Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:56 (136944): wrapper (7.7.26015): starting
00:04:56 (136944): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 00:04:56] Arguments: --nthreads 9
[2025-12-16 00:04:56] Threads: 9
[2025-12-16 00:04:56] Checking for CVMFS
[2025-12-16 00:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:04:57] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:04:59] 2.13.3.0 5641 19067 201268 154058 1 218 30686472 32935936 14829 16776704 0 47817726 99.211 91423077 36250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:04:59] CVMFS is ok
[2025-12-16 00:04:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:04:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:04:59] Further information can be found at the LHC@home message board.
[2025-12-16 00:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:04:59] Checking for apptainer binary...
[2025-12-16 00:04:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:04:59] Running /usr/bin/apptainer --version
[2025-12-16 00:04:59] apptainer version 1.4.5-2.el9
[2025-12-16 00:04:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:05:00] c6-1-26-1.aglt2.org
[2025-12-16 00:05:00] apptainer works
[2025-12-16 00:05:00] Set ATHENA_PROC_NUMBER=9
[2025-12-16 00:05:00] Set ATHENA_CORE_NUMBER=9
[2025-12-16 00:05:00] Starting ATLAS job with PandaID=6929962571
[2025-12-16 00:05:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 08:21:22]  *** The last 200 lines of the pilot log: ***
[2025-12-16 08:21:22] 2025-12-16 12:30:53,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 08:21:22] 2025-12-16 12:30:54,080 | INFO     | time since job start (26674s) is within the limit (174528.0s)
[2025-12-16 08:21:22] 2025-12-16 12:30:56,087 | INFO     | time since job start (26676s) is within the limit (174528.0s)
[2025-12-16 08:21:22] 2025-12-16 12:30:56,111 | INFO     | monitor loop #1444: job 0:6929962571 is in state 'finished'
[2025-12-16 08:21:22] 2025-12-16 12:30:56,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 08:21:22] 2025-12-16 12:30:58,128 | INFO     | time since job start (26678s) is within the limit (174528.0s)
[2025-12-16 08:21:22] 2025-12-16 12:30:58,616 | INFO     | monitor loop #1445: job 0:6929962571 is in state 'finished'
[2025-12-16 08:21:22] 2025-12-16 12:30:58,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,125 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 08:21:22] 2025-12-16 12:30:59,138 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2763.765696428571
[2025-12-16 08:21:22] 2025-12-16 12:30:59,155 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6929962571/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,178 | INFO     | extracted standard info from prmon json
[2025-12-16 08:21:22] 2025-12-16 12:30:59,178 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 08:21:22] 2025-12-16 12:30:59,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 08:21:22] 2025-12-16 12:30:59,179 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 08:21:22] 2025-12-16 12:30:59,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 08:21:22] 2025-12-16 12:30:59,259 | INFO     | fitting pss+swap vs Time
[2025-12-16 08:21:22] 2025-12-16 12:30:59,296 | INFO     | sum of square deviations: 25524724852.046185
[2025-12-16 08:21:22] 2025-12-16 12:30:59,335 | INFO     | sum of deviations: 252528041814.47134
[2025-12-16 08:21:22] 2025-12-16 12:30:59,335 | INFO     | mean x: 1765874990.4597702
[2025-12-16 08:21:22] 2025-12-16 12:30:59,335 | INFO     | mean y: 2507077.512643678
[2025-12-16 08:21:22] 2025-12-16 12:30:59,335 | INFO     | intersect: -17468120167.826927
[2025-12-16 08:21:22] 2025-12-16 12:30:59,336 | INFO     | chi2: 4.568167085669703
[2025-12-16 08:21:22] 2025-12-16 12:30:59,373 | INFO     | sum of square deviations: 24654732328.476654
[2025-12-16 08:21:22] 2025-12-16 12:30:59,377 | INFO     | sum of deviations: 275897797855.8604
[2025-12-16 08:21:22] 2025-12-16 12:30:59,378 | INFO     | mean x: 1765874837.9651163
[2025-12-16 08:21:22] 2025-12-16 12:30:59,378 | INFO     | mean y: 2511128.5906976745
[2025-12-16 08:21:22] 2025-12-16 12:30:59,378 | INFO     | intersect: -19758440748.421738
[2025-12-16 08:21:22] 2025-12-16 12:30:59,379 | INFO     | chi2: 3.8796666955137824
[2025-12-16 08:21:22] 2025-12-16 12:30:59,379 | INFO     | current chi2=3.8796666955137824 (change=15.071698938415365 %)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,379 | INFO     | right removable region: 429
[2025-12-16 08:21:22] 2025-12-16 12:30:59,379 | INFO     | sum of square deviations: 24654610328.47666
[2025-12-16 08:21:22] 2025-12-16 12:30:59,383 | INFO     | sum of deviations: 122262021726.13953
[2025-12-16 08:21:22] 2025-12-16 12:30:59,384 | INFO     | mean x: 1765875142.9651163
[2025-12-16 08:21:22] 2025-12-16 12:30:59,384 | INFO     | mean y: 2529878.4093023255
[2025-12-16 08:21:22] 2025-12-16 12:30:59,384 | INFO     | intersect: -8754431282.947271
[2025-12-16 08:21:22] 2025-12-16 12:30:59,384 | INFO     | chi2: 1.305694008244397
[2025-12-16 08:21:22] 2025-12-16 12:30:59,385 | INFO     | current chi2=1.305694008244397 (change=71.41755142143668 %)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,385 | INFO     | sum of square deviations: 23804496179.882347
[2025-12-16 08:21:22] 2025-12-16 12:30:59,389 | INFO     | sum of deviations: 77643649006.82346
[2025-12-16 08:21:22] 2025-12-16 12:30:59,389 | INFO     | mean x: 1765875295.4705882
[2025-12-16 08:21:22] 2025-12-16 12:30:59,389 | INFO     | mean y: 2537879.505882353
[2025-12-16 08:21:22] 2025-12-16 12:30:59,389 | INFO     | intersect: -5757256429.739468
[2025-12-16 08:21:22] 2025-12-16 12:30:59,390 | INFO     | chi2: 0.9797835848670864
[2025-12-16 08:21:22] 2025-12-16 12:30:59,390 | INFO     | current chi2=0.9797835848670864 (change=24.960704523376158 %)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,390 | INFO     | left removable region: 20
[2025-12-16 08:21:22] 2025-12-16 12:30:59,391 | INFO     | sum of square deviations: 21216149177.92665
[2025-12-16 08:21:22] 2025-12-16 12:30:59,394 | INFO     | sum of deviations: 50266110329.501274
[2025-12-16 08:21:22] 2025-12-16 12:30:59,394 | INFO     | mean x: 1765875417.4718826
[2025-12-16 08:21:22] 2025-12-16 12:30:59,394 | INFO     | mean y: 2552197.608801956
[2025-12-16 08:21:22] 2025-12-16 12:30:59,395 | INFO     | intersect: -4181227234.6712933
[2025-12-16 08:21:22] 2025-12-16 12:30:59,395 | INFO     | chi2: 0.04827473366641483
[2025-12-16 08:21:22] 2025-12-16 12:30:59,395 | INFO     | current memory leak: 2.37 B/s (using 409 data points, chi2=0.05)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,396 | INFO     | could have reported an average CPU frequency of 2808 MHz (18 samples)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | ..............................
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . Timing measurements:
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . get job = 0 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . initial setup = 8 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . payload setup = 49 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . stage-in = 0 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . payload execution = 26519 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . stage-out = 2 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | . log creation = 0 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,397 | INFO     | ..............................
[2025-12-16 08:21:22] 2025-12-16 12:30:59,528 | INFO     | 
[2025-12-16 08:21:22] 2025-12-16 12:30:59,528 | INFO     | job summary report
[2025-12-16 08:21:22] 2025-12-16 12:30:59,528 | INFO     | --------------------------------------------------
[2025-12-16 08:21:22] 2025-12-16 12:30:59,528 | INFO     | PanDA job id: 6929962571
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | task id: 47898763
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | errors: (none)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | pilot state: finished 
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | transexitcode: 0
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | exeerrorcode: 0
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | exeerrordiag: 
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | exitcode: 0
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | exitmsg: OK
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | cpuconsumptiontime: 60706 s
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | nevents: 400
[2025-12-16 08:21:22] 2025-12-16 12:30:59,529 | INFO     | neventsw: 0
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | pid: 189999
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | pgrp: 189999
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | corecount: 9
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | event service: False
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | sizes: {0: 2283130, 1: 2283731, 2: 2283815, 3: 2283871, 4: 2284042, 5: 2284070, 16: 2284254, 27: 2284282, 39: 2284310, 41: 2284600, 50: 2284628, 26573: 2320944, 26
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | --------------------------------------------------
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | 
[2025-12-16 08:21:22] 2025-12-16 12:30:59,530 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-12-16 08:21:22] 2025-12-16 12:30:59,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | job 6929962571 has completed (purged errors)
[2025-12-16 08:21:22] 2025-12-16 12:30:59,598 | INFO     | overall cleanup function is called
[2025-12-16 08:21:22] 2025-12-16 12:31:00,613 | INFO     | --- collectZombieJob: --- 10, [189999]
[2025-12-16 08:21:22] 2025-12-16 12:31:00,613 | INFO     | zombie collector waiting for pid 189999
[2025-12-16 08:21:22] 2025-12-16 12:31:00,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 08:21:22] 2025-12-16 12:31:00,614 | INFO     | collected zombie processes
[2025-12-16 08:21:22] 2025-12-16 12:31:00,614 | INFO     | will attempt to kill all subprocesses of pid=189999
[2025-12-16 08:21:22] 2025-12-16 12:31:01,845 | INFO     | process IDs to be killed: [189999] (in reverse order)
[2025-12-16 08:21:22] 2025-12-16 12:31:01,963 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 08:21:22] 2025-12-16 12:31:01,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 08:21:22] 2025-12-16 12:31:01,977 | INFO     | did not find any defunct processes belonging to 189999
[2025-12-16 08:21:22] 2025-12-16 12:31:01,989 | INFO     | did not find any defunct processes belonging to 189999
[2025-12-16 08:21:22] 2025-12-16 12:31:01,990 | INFO     | ready for new job
[2025-12-16 08:21:22] 2025-12-16 12:31:01,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 08:21:22] 2025-12-16 12:31:01,995 | INFO     | ***************************************
[2025-12-16 08:21:22] 2025-12-16 12:31:02,014 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 08:21:22] 2025-12-16 12:31:02,015 | INFO     | ***************************************
[2025-12-16 08:21:22] 2025-12-16 12:31:02,015 | INFO     | 
[2025-12-16 08:21:22] 2025-12-16 12:31:02,022 | INFO     | architecture information:
[2025-12-16 08:21:22] 2025-12-16 12:31:02,023 | INFO     | executing command: cat /etc/os-release
[2025-12-16 08:21:22] 2025-12-16 12:31:02,062 | INFO     | cat /etc/os-release:
[2025-12-16 08:21:22] NAME="CentOS Linux"
[2025-12-16 08:21:22] VERSION="7 (Core)"
[2025-12-16 08:21:22] ID="centos"
[2025-12-16 08:21:22] ID_LIKE="rhel fedora"
[2025-12-16 08:21:22] VERSION_ID="7"
[2025-12-16 08:21:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 08:21:22] ANSI_COLOR="0;31"
[2025-12-16 08:21:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 08:21:22] HOME_URL="https://www.centos.org/"
[2025-12-16 08:21:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 08:21:22] 
[2025-12-16 08:21:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 08:21:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 08:21:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 08:21:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 08:21:22] 
[2025-12-16 08:21:22] 2025-12-16 12:31:02,063 | INFO     | ***************************************
[2025-12-16 08:21:22] 2025-12-16 12:31:02,567 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-12-16 08:21:22] 2025-12-16 12:31:02,613 | INFO     | sufficient remaining disk space (74106011648 B)
[2025-12-16 08:21:22] 2025-12-16 12:31:02,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 08:21:22] 2025-12-16 12:31:02,614 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 08:21:22] 2025-12-16 12:31:02,614 | INFO     | update_server=False
[2025-12-16 08:21:22] 2025-12-16 12:31:02,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 08:21:22] 2025-12-16 12:31:02,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 08:21:22] 2025-12-16 12:31:02,615 | INFO     | aborting loop
[2025-12-16 08:21:22] 2025-12-16 12:31:02,730 | INFO     | all job control threads have been joined
[2025-12-16 08:21:22] 2025-12-16 12:31:03,124 | INFO     | all data control threads have been joined
[2025-12-16 08:21:22] 2025-12-16 12:31:03,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 08:21:22] 2025-12-16 12:31:03,620 | INFO     | [job] retrieve thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:03,621 | INFO     | [job] job monitor thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:03,695 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:03,735 | INFO     | [job] control thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:03,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 08:21:22] 2025-12-16 12:31:04,026 | INFO     | [data] copytool_in thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:04,038 | INFO     | all payload control threads have been joined
[2025-12-16 08:21:22] 2025-12-16 12:31:04,146 | INFO     | [data] control thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:04,448 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:04,477 | INFO     | [payload] validate_post thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:04,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 08:21:22] 2025-12-16 12:31:04,744 | INFO     | [payload] failed_post thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:04,993 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:05,012 | INFO     | [job] validate thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:05,044 | INFO     | [payload] control thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:05,547 | INFO     | [job] queue monitor thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:05,548 | INFO     | [data] copytool_out thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:07,928 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:10,901 | INFO     | [monitor] cgroup control has ended
[2025-12-16 08:21:22] 2025-12-16 12:31:12,940 | INFO     | job.realtimelogging is not enabled
[2025-12-16 08:21:22] 2025-12-16 12:31:13,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 08:21:22] 2025-12-16 12:31:15,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504543766336)>', '<ExcThread(monitor, started 140503530067712)>']
[2025-12-16 08:21:22] 2025-12-16 12:31:20,249 | INFO     | all workflow threads have been joined
[2025-12-16 08:21:22] 2025-12-16 12:31:20,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 08:21:22] 2025-12-16 12:31:20,250 | INFO     | traces error code: 0
[2025-12-16 08:21:22] 2025-12-16 12:31:20,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 08:21:22] 2025-12-16 12:31:31,610 | INFO     | PID=151548 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 08:21:22] 2025-12-16 12:31:31,611 | INFO     | .. there are 18 such processes running
[2025-12-16 08:21:22] 2025-12-16 12:31:31,611 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 08:21:22] 2025-12-16 12:31:31,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 08:21:22] 2025-12-16 12:31:31,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 08:21:22] 2025-12-16 12:31:31,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 08:21:22] 2025-12-16 12:31:31,612 | INFO     | [monitor] control thread has ended
[2025-12-16 08:21:22] 2025-12-16 12:31:32,115 [wrapper] ==== pilot stdout END ====
[2025-12-16 08:21:22] 2025-12-16 12:31:32,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 08:21:22] 2025-12-16 12:31:32,129 [wrapper] pilotpid: 151548
[2025-12-16 08:21:22] 2025-12-16 12:31:32,133 [wrapper] Pilot exit status: 0
[2025-12-16 08:21:22] 2025-12-16 12:31:32,155 [wrapper] pandaids: 6929962571
[2025-12-16 08:21:22] 2025-12-16 12:31:32,230 [wrapper] cleanup supervisor_pilot 1526248 151549
[2025-12-16 08:21:22] 2025-12-16 12:31:32,234 [wrapper] Test setup, not cleaning
[2025-12-16 08:21:22] 2025-12-16 12:31:32,256 [wrapper] apfmon messages muted
[2025-12-16 08:21:22] 2025-12-16 12:31:32,278 [wrapper] ==== wrapper stdout END ====
[2025-12-16 08:21:22] 2025-12-16 12:31:32,302 [wrapper] ==== wrapper stderr END ====
[2025-12-16 08:21:22]  *** Error codes and diagnostics ***
[2025-12-16 08:21:22]     "exeErrorCode": 0,
[2025-12-16 08:21:22]     "exeErrorDiag": "",
[2025-12-16 08:21:22]     "pilotErrorCode": 0,
[2025-12-16 08:21:22]     "pilotErrorDiag": "",
[2025-12-16 08:21:22]  *** Listing of results directory ***
[2025-12-16 08:21:22] total 451296
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 13:24 pilot3.tar.gz
[2025-12-16 08:21:22] -rwx------. 1 boincer umatlas     36322 Dec 15 13:28 runpilot2-wrapper.sh
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 13:31 queuedata.json
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 08:21:22] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:04 run_atlas
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:04 job.xml
[2025-12-16 08:21:22] -rw-r--r--. 2 boincer umatlas 226272543 Dec 16 00:04 EVNT.47898761._000708.pool.root.1
[2025-12-16 08:21:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 08:21:22] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:04 shared
[2025-12-16 08:21:22] -rw-r--r--. 2 boincer umatlas    592396 Dec 16 00:04 input.tar.gz
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:04 boinc_lockfile
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas      2508 Dec 16 00:05 pandaJob.out
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas        57 Dec 16 00:05 setup.sh.local
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas    994531 Dec 16 00:06 agis_schedconf.cvmfs.json
[2025-12-16 08:21:22] drwx------. 5 boincer umatlas      4096 Dec 16 00:06 pilot3
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas       530 Dec 16 07:29 boinc_task_state.xml
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas 224505448 Dec 16 07:29 HITS.47898763._017751.pool.root.1
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas      1040 Dec 16 07:30 memory_monitor_summary.json
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas   1516240 Dec 16 07:30 agis_ddmendpoints.agis.ALL.json
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas    616890 Dec 16 07:30 log.47898763._017751.job.log.tgz.1
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas      7822 Dec 16 07:30 heartbeat.json
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas       822 Dec 16 07:31 pilotlog.txt
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas        95 Dec 16 07:31 pilot_heartbeat.json
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas   3096832 Dec 16 07:31 log.47898763._017751.job.log.1
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas       357 Dec 16 07:31 output.list
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas       620 Dec 16 07:31 runtime_log
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas   3737600 Dec 16 07:31 result.tar.gz
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 07:31 runtime_log.err
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas       657 Dec 16 07:31 DjLODmEUSp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm28TKDmuWdZQo.diag
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas      6842 Dec 16 08:19 init_data.xml
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas        26 Dec 16 08:21 wrapper_checkpoint.txt
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 08:21 boinc_mmap_file
[2025-12-16 08:21:22] -rw-r--r--. 1 boincer umatlas     21424 Dec 16 08:21 stderr.txt
[2025-12-16 08:21:22] HITS file was successfully produced:
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas 224505448 Dec 16 07:29 shared/HITS.pool.root.1
[2025-12-16 08:21:22]  *** Contents of shared directory: ***
[2025-12-16 08:21:22] total 444468
[2025-12-16 08:21:22] -rw-r--r--. 2 boincer umatlas 226272543 Dec 16 00:04 ATLAS.root_0
[2025-12-16 08:21:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:04 start_atlas.sh
[2025-12-16 08:21:22] -rw-r--r--. 2 boincer umatlas    592396 Dec 16 00:04 input.tar.gz
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas 224505448 Dec 16 07:29 HITS.pool.root.1
[2025-12-16 08:21:22] -rw-------. 1 boincer umatlas   3737600 Dec 16 07:31 result.tar.gz
08:21:24 (136944): run_atlas exited; CPU time 61597.497397
08:21:24 (136944): called boinc_finish(0)

</stderr_txt>
]]>

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