Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:25 (3061600): wrapper (7.7.26015): starting
00:03:25 (3061600): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 00:03:25] Arguments: --nthreads 9
[2025-12-16 00:03:25] Threads: 9
[2025-12-16 00:03:25] Checking for CVMFS
[2025-12-16 00:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 00:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 00:03:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 00:03:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 00:03:29] 2.13.3.0 42195 58264 333676 154058 2 26 16928435 32935936 19930 16776704 0 285736374 99.721 212841072 33233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 00:03:29] CVMFS is ok
[2025-12-16 00:03:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 00:03:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 00:03:29] Further information can be found at the LHC@home message board.
[2025-12-16 00:03:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 00:03:29] Checking for apptainer binary...
[2025-12-16 00:03:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 00:03:29] Running /usr/bin/apptainer --version
[2025-12-16 00:03:29] apptainer version 1.4.5-2.el9
[2025-12-16 00:03:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 00:03:31] c-6-3.aglt2.org
[2025-12-16 00:03:31] apptainer works
[2025-12-16 00:03:32] Set ATHENA_PROC_NUMBER=9
[2025-12-16 00:03:32] Set ATHENA_CORE_NUMBER=9
[2025-12-16 00:03:32] Starting ATLAS job with PandaID=6931593258
[2025-12-16 00:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 16:23:26]  *** The last 200 lines of the pilot log: ***
[2025-12-16 16:23:26] 2025-12-16 21:22:06,685 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.211225
[2025-12-16 16:23:26] 2025-12-16 21:22:06,725 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931593258/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 16:23:26] 2025-12-16 21:22:06,726 | INFO     | extracted standard info from prmon json
[2025-12-16 16:23:26] 2025-12-16 21:22:06,726 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 16:23:26] 2025-12-16 21:22:06,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 16:23:26] 2025-12-16 21:22:06,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 16:23:26] 2025-12-16 21:22:06,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 16:23:26] 2025-12-16 21:22:06,893 | INFO     | fitting pss+swap vs Time
[2025-12-16 16:23:26] 2025-12-16 21:22:06,967 | INFO     | sum of square deviations: 271778373851.7934
[2025-12-16 16:23:26] 2025-12-16 21:22:07,266 | INFO     | sum of deviations: 1123117211171.6555
[2025-12-16 16:23:26] 2025-12-16 21:22:07,319 | INFO     | mean x: 1765890872.137931
[2025-12-16 16:23:26] 2025-12-16 21:22:07,319 | INFO     | mean y: 2520036.866248694
[2025-12-16 16:23:26] 2025-12-16 21:22:07,319 | INFO     | intersect: -7294979037.252772
[2025-12-16 16:23:26] 2025-12-16 21:22:07,321 | INFO     | chi2: 7.8831000274594585
[2025-12-16 16:23:26] 2025-12-16 21:22:07,322 | INFO     | sum of square deviations: 267540790471.69733
[2025-12-16 16:23:26] 2025-12-16 21:22:07,524 | INFO     | time since job start (58614s) is within the limit (174528.0s)
[2025-12-16 16:23:26] 2025-12-16 21:22:07,628 | INFO     | sum of deviations: 1240511511340.017
[2025-12-16 16:23:26] 2025-12-16 21:22:07,644 | INFO     | mean x: 1765890719.6386554
[2025-12-16 16:23:26] 2025-12-16 21:22:07,645 | INFO     | mean y: 2524247.4506302522
[2025-12-16 16:23:26] 2025-12-16 21:22:07,645 | INFO     | intersect: -8185415100.4821825
[2025-12-16 16:23:26] 2025-12-16 21:22:07,646 | INFO     | chi2: 6.496581005919692
[2025-12-16 16:23:26] 2025-12-16 21:22:07,646 | INFO     | current chi2=6.496581005919692 (change=17.58849966015983 %)
[2025-12-16 16:23:26] 2025-12-16 21:22:07,647 | INFO     | right removable region: 951
[2025-12-16 16:23:26] 2025-12-16 21:22:07,648 | INFO     | sum of square deviations: 267540709951.6972
[2025-12-16 16:23:26] 2025-12-16 21:22:07,675 | INFO     | sum of deviations: 801590810842.5114
[2025-12-16 16:23:26] 2025-12-16 21:22:07,676 | INFO     | mean x: 1765891024.6386554
[2025-12-16 16:23:26] 2025-12-16 21:22:07,676 | INFO     | mean y: 2531603.556722689
[2025-12-16 16:23:26] 2025-12-16 21:22:07,676 | INFO     | intersect: -5288334293.282591
[2025-12-16 16:23:26] 2025-12-16 21:22:07,677 | INFO     | chi2: 3.927681419480284
[2025-12-16 16:23:26] 2025-12-16 21:22:07,678 | INFO     | current chi2=3.927681419480284 (change=50.17592817801545 %)
[2025-12-16 16:23:26] 2025-12-16 21:22:07,679 | INFO     | sum of square deviations: 263347383778.87866
[2025-12-16 16:23:26] 2025-12-16 21:22:07,711 | INFO     | monitor loop #3640: job 0:6931593258 is in state 'finished'
[2025-12-16 16:23:26] 2025-12-16 21:22:07,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 16:23:26] 2025-12-16 21:22:07,877 | INFO     | sum of deviations: 606806379302.5398
[2025-12-16 16:23:26] 2025-12-16 21:22:07,885 | INFO     | mean x: 1765891177.1383317
[2025-12-16 16:23:26] 2025-12-16 21:22:07,885 | INFO     | mean y: 2538683.125659979
[2025-12-16 16:23:26] 2025-12-16 21:22:07,885 | INFO     | intersect: -4066436736.5859265
[2025-12-16 16:23:26] 2025-12-16 21:22:07,886 | INFO     | chi2: 2.5162333131262016
[2025-12-16 16:23:26] 2025-12-16 21:22:07,887 | INFO     | current chi2=2.5162333131262016 (change=35.93591118041461 %)
[2025-12-16 16:23:26] 2025-12-16 21:22:07,888 | INFO     | sum of square deviations: 259198047421.28177
[2025-12-16 16:23:26] 2025-12-16 21:22:08,010 | INFO     | sum of deviations: 488055787225.10583
[2025-12-16 16:23:26] 2025-12-16 21:22:08,010 | INFO     | mean x: 1765891329.6390657
[2025-12-16 16:23:26] 2025-12-16 21:22:08,010 | INFO     | mean y: 2543047.0297239916
[2025-12-16 16:23:26] 2025-12-16 21:22:08,010 | INFO     | intersect: -3322534019.003064
[2025-12-16 16:23:26] 2025-12-16 21:22:08,058 | INFO     | chi2: 2.0394979728279874
[2025-12-16 16:23:26] 2025-12-16 21:22:08,058 | INFO     | current chi2=2.0394979728279874 (change=18.94638854875949 %)
[2025-12-16 16:23:26] 2025-12-16 21:22:08,058 | INFO     | left removable region: 30
[2025-12-16 16:23:26] 2025-12-16 21:22:08,059 | INFO     | sum of square deviations: 242246680772.93146
[2025-12-16 16:23:26] 2025-12-16 21:22:08,201 | INFO     | sum of deviations: 407349952929.0373
[2025-12-16 16:23:26] 2025-12-16 21:22:08,202 | INFO     | mean x: 1765891604.1400652
[2025-12-16 16:23:26] 2025-12-16 21:22:08,203 | INFO     | mean y: 2554930.4028230184
[2025-12-16 16:23:26] 2025-12-16 21:22:08,203 | INFO     | intersect: -2966880438.2431693
[2025-12-16 16:23:26] 2025-12-16 21:22:08,204 | INFO     | chi2: 0.17372178315883197
[2025-12-16 16:23:26] 2025-12-16 21:22:08,204 | INFO     | current memory leak: 1.68 B/s (using 921 data points, chi2=0.17)
[2025-12-16 16:23:26] 2025-12-16 21:22:08,205 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2025-12-16 16:23:26] 2025-12-16 21:22:08,206 | INFO     | ..............................
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . Timing measurements:
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . get job = 0 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . initial setup = 7 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . payload setup = 57 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . stage-in = 0 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . payload execution = 58406 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . stage-out = 7 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | . log creation = 1 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,207 | INFO     | ..............................
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | 
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | job summary report
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | --------------------------------------------------
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | PanDA job id: 6931593258
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | task id: 47898878
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | errors: (none)
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 16:23:26] 2025-12-16 21:22:08,625 | INFO     | pilot state: finished 
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | transexitcode: 0
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | exeerrorcode: 0
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | exeerrordiag: 
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | exitcode: 0
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | exitmsg: OK
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | cpuconsumptiontime: 48500 s
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | nevents: 400
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | neventsw: 0
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | pid: 3086064
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | pgrp: 3086064
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | corecount: 9
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | event service: False
[2025-12-16 16:23:26] 2025-12-16 21:22:08,626 | INFO     | sizes: {0: 2283067, 1: 2283752, 3: 2283951, 15: 2283951, 26: 2283979, 37: 2284007, 44: 2284425, 48: 2284453, 58465: 2335793, 58466: 2335792, 58475: 2344846, 58477:
[2025-12-16 16:23:26] 2025-12-16 21:22:08,627 | INFO     | --------------------------------------------------
[2025-12-16 16:23:26] 2025-12-16 21:22:08,627 | INFO     | 
[2025-12-16 16:23:26] 2025-12-16 21:22:08,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 16:23:26] 2025-12-16 21:22:08,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,903 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 16:23:26] 2025-12-16 21:22:08,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 16:23:26] 2025-12-16 21:22:08,905 | INFO     | job 6931593258 has completed (purged errors)
[2025-12-16 16:23:26] 2025-12-16 21:22:08,905 | INFO     | overall cleanup function is called
[2025-12-16 16:23:26] 2025-12-16 21:22:09,925 | INFO     | --- collectZombieJob: --- 10, [3086064]
[2025-12-16 16:23:26] 2025-12-16 21:22:09,925 | INFO     | zombie collector waiting for pid 3086064
[2025-12-16 16:23:26] 2025-12-16 21:22:09,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 16:23:26] 2025-12-16 21:22:09,925 | INFO     | collected zombie processes
[2025-12-16 16:23:26] 2025-12-16 21:22:09,925 | INFO     | will attempt to kill all subprocesses of pid=3086064
[2025-12-16 16:23:26] 2025-12-16 21:22:11,758 | INFO     | process IDs to be killed: [3086064] (in reverse order)
[2025-12-16 16:23:26] 2025-12-16 21:22:12,147 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 16:23:26] 2025-12-16 21:22:12,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 16:23:26] 2025-12-16 21:22:12,192 | INFO     | did not find any defunct processes belonging to 3086064
[2025-12-16 16:23:26] 2025-12-16 21:22:12,321 | INFO     | did not find any defunct processes belonging to 3086064
[2025-12-16 16:23:26] 2025-12-16 21:22:12,321 | INFO     | ready for new job
[2025-12-16 16:23:26] 2025-12-16 21:22:12,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 16:23:26] 2025-12-16 21:22:12,327 | INFO     | ***************************************
[2025-12-16 16:23:26] 2025-12-16 21:22:12,327 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 16:23:26] 2025-12-16 21:22:12,327 | INFO     | ***************************************
[2025-12-16 16:23:26] 2025-12-16 21:22:12,328 | INFO     | 
[2025-12-16 16:23:26] 2025-12-16 21:22:12,329 | INFO     | architecture information:
[2025-12-16 16:23:26] 2025-12-16 21:22:12,330 | INFO     | executing command: cat /etc/os-release
[2025-12-16 16:23:26] 2025-12-16 21:22:12,467 | INFO     | cat /etc/os-release:
[2025-12-16 16:23:26] NAME="CentOS Linux"
[2025-12-16 16:23:26] VERSION="7 (Core)"
[2025-12-16 16:23:26] ID="centos"
[2025-12-16 16:23:26] ID_LIKE="rhel fedora"
[2025-12-16 16:23:26] VERSION_ID="7"
[2025-12-16 16:23:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 16:23:26] ANSI_COLOR="0;31"
[2025-12-16 16:23:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 16:23:26] HOME_URL="https://www.centos.org/"
[2025-12-16 16:23:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 16:23:26] 
[2025-12-16 16:23:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 16:23:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 16:23:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 16:23:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 16:23:26] 
[2025-12-16 16:23:26] 2025-12-16 21:22:12,467 | INFO     | ***************************************
[2025-12-16 16:23:26] 2025-12-16 21:22:12,977 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 16:23:26] 2025-12-16 21:22:13,170 | INFO     | sufficient remaining disk space (75804704768 B)
[2025-12-16 16:23:26] 2025-12-16 21:22:13,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 16:23:26] 2025-12-16 21:22:13,195 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 16:23:26] 2025-12-16 21:22:13,195 | INFO     | update_server=False
[2025-12-16 16:23:26] 2025-12-16 21:22:13,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 16:23:26] 2025-12-16 21:22:13,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 16:23:26] 2025-12-16 21:22:13,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 16:23:26] 2025-12-16 21:22:13,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 16:23:26] 2025-12-16 21:22:13,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 16:23:26] 2025-12-16 21:22:13,743 | INFO     | aborting loop
[2025-12-16 16:23:26] 2025-12-16 21:22:14,030 | INFO     | all data control threads have been joined
[2025-12-16 16:23:26] 2025-12-16 21:22:14,219 | INFO     | [job] retrieve thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,232 | INFO     | [payload] validate_post thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,525 | INFO     | [payload] failed_post thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,542 | INFO     | all payload control threads have been joined
[2025-12-16 16:23:26] 2025-12-16 21:22:14,581 | INFO     | all job control threads have been joined
[2025-12-16 16:23:26] 2025-12-16 21:22:14,640 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,654 | INFO     | [job] queue monitor thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,733 | INFO     | [job] validate thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:14,748 | INFO     | [job] job monitor thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,036 | INFO     | [data] control thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,208 | INFO     | [data] copytool_out thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,247 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,247 | INFO     | [data] copytool_in thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,248 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,548 | INFO     | [payload] control thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:15,587 | INFO     | [job] control thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:17,209 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 16:23:26] 2025-12-16 21:22:45,649 | INFO     | PID=3070561 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 16:23:26] 2025-12-16 21:22:45,649 | INFO     | .. there are 33 such processes running
[2025-12-16 16:23:26] 2025-12-16 21:22:45,650 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 16:23:26] 2025-12-16 21:22:45,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 16:23:26] 2025-12-16 21:22:45,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 16:23:26] 2025-12-16 21:22:57,271 | INFO     | [monitor] cgroup control has ended
[2025-12-16 16:23:26] 2025-12-16 21:22:58,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727555422016)>', '<ExcThread(monitor, started 139726652679936)>']
[2025-12-16 16:23:26] 2025-12-16 21:22:58,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 16:23:26] 2025-12-16 21:22:58,750 | INFO     | [monitor] control thread has ended
[2025-12-16 16:23:26] 2025-12-16 21:23:03,214 | INFO     | all workflow threads have been joined
[2025-12-16 16:23:26] 2025-12-16 21:23:03,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 16:23:26] 2025-12-16 21:23:03,214 | INFO     | traces error code: 0
[2025-12-16 16:23:26] 2025-12-16 21:23:03,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 16:23:26] 2025-12-16 21:23:05,091 [wrapper] ==== pilot stdout END ====
[2025-12-16 16:23:26] 2025-12-16 21:23:05,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 16:23:26] 2025-12-16 21:23:05,171 [wrapper] pilotpid: 3070561
[2025-12-16 16:23:26] 2025-12-16 21:23:05,249 [wrapper] Pilot exit status: 0
[2025-12-16 16:23:26] 2025-12-16 21:23:05,416 [wrapper] pandaids: 6931593258
[2025-12-16 16:23:26] 2025-12-16 21:23:05,678 [wrapper] cleanup supervisor_pilot 2642576 3070562
[2025-12-16 16:23:26] 2025-12-16 21:23:05,733 [wrapper] Test setup, not cleaning
[2025-12-16 16:23:26] 2025-12-16 21:23:05,782 [wrapper] apfmon messages muted
[2025-12-16 16:23:26] 2025-12-16 21:23:05,834 [wrapper] ==== wrapper stdout END ====
[2025-12-16 16:23:26] 2025-12-16 21:23:05,883 [wrapper] ==== wrapper stderr END ====
[2025-12-16 16:23:26]  *** Error codes and diagnostics ***
[2025-12-16 16:23:26]     "exeErrorCode": 0,
[2025-12-16 16:23:26]     "exeErrorDiag": "",
[2025-12-16 16:23:26]     "pilotErrorCode": 0,
[2025-12-16 16:23:26]     "pilotErrorDiag": "",
[2025-12-16 16:23:26]  *** Listing of results directory ***
[2025-12-16 16:23:26] total 394160
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 05:33 pilot3.tar.gz
[2025-12-16 16:23:26] -rwx------. 1 boincer umatlas     36322 Dec 15 05:37 runpilot2-wrapper.sh
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 05:38 queuedata.json
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas       100 Dec 16 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 16:23:26] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 00:03 run_atlas
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas       105 Dec 16 00:03 job.xml
[2025-12-16 16:23:26] -rw-r--r--. 2 boincer umatlas 199172021 Dec 16 00:03 EVNT.47898875._000147.pool.root.1
[2025-12-16 16:23:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:03 start_atlas.sh
[2025-12-16 16:23:26] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 00:03 shared
[2025-12-16 16:23:26] -rw-r--r--. 2 boincer umatlas    592394 Dec 16 00:03 input.tar.gz
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas         0 Dec 16 00:03 boinc_lockfile
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas      2501 Dec 16 00:03 pandaJob.out
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas        57 Dec 16 00:03 setup.sh.local
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas    994531 Dec 16 00:05 agis_schedconf.cvmfs.json
[2025-12-16 16:23:26] drwx------. 5 boincer umatlas      4096 Dec 16 00:05 pilot3
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas 183364201 Dec 16 16:18 HITS.47898878._003710.pool.root.1
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas      6659 Dec 16 16:18 init_data.xml
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas       531 Dec 16 16:18 boinc_task_state.xml
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas      1054 Dec 16 16:21 memory_monitor_summary.json
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas   1516240 Dec 16 16:21 agis_ddmendpoints.agis.ALL.json
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas   1076424 Dec 16 16:21 log.47898878._003710.job.log.tgz.1
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas      7839 Dec 16 16:22 heartbeat.json
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas        95 Dec 16 16:22 pilot_heartbeat.json
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas      4824 Dec 16 16:23 pilotlog.txt
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas   7505667 Dec 16 16:23 log.47898878._003710.job.log.1
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas       357 Dec 16 16:23 output.list
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas       620 Dec 16 16:23 runtime_log
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas   8601600 Dec 16 16:23 result.tar.gz
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas      9328 Dec 16 16:23 runtime_log.err
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas       658 Dec 16 16:23 8waNDmH8Kp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9NTKDmzsaCMn.diag
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 16:23 boinc_mmap_file
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas        28 Dec 16 16:23 wrapper_checkpoint.txt
[2025-12-16 16:23:26] -rw-r--r--. 1 boincer umatlas     21260 Dec 16 16:23 stderr.txt
[2025-12-16 16:23:26] HITS file was successfully produced:
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas 183364201 Dec 16 16:18 shared/HITS.pool.root.1
[2025-12-16 16:23:26]  *** Contents of shared directory: ***
[2025-12-16 16:23:26] total 382576
[2025-12-16 16:23:26] -rw-r--r--. 2 boincer umatlas 199172021 Dec 16 00:03 ATLAS.root_0
[2025-12-16 16:23:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 00:03 start_atlas.sh
[2025-12-16 16:23:26] -rw-r--r--. 2 boincer umatlas    592394 Dec 16 00:03 input.tar.gz
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas 183364201 Dec 16 16:18 HITS.pool.root.1
[2025-12-16 16:23:26] -rw-------. 1 boincer umatlas   8601600 Dec 16 16:23 result.tar.gz
16:23:28 (3061600): run_atlas exited; CPU time 51394.274704
16:23:28 (3061600): called boinc_finish(0)

</stderr_txt>
]]>

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