01:18] -rw-r--r-- 2 boincer umatlas 211510790 Dec 16 01:20 EVNT.47898833._000134.pool.root.1
[2025-12-16 03:01:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 01:20 start_atlas.sh
[2025-12-16 03:01:18] drwxrwx--x 2 boincer umatlas      4096 Dec 16 01:20 shared
[2025-12-16 03:01:18] -rw-r--r-- 2 boincer umatlas    592407 Dec 16 01:20 input.tar.gz
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas         0 Dec 16 01:20 boinc_lockfile
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas      2552 Dec 16 01:20 pandaJob.out
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas        57 Dec 16 01:20 setup.sh.local
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas    994531 Dec 16 01:21 agis_schedconf.cvmfs.json
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas   1516240 Dec 16 01:21 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:01:18] drwx------ 5 boincer umatlas      4096 Dec 16 01:21 pilot3
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 02:55 init_data.xml
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas 200654218 Dec 16 02:59 HITS.47898836._003407.pool.root.1
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas       529 Dec 16 03:00 boinc_task_state.xml
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas      1048 Dec 16 03:00 memory_monitor_summary.json
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas    401367 Dec 16 03:00 log.47898836._003407.job.log.tgz.1
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas        95 Dec 16 03:00 pilot_heartbeat.json
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas      7843 Dec 16 03:00 heartbeat.json
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas        27 Dec 16 03:01 wrapper_checkpoint.txt
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 03:01 boinc_mmap_file
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas      4932 Dec 16 03:01 pilotlog.txt
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas    847801 Dec 16 03:01 log.47898836._003407.job.log.1
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas       357 Dec 16 03:01 output.list
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas       620 Dec 16 03:01 runtime_log
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas   1269760 Dec 16 03:01 result.tar.gz
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 03:01 runtime_log.err
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas       659 Dec 16 03:01 odTNDmUeZp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfkUKDmajYjsn.diag
[2025-12-16 03:01:18] -rw-r--r-- 1 boincer umatlas     22437 Dec 16 03:01 stderr.txt
[2025-12-16 03:01:18] HITS file was successfully produced:
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas 200654218 Dec 16 02:59 shared/HITS.pool.root.1
[2025-12-16 03:01:18]  *** Contents of shared directory: ***
[2025-12-16 03:01:18] total 404348
[2025-12-16 03:01:18] -rw-r--r-- 2 boincer umatlas 211510790 Dec 16 01:20 ATLAS.root_0
[2025-12-16 03:01:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 01:20 start_atlas.sh
[2025-12-16 03:01:18] -rw-r--r-- 2 boincer umatlas    592407 Dec 16 01:20 input.tar.gz
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas 200654218 Dec 16 02:59 HITS.pool.root.1
[2025-12-16 03:01:18] -rw------- 1 boincer umatlas   1269760 Dec 16 03:01 result.tar.gz
03:01:19 (21525): run_atlas exited; CPU time 64455.934334
03:01:19 (21525): called boinc_finish(0)

</stderr_txt>
]]>

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