Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:36 (42269): wrapper (7.7.26015): starting
00:11:36 (42269): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 00:11:36] Arguments: --nthreads 12
[2025-12-16 00:11:36] Threads: 12
[2025-12-16 00:11:36] Checking for CVMFS
[2025-12-16 00:11:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:11:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:11:37] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:11:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:11:38] 2.13.3.0 13031 58411 391180 154059 2 22 22120542 32935936 26210 16776704 0 297898613 99.506 379386016 34527 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:11:38] CVMFS is ok
[2025-12-16 00:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:11:38] Further information can be found at the LHC@home message board.
[2025-12-16 00:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:11:38] Checking for apptainer binary...
[2025-12-16 00:11:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:11:38] Running /usr/bin/apptainer --version
[2025-12-16 00:11:38] apptainer version 1.4.5-2.el9
[2025-12-16 00:11:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:11:39] c6-2-11-4.aglt2.org
[2025-12-16 00:11:39] apptainer works
[2025-12-16 00:11:39] Set ATHENA_PROC_NUMBER=12
[2025-12-16 00:11:39] Set ATHENA_CORE_NUMBER=12
[2025-12-16 00:11:39] Starting ATLAS job with PandaID=6929808187
[2025-12-16 00:11:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 03:04:08]  *** The last 200 lines of the pilot log: ***
[2025-12-16 03:04:08] 2025-12-16 08:03:34,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 03:04:08] 2025-12-16 08:03:34,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 03:04:08] 2025-12-16 08:03:34,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 03:04:08] 2025-12-16 08:03:34,039 | INFO     | fitting pss+swap vs Time
[2025-12-16 03:04:08] 2025-12-16 08:03:34,039 | INFO     | sum of square deviations: 1418298381.7349446
[2025-12-16 03:04:08] 2025-12-16 08:03:34,040 | INFO     | sum of deviations: 49356391467.506065
[2025-12-16 03:04:08] 2025-12-16 08:03:34,040 | INFO     | mean x: 1765867086.3493977
[2025-12-16 03:04:08] 2025-12-16 08:03:34,040 | INFO     | mean y: 2602955.060240964
[2025-12-16 03:04:08] 2025-12-16 08:03:34,041 | INFO     | intersect: -61449083316.22347
[2025-12-16 03:04:08] 2025-12-16 08:03:34,041 | INFO     | chi2: 2.642060875829711
[2025-12-16 03:04:08] 2025-12-16 08:03:34,041 | INFO     | sum of square deviations: 1293934351.8012483
[2025-12-16 03:04:08] 2025-12-16 08:03:34,047 | INFO     | sum of deviations: 47957689471.42859
[2025-12-16 03:04:08] 2025-12-16 08:03:34,047 | INFO     | mean x: 1765866933.8385093
[2025-12-16 03:04:08] 2025-12-16 08:03:34,047 | INFO     | mean y: 2601239.285714286
[2025-12-16 03:04:08] 2025-12-16 08:03:34,047 | INFO     | intersect: -65446544571.70602
[2025-12-16 03:04:08] 2025-12-16 08:03:34,048 | INFO     | chi2: 2.6420146040263686
[2025-12-16 03:04:08] 2025-12-16 08:03:34,048 | INFO     | current chi2=2.6420146040263686 (change=0.0017513526567678745 %)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,048 | INFO     | right removable region: 160
[2025-12-16 03:04:08] 2025-12-16 08:03:34,048 | INFO     | sum of square deviations: 1293908855.5155282
[2025-12-16 03:04:08] 2025-12-16 08:03:34,049 | INFO     | sum of deviations: 9370653810.788818
[2025-12-16 03:04:08] 2025-12-16 08:03:34,049 | INFO     | mean x: 1765867238.8757763
[2025-12-16 03:04:08] 2025-12-16 08:03:34,049 | INFO     | mean y: 2651699.6894409936
[2025-12-16 03:04:08] 2025-12-16 08:03:34,049 | INFO     | intersect: -12785985228.470015
[2025-12-16 03:04:08] 2025-12-16 08:03:34,050 | INFO     | chi2: 0.4441514954427172
[2025-12-16 03:04:08] 2025-12-16 08:03:34,050 | INFO     | current chi2=0.4441514954427172 (change=83.189202811111 %)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,050 | INFO     | sum of square deviations: 1177007841.5576892
[2025-12-16 03:04:08] 2025-12-16 08:03:34,051 | INFO     | sum of deviations: -5513337813.000004
[2025-12-16 03:04:08] 2025-12-16 08:03:34,051 | INFO     | mean x: 1765867391.4038463
[2025-12-16 03:04:08] 2025-12-16 08:03:34,051 | INFO     | mean y: 2671028.3333333335
[2025-12-16 03:04:08] 2025-12-16 08:03:34,051 | INFO     | intersect: 8274343584.80994
[2025-12-16 03:04:08] 2025-12-16 08:03:34,052 | INFO     | chi2: 0.1461837145505486
[2025-12-16 03:04:08] 2025-12-16 08:03:34,052 | INFO     | current chi2=0.1461837145505486 (change=67.08697008779922 %)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,052 | INFO     | sum of square deviations: 1067381933.046357
[2025-12-16 03:04:08] 2025-12-16 08:03:34,053 | INFO     | sum of deviations: -13549462055.582779
[2025-12-16 03:04:08] 2025-12-16 08:03:34,053 | INFO     | mean x: 1765867543.9205298
[2025-12-16 03:04:08] 2025-12-16 08:03:34,053 | INFO     | mean y: 2682142.284768212
[2025-12-16 03:04:08] 2025-12-16 08:03:34,053 | INFO     | intersect: 22418796319.193203
[2025-12-16 03:04:08] 2025-12-16 08:03:34,053 | INFO     | chi2: 0.026891710348729655
[2025-12-16 03:04:08] 2025-12-16 08:03:34,053 | INFO     | current chi2=0.026891710348729655 (change=81.60416813089613 %)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,054 | INFO     | sum of square deviations: 964779045.9452049
[2025-12-16 03:04:08] 2025-12-16 08:03:34,054 | INFO     | sum of deviations: -13168207994.520557
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | mean x: 1765867696.4383562
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | mean y: 2681568.164383562
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | intersect: 24104897733.86026
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | chi2: 0.025574680605939884
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | current chi2=0.025574680605939884 (change=4.897530598502772 %)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | left removable region: 40
[2025-12-16 03:04:08] 2025-12-16 08:03:34,055 | INFO     | sum of square deviations: 535592689.16666526
[2025-12-16 03:04:08] 2025-12-16 08:03:34,056 | INFO     | sum of deviations: -7306762464.750002
[2025-12-16 03:04:08] 2025-12-16 08:03:34,056 | INFO     | mean x: 1765868123.4166667
[2025-12-16 03:04:08] 2025-12-16 08:03:34,056 | INFO     | mean y: 2672237.475
[2025-12-16 03:04:08] 2025-12-16 08:03:34,056 | INFO     | intersect: 24093327660.63808
[2025-12-16 03:04:08] 2025-12-16 08:03:34,057 | INFO     | chi2: 0.02350851096899544
[2025-12-16 03:04:08] 2025-12-16 08:03:34,057 | INFO     | current memory leak: -13.64 B/s (using 120 data points, chi2=0.02)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,057 | INFO     | could have reported an average CPU frequency of 2617 MHz (9 samples)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,057 | INFO     | ..............................
[2025-12-16 03:04:08] 2025-12-16 08:03:34,057 | INFO     | . Timing measurements:
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . get job = 0 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . initial setup = 4 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . payload setup = 28 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . stage-in = 0 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . payload execution = 10143 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . stage-out = 2 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | . log creation = 1 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,058 | INFO     | ..............................
[2025-12-16 03:04:08] 2025-12-16 08:03:34,601 | INFO     | 
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | job summary report
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | --------------------------------------------------
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | PanDA job id: 6929808187
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | task id: 47886831
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | errors: (none)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | pilot state: finished 
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | transexitcode: 0
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | exeerrorcode: 0
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | exeerrordiag: 
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | exitcode: 0
[2025-12-16 03:04:08] 2025-12-16 08:03:34,602 | INFO     | exitmsg: OK
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | cpuconsumptiontime: 47700 s
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | nevents: 400
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | neventsw: 0
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | pid: 55560
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | pgrp: 55560
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | corecount: 12
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | event service: False
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | sizes: {0: 2283762, 1: 2283846, 2: 2284017, 3: 2284073, 14: 2284073, 25: 2284101, 26: 2284519, 36: 2284547, 10177: 2312991, 10178: 2312990, 10181: 2322044, 10185: 
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | --------------------------------------------------
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | 
[2025-12-16 03:04:08] 2025-12-16 08:03:34,603 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-16 03:04:08] 2025-12-16 08:03:34,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 03:04:08] 2025-12-16 08:03:34,664 | INFO     | job 6929808187 has completed (purged errors)
[2025-12-16 03:04:08] 2025-12-16 08:03:34,664 | INFO     | overall cleanup function is called
[2025-12-16 03:04:08] 2025-12-16 08:03:35,678 | INFO     | --- collectZombieJob: --- 10, [55560]
[2025-12-16 03:04:08] 2025-12-16 08:03:35,678 | INFO     | zombie collector waiting for pid 55560
[2025-12-16 03:04:08] 2025-12-16 08:03:35,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 03:04:08] 2025-12-16 08:03:35,678 | INFO     | collected zombie processes
[2025-12-16 03:04:08] 2025-12-16 08:03:35,678 | INFO     | will attempt to kill all subprocesses of pid=55560
[2025-12-16 03:04:08] 2025-12-16 08:03:37,011 | INFO     | process IDs to be killed: [55560] (in reverse order)
[2025-12-16 03:04:08] 2025-12-16 08:03:37,215 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 03:04:08] 2025-12-16 08:03:37,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 03:04:08] 2025-12-16 08:03:37,265 | INFO     | did not find any defunct processes belonging to 55560
[2025-12-16 03:04:08] 2025-12-16 08:03:37,283 | INFO     | did not find any defunct processes belonging to 55560
[2025-12-16 03:04:08] 2025-12-16 08:03:37,284 | INFO     | ready for new job
[2025-12-16 03:04:08] 2025-12-16 08:03:37,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 03:04:08] 2025-12-16 08:03:37,286 | INFO     | ***************************************
[2025-12-16 03:04:08] 2025-12-16 08:03:37,286 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 03:04:08] 2025-12-16 08:03:37,286 | INFO     | ***************************************
[2025-12-16 03:04:08] 2025-12-16 08:03:37,286 | INFO     | 
[2025-12-16 03:04:08] 2025-12-16 08:03:37,292 | INFO     | architecture information:
[2025-12-16 03:04:08] 2025-12-16 08:03:37,293 | INFO     | executing command: cat /etc/os-release
[2025-12-16 03:04:08] 2025-12-16 08:03:37,344 | INFO     | cat /etc/os-release:
[2025-12-16 03:04:08] NAME="CentOS Linux"
[2025-12-16 03:04:08] VERSION="7 (Core)"
[2025-12-16 03:04:08] ID="centos"
[2025-12-16 03:04:08] ID_LIKE="rhel fedora"
[2025-12-16 03:04:08] VERSION_ID="7"
[2025-12-16 03:04:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 03:04:08] ANSI_COLOR="0;31"
[2025-12-16 03:04:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 03:04:08] HOME_URL="https://www.centos.org/"
[2025-12-16 03:04:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 03:04:08] 
[2025-12-16 03:04:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 03:04:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 03:04:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 03:04:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 03:04:08] 
[2025-12-16 03:04:08] 2025-12-16 08:03:37,344 | INFO     | ***************************************
[2025-12-16 03:04:08] 2025-12-16 08:03:37,848 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-16 03:04:08] 2025-12-16 08:03:37,917 | INFO     | sufficient remaining disk space (94401200128 B)
[2025-12-16 03:04:08] 2025-12-16 08:03:37,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 03:04:08] 2025-12-16 08:03:37,918 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 03:04:08] 2025-12-16 08:03:37,918 | INFO     | update_server=False
[2025-12-16 03:04:08] 2025-12-16 08:03:37,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 03:04:08] 2025-12-16 08:03:38,225 | INFO     | all job control threads have been joined
[2025-12-16 03:04:08] 2025-12-16 08:03:38,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 03:04:08] 2025-12-16 08:03:38,632 | INFO     | all data control threads have been joined
[2025-12-16 03:04:08] 2025-12-16 08:03:38,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:04:08] 2025-12-16 08:03:38,828 | INFO     | aborting loop
[2025-12-16 03:04:08] 2025-12-16 08:03:38,925 | INFO     | [job] retrieve thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:38,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 03:04:08] 2025-12-16 08:03:39,058 | INFO     | all payload control threads have been joined
[2025-12-16 03:04:08] 2025-12-16 08:03:39,167 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,209 | INFO     | [payload] validate_post thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,231 | INFO     | [job] control thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 03:04:08] 2025-12-16 08:03:39,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,409 | INFO     | [payload] failed_post thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,639 | INFO     | [data] control thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,750 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,834 | INFO     | [job] job monitor thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,914 | INFO     | [job] validate thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,914 | INFO     | [data] copytool_in thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:39,981 | INFO     | [monitor] cgroup control has ended
[2025-12-16 03:04:08] 2025-12-16 08:03:40,065 | INFO     | [payload] control thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:40,234 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:40,238 | INFO     | [job] queue monitor thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:40,969 | INFO     | [data] copytool_out thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:42,393 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 03:04:08] 2025-12-16 08:03:43,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116570429248)>', '<ExcThread(monitor, started 140116219635456)>']
[2025-12-16 03:04:08] 2025-12-16 08:03:48,319 | INFO     | all workflow threads have been joined
[2025-12-16 03:04:08] 2025-12-16 08:03:48,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 03:04:08] 2025-12-16 08:03:48,320 | INFO     | traces error code: 0
[2025-12-16 03:04:08] 2025-12-16 08:03:48,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 03:04:08] 2025-12-16 08:04:07,848 | INFO     | PID=47538 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 03:04:08] 2025-12-16 08:04:07,849 | INFO     | .. there are 26 such processes running
[2025-12-16 03:04:08] 2025-12-16 08:04:07,850 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 03:04:08] 2025-12-16 08:04:07,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 03:04:08] 2025-12-16 08:04:07,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 03:04:08] 2025-12-16 08:04:07,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 03:04:08] 2025-12-16 08:04:07,850 | INFO     | [monitor] control thread has ended
[2025-12-16 03:04:08] 2025-12-16 08:04:08,211 [wrapper] ==== pilot stdout END ====
[2025-12-16 03:04:08] 2025-12-16 08:04:08,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 03:04:08] 2025-12-16 08:04:08,278 [wrapper] pilotpid: 47538
[2025-12-16 03:04:08] 2025-12-16 08:04:08,282 [wrapper] Pilot exit status: 0
[2025-12-16 03:04:08] 2025-12-16 08:04:08,325 [wrapper] pandaids: 6929808187
[2025-12-16 03:04:08] 2025-12-16 08:04:08,504 [wrapper] cleanup supervisor_pilot  644905 47539
[2025-12-16 03:04:08] 2025-12-16 08:04:08,510 [wrapper] Test setup, not cleaning
[2025-12-16 03:04:08] 2025-12-16 08:04:08,513 [wrapper] apfmon messages muted
[2025-12-16 03:04:08] 2025-12-16 08:04:08,516 [wrapper] ==== wrapper stdout END ====
[2025-12-16 03:04:08] 2025-12-16 08:04:08,519 [wrapper] ==== wrapper stderr END ====
[2025-12-16 03:04:08]  *** Error codes and diagnostics ***
[2025-12-16 03:04:08]     "exeErrorCode": 0,
[2025-12-16 03:04:08]     "exeErrorDiag": "",
[2025-12-16 03:04:08]     "pilotErrorCode": 0,
[2025-12-16 03:04:08]     "pilotErrorDiag": "",
[2025-12-16 03:04:08]  *** Listing of results directory ***
[2025-12-16 03:04:08] total 338600
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 10:52 pilot3.tar.gz
[2025-12-16 03:04:08] -rwx------. 1 boincer umatlas     36322 Dec 15 10:52 runpilot2-wrapper.sh
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 10:52 queuedata.json
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 03:04:08] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:11 run_atlas
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:11 job.xml
[2025-12-16 03:04:08] -rw-r--r--. 2 boincer umatlas 190611066 Dec 16 00:11 EVNT.47886829._000322.pool.root.1
[2025-12-16 03:04:08] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:11 start_atlas.sh
[2025-12-16 03:04:08] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:11 shared
[2025-12-16 03:04:08] -rw-r--r--. 2 boincer umatlas    592406 Dec 16 00:11 input.tar.gz
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:11 boinc_lockfile
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas      2537 Dec 16 00:11 pandaJob.out
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas        57 Dec 16 00:11 setup.sh.local
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas    994531 Dec 16 00:12 agis_schedconf.cvmfs.json
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas   1516240 Dec 16 00:12 agis_ddmendpoints.agis.ALL.json
[2025-12-16 03:04:08] drwx------. 5 boincer umatlas      4096 Dec 16 00:12 pilot3
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas 148734414 Dec 16 03:02 HITS.47886831._008498.pool.root.1
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas       529 Dec 16 03:02 boinc_task_state.xml
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas      1046 Dec 16 03:02 memory_monitor_summary.json
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas    452328 Dec 16 03:03 log.47886831._008498.job.log.tgz.1
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas      7835 Dec 16 03:03 heartbeat.json
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas      6877 Dec 16 03:04 init_data.xml
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 03:04 boinc_mmap_file
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas        27 Dec 16 03:04 wrapper_checkpoint.txt
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas       821 Dec 16 03:04 pilotlog.txt
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas        95 Dec 16 03:04 pilot_heartbeat.json
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas   1274677 Dec 16 03:04 log.47886831._008498.job.log.1
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas       357 Dec 16 03:04 output.list
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas       620 Dec 16 03:04 runtime_log
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas   1751040 Dec 16 03:04 result.tar.gz
[2025-12-16 03:04:08] -rw-------. 1 boincer umatlas       655 Dec 16 03:04 xN6NDm92Pp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK9XKDmB9rTPo.diag
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas      9350 Dec 16 03:04 runtime_log.err
[2025-12-16 03:04:08] -rw-r--r--. 1 boincer umatlas     20484 Dec 16 03:04 stderr.txt
[2025-12-16 03:04:09] HITS file was successfully produced:
[2025-12-16 03:04:09] -rw-------. 1 boincer umatlas 148734414 Dec 16 03:02 shared/HITS.pool.root.1
[2025-12-16 03:04:09]  *** Contents of shared directory: ***
[2025-12-16 03:04:09] total 333712
[2025-12-16 03:04:09] -rw-r--r--. 2 boincer umatlas 190611066 Dec 16 00:11 ATLAS.root_0
[2025-12-16 03:04:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:11 start_atlas.sh
[2025-12-16 03:04:09] -rw-r--r--. 2 boincer umatlas    592406 Dec 16 00:11 input.tar.gz
[2025-12-16 03:04:09] -rw-------. 1 boincer umatlas 148734414 Dec 16 03:02 HITS.pool.root.1
[2025-12-16 03:04:09] -rw-------. 1 boincer umatlas   1751040 Dec 16 03:04 result.tar.gz
03:04:10 (42269): run_atlas exited; CPU time 48160.352688
03:04:10 (42269): called boinc_finish(0)

</stderr_txt>
]]>

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