Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:02 (1423485): wrapper (7.7.26015): starting
13:28:02 (1423485): wrapper: running run_atlas (--nthreads 4)
[2025-12-16 13:28:02] Arguments: --nthreads 4
[2025-12-16 13:28:02] Threads: 4
[2025-12-16 13:28:02] Checking for CVMFS
[2025-12-16 13:28:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 13:28:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 13:28:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 13:28:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 13:28:03] 2.9.2.0 31218 4947 100548 154071 0 56 19122573 36864000 0 130560 0 3658822 99.990 181685 9855 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-16 13:28:03] CVMFS is ok
[2025-12-16 13:28:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 13:28:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 13:28:03] Further information can be found at the LHC@home message board.
[2025-12-16 13:28:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 13:28:03] Checking for apptainer binary...
[2025-12-16 13:28:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 13:28:03] Running /usr/bin/apptainer --version
[2025-12-16 13:28:03] apptainer version 1.4.1-1.1
[2025-12-16 13:28:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 13:28:03] thA332a
[2025-12-16 13:28:03] apptainer works
[2025-12-16 13:28:03] Set ATHENA_PROC_NUMBER=4
[2025-12-16 13:28:03] Set ATHENA_CORE_NUMBER=4
[2025-12-16 13:28:03] Starting ATLAS job with PandaID=6929962341
[2025-12-16 13:28:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 14:42:21]  *** The last 200 lines of the pilot log: ***
[2025-12-16 14:42:21] 2025-12-16 13:41:25,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 14:42:21] 2025-12-16 13:41:25,118 | INFO     | aborting loop
[2025-12-16 14:42:21] 2025-12-16 13:41:25,190 | INFO     | all data control threads have been joined
[2025-12-16 14:42:21] 2025-12-16 13:41:25,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 14:42:21] 2025-12-16 13:41:25,774 | INFO     | [job] retrieve thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:25,774 | INFO     | [job] queue monitor thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:25,874 | INFO     | [data] copytool_in thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:26,002 | INFO     | all job control threads have been joined
[2025-12-16 14:42:21] 2025-12-16 13:41:26,124 | INFO     | [job] job monitor thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:26,196 | INFO     | [data] control thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:26,271 | INFO     | all payload control threads have been joined
[2025-12-16 14:42:21] 2025-12-16 13:41:26,280 | INFO     | [payload] validate_post thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:26,920 | INFO     | [job] validate thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,008 | INFO     | [job] control thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,016 | INFO     | [payload] failed_post thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,051 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,075 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,245 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,277 | INFO     | [payload] control thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:27,652 | INFO     | [data] copytool_out thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:28,775 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 14:42:21] 2025-12-16 13:41:54,945 | INFO     | PID=1427298 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 14:42:21] 2025-12-16 13:41:54,946 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 14:42:21] 2025-12-16 13:41:54,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 14:42:21] 2025-12-16 13:41:54,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 14:42:21] 2025-12-16 13:42:15,841 | INFO     | [monitor] cgroup control has ended
[2025-12-16 14:42:21] 2025-12-16 13:42:16,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802195355456)>', '<ExcThread(monitor, started 139801554564864)>']
[2025-12-16 14:42:21] 2025-12-16 13:42:17,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 14:42:21] 2025-12-16 13:42:17,055 | INFO     | [monitor] control thread has ended
[2025-12-16 14:42:21] 2025-12-16 13:42:21,525 | INFO     | all workflow threads have been joined
[2025-12-16 14:42:21] 2025-12-16 13:42:21,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 14:42:21] 2025-12-16 13:42:21,526 | INFO     | traces error code: 0
[2025-12-16 14:42:21] 2025-12-16 13:42:21,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 14:42:21] 2025-12-16 13:42:21,605 [wrapper] ==== pilot stdout END ====
[2025-12-16 14:42:21] 2025-12-16 13:42:21,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 14:42:21] 2025-12-16 13:42:21,612 [wrapper] pilotpid: 1427298
[2025-12-16 14:42:21] 2025-12-16 13:42:21,616 [wrapper] Pilot exit status: 0
[2025-12-16 14:42:21] 2025-12-16 13:42:21,627 [wrapper] pandaids: 6929962341
[2025-12-16 14:42:21] 2025-12-16 13:42:21,648 [wrapper] cleanup supervisor_pilot 1443420 1427299
[2025-12-16 14:42:21] 2025-12-16 13:42:21,652 [wrapper] Test setup, not cleaning
[2025-12-16 14:42:21] 2025-12-16 13:42:21,656 [wrapper] apfmon messages muted
[2025-12-16 14:42:21] 2025-12-16 13:42:21,659 [wrapper] ==== wrapper stdout END ====
[2025-12-16 14:42:21] 2025-12-16 13:42:21,663 [wrapper] ==== wrapper stderr END ====
[2025-12-16 14:42:21]  *** Error codes and diagnostics ***
[2025-12-16 14:42:21]     "exeErrorCode": 0,
[2025-12-16 14:42:21]     "exeErrorDiag": "",
[2025-12-16 14:42:21]     "pilotErrorCode": 0,
[2025-12-16 14:42:21]     "pilotErrorDiag": "",
[2025-12-16 14:42:21]  *** Listing of results directory ***
[2025-12-16 14:42:21] total 337812
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc    579449 Dec 15 19:24 pilot3.tar.gz
[2025-12-16 14:42:21] -rwx------ 1 boinc boinc     36322 Dec 15 19:28 runpilot2-wrapper.sh
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc      5112 Dec 15 19:31 queuedata.json
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc       100 Dec 16 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 14:42:21] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 13:28 run_atlas
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc       105 Dec 16 13:28 job.xml
[2025-12-16 14:42:21] -rw-r--r-- 2 boinc boinc 192845369 Dec 16 13:28 EVNT.47886829._000350.pool.root.1
[2025-12-16 14:42:21] -rw-r--r-- 2 boinc boinc    592411 Dec 16 13:28 input.tar.gz
[2025-12-16 14:42:21] -rw-r--r-- 2 boinc boinc     15847 Dec 16 13:28 start_atlas.sh
[2025-12-16 14:42:21] drwxrwx--x 2 boinc boinc      4096 Dec 16 13:28 shared
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc         0 Dec 16 13:28 boinc_setup_complete
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc      6370 Dec 16 13:28 init_data.xml
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc         0 Dec 16 13:28 boinc_lockfile
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc      2537 Dec 16 13:28 pandaJob.out
[2025-12-16 14:42:21] -rw------- 1 boinc boinc    990993 Dec 16 13:28 agis_schedconf.cvmfs.json
[2025-12-16 14:42:21] -rw------- 1 boinc boinc   1516240 Dec 16 13:28 agis_ddmendpoints.agis.ALL.json
[2025-12-16 14:42:21] drwx------ 5 boinc boinc      4096 Dec 16 13:28 pilot3
[2025-12-16 14:42:21] -rw------- 1 boinc boinc 147329861 Dec 16 14:41 HITS.47886831._009261.pool.root.1
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc       529 Dec 16 14:41 boinc_task_state.xml
[2025-12-16 14:42:21] -rw------- 1 boinc boinc      1023 Dec 16 14:41 memory_monitor_summary.json
[2025-12-16 14:42:21] -rw------- 1 boinc boinc    274410 Dec 16 14:41 log.47886831._009261.job.log.tgz.1
[2025-12-16 14:42:21] -rw------- 1 boinc boinc      7763 Dec 16 14:41 heartbeat.json
[2025-12-16 14:42:21] -rw------- 1 boinc boinc        95 Dec 16 14:41 pilot_heartbeat.json
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc      8192 Dec 16 14:42 boinc_mmap_file
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc        27 Dec 16 14:42 wrapper_checkpoint.txt
[2025-12-16 14:42:21] -rw------- 1 boinc boinc      4752 Dec 16 14:42 pilotlog.txt
[2025-12-16 14:42:21] -rw------- 1 boinc boinc    650849 Dec 16 14:42 log.47886831._009261.job.log.1
[2025-12-16 14:42:21] -rw------- 1 boinc boinc       357 Dec 16 14:42 output.list
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc       620 Dec 16 14:42 runtime_log
[2025-12-16 14:42:21] -rw------- 1 boinc boinc    942080 Dec 16 14:42 result.tar.gz
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc      8902 Dec 16 14:42 runtime_log.err
[2025-12-16 14:42:21] -rw------- 1 boinc boinc       659 Dec 16 14:42 0JZKDmuTSp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIZYKDmu6llNo.diag
[2025-12-16 14:42:21] -rw-r--r-- 1 boinc boinc      6933 Dec 16 14:42 stderr.txt
[2025-12-16 14:42:21] HITS file was successfully produced:
[2025-12-16 14:42:21] -rw------- 1 boinc boinc 147329861 Dec 16 14:41 shared/HITS.pool.root.1
[2025-12-16 14:42:21]  *** Contents of shared directory: ***
[2025-12-16 14:42:21] total 333732
[2025-12-16 14:42:21] -rw-r--r-- 2 boinc boinc 192845369 Dec 16 13:28 ATLAS.root_0
[2025-12-16 14:42:21] -rw-r--r-- 2 boinc boinc    592411 Dec 16 13:28 input.tar.gz
[2025-12-16 14:42:21] -rw-r--r-- 2 boinc boinc     15847 Dec 16 13:28 start_atlas.sh
[2025-12-16 14:42:21] -rw------- 1 boinc boinc 147329861 Dec 16 14:41 HITS.pool.root.1
[2025-12-16 14:42:21] -rw------- 1 boinc boinc    942080 Dec 16 14:42 result.tar.gz
14:42:23 (1423485): run_atlas exited; CPU time 16466.532703
14:42:23 (1423485): called boinc_finish(0)

</stderr_txt>
]]>

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