Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:59:15 (3022773): wrapper (7.7.26015): starting
09:59:15 (3022773): wrapper: running run_atlas (--nthreads 5)
[2025-12-16 09:59:15] Arguments: --nthreads 5
[2025-12-16 09:59:15] Threads: 5
[2025-12-16 09:59:15] Checking for CVMFS
[2025-12-16 09:59:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 09:59:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 09:59:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 09:59:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 09:59:15] 2.11.0.0 5186 4547 95440 154073 0 188 2917660 4096001 6410 130560 0 20079135 99.976 479958 7486 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-16 09:59:15] CVMFS is ok
[2025-12-16 09:59:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 09:59:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-16 09:59:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-16 09:59:15] Further information can be found at the LHC@home message board.
[2025-12-16 09:59:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 09:59:15] Checking for apptainer binary...
[2025-12-16 09:59:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 09:59:15] Running /usr/bin/apptainer --version
[2025-12-16 09:59:15] apptainer version 1.4.5
[2025-12-16 09:59:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 09:59:15] x32-linux4
[2025-12-16 09:59:15] apptainer works
[2025-12-16 09:59:15] Set ATHENA_PROC_NUMBER=5
[2025-12-16 09:59:15] Set ATHENA_CORE_NUMBER=5
[2025-12-16 09:59:15] Starting ATLAS job with PandaID=6929804477
[2025-12-16 09:59:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 12:48:49]  *** The last 200 lines of the pilot log: ***
[2025-12-16 12:48:49] 2025-12-16 17:48:00,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 12:48:49] 2025-12-16 17:48:00,206 | INFO     | time since job start (10115s) is within the limit (174528.0s)
[2025-12-16 12:48:49] 2025-12-16 17:48:01,970 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 12:48:49] 2025-12-16 17:48:01,979 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3806.8241562500007
[2025-12-16 12:48:49] 2025-12-16 17:48:01,986 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6929804477/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 12:48:49] 2025-12-16 17:48:01,987 | INFO     | extracted standard info from prmon json
[2025-12-16 12:48:49] 2025-12-16 17:48:01,987 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 12:48:49] 2025-12-16 17:48:01,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 12:48:49] 2025-12-16 17:48:01,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 12:48:49] 2025-12-16 17:48:01,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 12:48:49] 2025-12-16 17:48:01,996 | INFO     | fitting pss+swap vs Time
[2025-12-16 12:48:49] 2025-12-16 17:48:01,996 | INFO     | sum of square deviations: 1418361477.5
[2025-12-16 12:48:49] 2025-12-16 17:48:01,997 | INFO     | sum of deviations: 5043213796.000004
[2025-12-16 12:48:49] 2025-12-16 17:48:01,997 | INFO     | mean x: 1765902224.5
[2025-12-16 12:48:49] 2025-12-16 17:48:01,997 | INFO     | mean y: 2334987.493975904
[2025-12-16 12:48:49] 2025-12-16 17:48:01,997 | INFO     | intersect: -6276616184.165645
[2025-12-16 12:48:49] 2025-12-16 17:48:01,997 | INFO     | chi2: 1.7894610786869984
[2025-12-16 12:48:49] 2025-12-16 17:48:01,998 | INFO     | sum of square deviations: 1294014960.0
[2025-12-16 12:48:49] 2025-12-16 17:48:01,998 | INFO     | sum of deviations: 14270958052.0
[2025-12-16 12:48:49] 2025-12-16 17:48:01,998 | INFO     | mean x: 1765902072.0
[2025-12-16 12:48:49] 2025-12-16 17:48:01,998 | INFO     | mean y: 2346014.664596273
[2025-12-16 12:48:49] 2025-12-16 17:48:01,998 | INFO     | intersect: -19472787714.43223
[2025-12-16 12:48:49] 2025-12-16 17:48:01,999 | INFO     | chi2: 1.1150893386985623
[2025-12-16 12:48:49] 2025-12-16 17:48:01,999 | INFO     | current chi2=1.1150893386985623 (change=37.685745055894174 %)
[2025-12-16 12:48:49] 2025-12-16 17:48:01,999 | INFO     | sum of square deviations: 1177156955.0
[2025-12-16 12:48:49] 2025-12-16 17:48:01,999 | INFO     | sum of deviations: 13636486682.0
[2025-12-16 12:48:49] 2025-12-16 17:48:01,999 | INFO     | mean x: 1765901919.5
[2025-12-16 12:48:49] 2025-12-16 17:48:01,999 | INFO     | mean y: 2345186.4102564105
[2025-12-16 12:48:49] 2025-12-16 17:48:02,000 | INFO     | intersect: -20454313464.50005
[2025-12-16 12:48:49] 2025-12-16 17:48:02,000 | INFO     | chi2: 1.1160131785658538
[2025-12-16 12:48:49] 2025-12-16 17:48:02,000 | INFO     | current chi2=1.1160131785658538 (change=-0.08284895525678021 %)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,000 | INFO     | right removable region: 155
[2025-12-16 12:48:49] 2025-12-16 17:48:02,000 | INFO     | sum of square deviations: 1294014960.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | sum of deviations: -10747957952.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | mean x: 1765902377.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | mean y: 2353965.4409937887
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | intersect: 14669761284.544052
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | chi2: 0.7126160345780304
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | current chi2=0.7126160345780304 (change=60.177058720891196 %)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,004 | INFO     | sum of square deviations: 1177156955.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,005 | INFO     | sum of deviations: -8472743809.5
[2025-12-16 12:48:49] 2025-12-16 17:48:02,005 | INFO     | mean x: 1765902529.5
[2025-12-16 12:48:49] 2025-12-16 17:48:02,005 | INFO     | mean y: 2350990.5064102565
[2025-12-16 12:48:49] 2025-12-16 17:48:02,005 | INFO     | intersect: 12712669407.646898
[2025-12-16 12:48:49] 2025-12-16 17:48:02,005 | INFO     | chi2: 0.707746275654052
[2025-12-16 12:48:49] 2025-12-16 17:48:02,005 | INFO     | current chi2=0.707746275654052 (change=0.6833636471373995 %)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,006 | INFO     | left removable region: 20
[2025-12-16 12:48:49] 2025-12-16 17:48:02,006 | INFO     | sum of square deviations: 762879420.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,006 | INFO     | sum of deviations: 2744264950.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,006 | INFO     | mean x: 1765902499.0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,006 | INFO     | mean y: 2359081.5185185187
[2025-12-16 12:48:49] 2025-12-16 17:48:02,006 | INFO     | intersect: -6350026637.7385435
[2025-12-16 12:48:49] 2025-12-16 17:48:02,007 | INFO     | chi2: 0.0001672020279036656
[2025-12-16 12:48:49] 2025-12-16 17:48:02,007 | INFO     | current memory leak: 3.60 B/s (using 135 data points, chi2=0.00)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,007 | INFO     | could have reported an average CPU frequency of 3848 MHz (9 samples)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,007 | INFO     | ..............................
[2025-12-16 12:48:49] 2025-12-16 17:48:02,010 | INFO     | . Timing measurements:
[2025-12-16 12:48:49] 2025-12-16 17:48:02,010 | INFO     | . get job = 0 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,010 | INFO     | . initial setup = 1 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,010 | INFO     | . payload setup = 4 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,010 | INFO     | . stage-in = 0 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,010 | INFO     | . payload execution = 10080 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,011 | INFO     | . stage-out = 0 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,011 | INFO     | . log creation = 0 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,011 | INFO     | ..............................
[2025-12-16 12:48:49] 2025-12-16 17:48:02,139 | INFO     | 
[2025-12-16 12:48:49] 2025-12-16 17:48:02,139 | INFO     | job summary report
[2025-12-16 12:48:49] 2025-12-16 17:48:02,139 | INFO     | --------------------------------------------------
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | PanDA job id: 6929804477
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | task id: 47905907
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | errors: (none)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | pilot state: finished 
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | transexitcode: 0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | exeerrorcode: 0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | exeerrordiag: 
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | exitcode: 0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | exitmsg: OK
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | cpuconsumptiontime: 40582 s
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | nevents: 400
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | neventsw: 0
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | pid: 3033268
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | pgrp: 3033268
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | corecount: 5
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | event service: False
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | sizes: {0: 2283829, 1: 2283971, 5: 2284233, 11: 2284261, 10088: 2312974, 10089: 2321986, 10091: 2322170, 10102: 2322428}
[2025-12-16 12:48:49] 2025-12-16 17:48:02,140 | INFO     | --------------------------------------------------
[2025-12-16 12:48:49] 2025-12-16 17:48:02,141 | INFO     | 
[2025-12-16 12:48:49] 2025-12-16 17:48:02,141 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-12-16 12:48:49] 2025-12-16 17:48:02,172 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | job 6929804477 has completed (purged errors)
[2025-12-16 12:48:49] 2025-12-16 17:48:02,174 | INFO     | overall cleanup function is called
[2025-12-16 12:48:49] 2025-12-16 17:48:03,184 | INFO     | --- collectZombieJob: --- 10, [3033268]
[2025-12-16 12:48:49] 2025-12-16 17:48:03,184 | INFO     | zombie collector waiting for pid 3033268
[2025-12-16 12:48:49] 2025-12-16 17:48:03,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 12:48:49] 2025-12-16 17:48:03,184 | INFO     | collected zombie processes
[2025-12-16 12:48:49] 2025-12-16 17:48:03,185 | INFO     | will attempt to kill all subprocesses of pid=3033268
[2025-12-16 12:48:49] 2025-12-16 17:48:03,383 | INFO     | process IDs to be killed: [3033268] (in reverse order)
[2025-12-16 12:48:49] 2025-12-16 17:48:03,475 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 12:48:49] 2025-12-16 17:48:03,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 12:48:49] 2025-12-16 17:48:03,487 | INFO     | did not find any defunct processes belonging to 3033268
[2025-12-16 12:48:49] 2025-12-16 17:48:03,495 | INFO     | did not find any defunct processes belonging to 3033268
[2025-12-16 12:48:49] 2025-12-16 17:48:03,495 | INFO     | ready for new job
[2025-12-16 12:48:49] 2025-12-16 17:48:03,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 12:48:49] 2025-12-16 17:48:03,496 | INFO     | ***************************************
[2025-12-16 12:48:49] 2025-12-16 17:48:03,497 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 12:48:49] 2025-12-16 17:48:03,497 | INFO     | ***************************************
[2025-12-16 12:48:49] 2025-12-16 17:48:03,497 | INFO     | 
[2025-12-16 12:48:49] 2025-12-16 17:48:03,502 | INFO     | architecture information:
[2025-12-16 12:48:49] 2025-12-16 17:48:03,502 | INFO     | executing command: cat /etc/os-release
[2025-12-16 12:48:49] 2025-12-16 17:48:03,523 | INFO     | cat /etc/os-release:
[2025-12-16 12:48:49] NAME="CentOS Linux"
[2025-12-16 12:48:49] VERSION="7 (Core)"
[2025-12-16 12:48:49] ID="centos"
[2025-12-16 12:48:49] ID_LIKE="rhel fedora"
[2025-12-16 12:48:49] VERSION_ID="7"
[2025-12-16 12:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 12:48:49] ANSI_COLOR="0;31"
[2025-12-16 12:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 12:48:49] HOME_URL="https://www.centos.org/"
[2025-12-16 12:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 12:48:49] 
[2025-12-16 12:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 12:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 12:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 12:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 12:48:49] 
[2025-12-16 12:48:49] 2025-12-16 17:48:03,524 | INFO     | ***************************************
[2025-12-16 12:48:49] 2025-12-16 17:48:04,026 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-12-16 12:48:49] 2025-12-16 17:48:04,050 | INFO     | sufficient remaining disk space (142781448192 B)
[2025-12-16 12:48:49] 2025-12-16 17:48:04,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 12:48:49] 2025-12-16 17:48:04,050 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 12:48:49] 2025-12-16 17:48:04,050 | INFO     | update_server=False
[2025-12-16 12:48:49] 2025-12-16 17:48:04,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 12:48:49] 2025-12-16 17:48:04,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:48:49] 2025-12-16 17:48:04,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 12:48:49] 2025-12-16 17:48:04,051 | INFO     | aborting loop
[2025-12-16 12:48:49] 2025-12-16 17:48:04,067 | INFO     | all data control threads have been joined
[2025-12-16 12:48:49] 2025-12-16 17:48:04,482 | INFO     | all job control threads have been joined
[2025-12-16 12:48:49] 2025-12-16 17:48:04,515 | INFO     | all payload control threads have been joined
[2025-12-16 12:48:49] 2025-12-16 17:48:05,055 | INFO     | [job] job monitor thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,056 | INFO     | [job] retrieve thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,056 | INFO     | [job] queue monitor thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,072 | INFO     | [data] control thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 12:48:49] 2025-12-16 17:48:05,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,487 | INFO     | [job] control thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,520 | INFO     | [payload] control thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,673 | INFO     | [data] copytool_in thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,801 | INFO     | [payload] validate_post thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,820 | INFO     | [job] validate thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,856 | INFO     | [payload] failed_post thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:05,904 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:06,103 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:06,184 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:06,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 12:48:49] 2025-12-16 17:48:07,277 | INFO     | [data] copytool_out thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:10,725 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 12:48:49] 2025-12-16 17:48:33,482 | INFO     | PID=3026610 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 12:48:49] 2025-12-16 17:48:33,483 | INFO     | .. there are 8 such processes running
[2025-12-16 12:48:49] 2025-12-16 17:48:33,483 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 12:48:49] 2025-12-16 17:48:33,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 12:48:49] 2025-12-16 17:48:33,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 12:48:49] 2025-12-16 17:48:41,793 | INFO     | [monitor] cgroup control has ended
[2025-12-16 12:48:49] 2025-12-16 17:48:43,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133971688490816)>', '<ExcThread(monitor, started 133971337787136)>']
[2025-12-16 12:48:49] 2025-12-16 17:48:44,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 12:48:49] 2025-12-16 17:48:44,541 | INFO     | [monitor] control thread has ended
[2025-12-16 12:48:49] 2025-12-16 17:48:48,626 | INFO     | all workflow threads have been joined
[2025-12-16 12:48:49] 2025-12-16 17:48:48,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 12:48:49] 2025-12-16 17:48:48,627 | INFO     | traces error code: 0
[2025-12-16 12:48:49] 2025-12-16 17:48:48,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 12:48:49] 2025-12-16 17:48:48,807 [wrapper] ==== pilot stdout END ====
[2025-12-16 12:48:49] 2025-12-16 17:48:48,815 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 12:48:49] 2025-12-16 17:48:48,820 [wrapper] pilotpid: 3026610
[2025-12-16 12:48:49] 2025-12-16 17:48:48,825 [wrapper] Pilot exit status: 0
[2025-12-16 12:48:49] 2025-12-16 17:48:48,841 [wrapper] pandaids: 6929804477
[2025-12-16 12:48:49] 2025-12-16 17:48:48,910 [wrapper] cleanup supervisor_pilot 3278256 3026611
[2025-12-16 12:48:49] 2025-12-16 17:48:48,914 [wrapper] Test setup, not cleaning
[2025-12-16 12:48:49] 2025-12-16 17:48:48,919 [wrapper] apfmon messages muted
[2025-12-16 12:48:49] 2025-12-16 17:48:48,927 [wrapper] ==== wrapper stdout END ====
[2025-12-16 12:48:49] 2025-12-16 17:48:48,932 [wrapper] ==== wrapper stderr END ====
[2025-12-16 12:48:49]  *** Error codes and diagnostics ***
[2025-12-16 12:48:49]     "exeErrorCode": 0,
[2025-12-16 12:48:49]     "exeErrorDiag": "",
[2025-12-16 12:48:49]     "pilotErrorCode": 0,
[2025-12-16 12:48:49]     "pilotErrorDiag": "",
[2025-12-16 12:48:49]  *** Listing of results directory ***
[2025-12-16 12:48:49] total 401724
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-16 12:48:49] -rwx------ 1 boinc boinc     36322 Dec 15 08:27 runpilot2-wrapper.sh
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc      5112 Dec 15 08:27 queuedata.json
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc       100 Dec 16 09:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 12:48:49] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 09:59 run_atlas
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc       105 Dec 16 09:59 job.xml
[2025-12-16 12:48:49] -rw-r--r-- 2 boinc boinc 204093743 Dec 16 09:59 EVNT.47905905._000012.pool.root.1
[2025-12-16 12:48:49] -rw-r--r-- 2 boinc boinc     15847 Dec 16 09:59 start_atlas.sh
[2025-12-16 12:48:49] drwxrwx--x 2 boinc boinc      4096 Dec 16 09:59 shared
[2025-12-16 12:48:49] -rw-r--r-- 2 boinc boinc    592375 Dec 16 09:59 input.tar.gz
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc      9742 Dec 16 09:59 init_data.xml
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc         0 Dec 16 09:59 boinc_setup_complete
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc         0 Dec 16 09:59 boinc_lockfile
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc      2475 Dec 16 09:59 pandaJob.out
[2025-12-16 12:48:49] -rw------- 1 boinc boinc    987355 Dec 16 09:59 agis_schedconf.cvmfs.json
[2025-12-16 12:48:49] -rw------- 1 boinc boinc   1516240 Dec 16 09:59 agis_ddmendpoints.agis.ALL.json
[2025-12-16 12:48:49] drwx------ 5 boinc boinc      4096 Dec 16 09:59 pilot3
[2025-12-16 12:48:49] -rw------- 1 boinc boinc 199700486 Dec 16 12:47 HITS.47905907._000272.pool.root.1
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc       531 Dec 16 12:47 boinc_task_state.xml
[2025-12-16 12:48:49] -rw------- 1 boinc boinc      1026 Dec 16 12:47 memory_monitor_summary.json
[2025-12-16 12:48:49] -rw------- 1 boinc boinc    370095 Dec 16 12:47 log.47905907._000272.job.log.tgz.1
[2025-12-16 12:48:49] -rw------- 1 boinc boinc      7734 Dec 16 12:48 heartbeat.json
[2025-12-16 12:48:49] -rw------- 1 boinc boinc        95 Dec 16 12:48 pilot_heartbeat.json
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc        28 Dec 16 12:48 wrapper_checkpoint.txt
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc      8192 Dec 16 12:48 boinc_mmap_file
[2025-12-16 12:48:49] -rw------- 1 boinc boinc      4831 Dec 16 12:48 pilotlog.txt
[2025-12-16 12:48:49] -rw------- 1 boinc boinc   1454216 Dec 16 12:48 log.47905907._000272.job.log.1
[2025-12-16 12:48:49] -rw------- 1 boinc boinc       357 Dec 16 12:48 output.list
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc       620 Dec 16 12:48 runtime_log
[2025-12-16 12:48:49] -rw------- 1 boinc boinc   1843200 Dec 16 12:48 result.tar.gz
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc      8893 Dec 16 12:48 runtime_log.err
[2025-12-16 12:48:49] -rw------- 1 boinc boinc       646 Dec 16 12:48 6KFMDmDnNp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn3XKDmPS42Gn.diag
[2025-12-16 12:48:49] -rw-r--r-- 1 boinc boinc     21187 Dec 16 12:48 stderr.txt
[2025-12-16 12:48:49] HITS file was successfully produced:
[2025-12-16 12:48:49] -rw------- 1 boinc boinc 199700486 Dec 16 12:47 shared/HITS.pool.root.1
[2025-12-16 12:48:49]  *** Contents of shared directory: ***
[2025-12-16 12:48:49] total 396740
[2025-12-16 12:48:49] -rw-r--r-- 2 boinc boinc 204093743 Dec 16 09:59 ATLAS.root_0
[2025-12-16 12:48:49] -rw-r--r-- 2 boinc boinc     15847 Dec 16 09:59 start_atlas.sh
[2025-12-16 12:48:49] -rw-r--r-- 2 boinc boinc    592375 Dec 16 09:59 input.tar.gz
[2025-12-16 12:48:49] -rw------- 1 boinc boinc 199700486 Dec 16 12:47 HITS.pool.root.1
[2025-12-16 12:48:49] -rw------- 1 boinc boinc   1843200 Dec 16 12:48 result.tar.gz
12:48:50 (3022773): run_atlas exited; CPU time 40726.799273
12:48:50 (3022773): called boinc_finish(0)

</stderr_txt>
]]>

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